cluster # 4226

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4226 cluster # 4226 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4226#0 length = 2069 sequences # 3
consensusID : consensus_4226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2069
fasta sequence
                              [CCCTCTCTCTCCTCTCTCTCTCTCCCCCCTCCTTCTTCCCCCTCTCCAAACCCTCGGCTTCGGTCGCGAGCGCGAGCGCGAGGCCGCGCGATTTCGCGTCTCGCGGCGGAGGAGAACCGGAGCGCGCGCGCGCCCTTCCCTTCGTCGCCCGCTTCGCGTGCCCCGCGGCGCGGGGGGCGTGGTGGTGGTGGTGGTCGCCGCCGCGCGATCTCCAAAAACCCTAAAAGCCCTGGCGCGGGCGCGGCGGTAGGGTTTGGGCGGTGGTGGGGTGGGGGGCTGCCATGGCGCCCATCAACAGCTCCAACATGGAGCAGCACTCGCAGAAGCTCCTCGAGCCGGACCTTCCTGTGCAAGTCCGACTGCAGCTTGCCATGGAAGTTCGGGACAGCCTGGAGATGACTCATACTCCAGACTATCTTAACTTTCTTAGATGCTACTTCAGAGCATTCTCGGCCATCCTCAGCAACTTCACCGCACCACAGGGCACTGAGAATGCGGAGCACAAGCTGCGGAATGTGGTGATTGAGATCCTCAATCGGCTACCCCACAGTGAGGTGCTCCGACCCTTTGTGCAAGACCTGCTCAAGCTCTCTCTTCGTGTATTGACACAGGACAATGAGGACAATGCACTTCTTGCCATCAGGATTGTATTTGATCTCCTCCGTAACTTTCGCCCTACTGTCGAGGCAGAGGTGCAGCCGTTCCTTGATTTTGTTGTTACCATATACCGCAACTTTCCCAATACTGTCACCCATTTCTTCGATAATCCCAATGTCAGTGCCAATATTGCTGCTGCCGTGCCCAACCAGCATTTGGACCCCACTGCTGATGCCCCAGGCACGGTGGCAGTGCCAGGCGGTGGACAACTCAATCCAAGTGCACGGTCATTCAAGATAGTCACAGAGAGCCCTCTAGTAGTGATGTTTTTGTTCCAGTTGTATGCTAAGCTTGTGCAGACAAATATCCCATACTTGCTACCACTCATGGTGTCTGCAATCTCTATTAAGGGGCCAGACAAAGTGCCACCACACCTGAAGACGCCCTTTGTTGAGTTAAAGGGTGCACAAGTCAAGACATTGTCATTCCTGACGTACCTTCTGAAGAGCAACGCGGATCATATAAAGTCATATGAGGAAAGCATATGCAAGAGCATTGTGAACTTGCTTGTTACATGCCCCCCGGACTCTGTTTCCATAAGGAAGGAGCTGCTAGTTGGCTTGAAGCAAGTTCTCAACACTGAGTACAGGCGTGGTTTATTTCCCTTGATTGACACACTTCTTGATGAGAGGGTTTTGATAGGCACAGGCCGAGTTTGCATCGAGACATTGAGACCTCTTGCCTATACCCTTCTTGCCGAGCTGGTGCATTATGTTCGTGGAGACCTTTCTCTTCCGCAGCTATCGCGGATCATTTATTTGTTCTCTCGGAATATGCATGATTCTTCGCTAACCCTTGTCATTCATACGACATCGGCTCGTTTGATGTTGAATCTGGTTGAGCCTATATATGAAAAAGGTATTGATCAGCCAAGCATGGATGAAGCACGGATTTTGTTGGGGCGTATACTGGATGCATTTGTTGGGAAGTTCAGGACATTGAAGCGCACAATTCCTCAGTTGCTTGAAGAAGGCGAGGAAGGGAAGGAACACCAAAATTTGAGAATGAAACTTGAAGTCCCATTACAGACTGTGCTGAATTTGCAACCACCCTTGGAGTACACAAAGGAGATTAATGATTACAAAAGTCTGATAAGGACACTCGTACTAGGAATGAAGACAATAATCTGGAGCATAACCCATGCTCATTGGCCACGCCCACAGCAACAAAGTCAACAATCATCAAATTTATCAGTACAACCATTCAGGGGACTGCGGGAGGATGAGGTGCGGAAGACTTCGGGTGTTCTAAAATCTGGGGTTCACTGTTTGGCTCTTTTTAAGGAAAAGGATGAGGAGAGAGACATTCTGCAATGTTTTTCCCAAATGCTAGCTATAATGGAAGCTCGGGATATAATGGACATGTTTTCCTTTTGCATGCCAGACCTCTTTGATTGCATGATAACAAACAAC]

[+] EMBL AK069294             [CCCTCTCTCTCCTCTCTCTCTCTCCCCCCTCCTTCTTCCCCCTCTCCAAACCCTCGGCTTCGGTCGCGAGCGCGAGCGCGAGGCCGCGCGATTTCGCGTCTCGCGGCGGAGGAGAACCGGAGCGCGCGCGCGCCCTTCCCTTCGTCGCCCGCTTCGCGTGCCCCGCGGCGCGGGGGGCGTGGTGGTGGTGGTGGTCGCCGCCGCGCGATCTCCAAAAACCCTAAAAGCCCTGGCGCGGGCGCGGCGGTAGGGTTTGGGCGGTGGTGGGGTGGGGGGCTGCCATGGCGCCCATCAACAGCTCCAACATGGAGCAGCACTCGCAGAAGCTCCTCGAGCCGGACCTTCCTGTGCAAGTCCGACTGCAGCTTGCCATGGAAGTTCGGGACAGCCTGGAGATGACTCATACTCCAGACTATCTTAACTTTCTTAGATGCTACTTCAGAGCATTCTCGGCCATCCTCAGCAACTTCACCGCACCACAGGGCACTGAGAATGCGGAGCACAAGCTGCGGAATGTGGTGATTGAGATCCTCAATCGGCTACCCCACAGTGAGGTGCTCCGACCCTTTGTGCAAGACCTGCTCAAGCTCTCTCTTCGTGTATTGACACAGGACAATGAGGACAATGCACTTCTTGCCATCAGGATTGTATTTGATCTCCTCCGTAACTTTCGCCCTACTGTCGAGGCAGAGGTGCAGCCGTTCCTTGATTTTGTTGTTACCATATACCGCAACTTTCCCAATACTGTCACCCATTTCTTCGATAATCCCAATGTCAGTGCCAATATTGCTGCTGCCGTGCCCAACCAGCATTTGGACCCCACTGCTGATGCCCCAGGCACGGTGGCAGTGCCAGGCGGTGGACAACTCAATCCAAGTGCACGGTCATTCAAGATAGTCACAGAGAGCCCTCTAGTAGTGATGTTTTTGTTCCAGTTGTATGCTAAGCTTGTGCAGACAAATATCCCATACTTGCTACCACTCATGGTGTCTGCAATCTCTATTAAGGGGCCAGACAAAGTGCCACCACACCTGAAGACGCCCTTTGTTGAGTTAAAGGGTGCACAAGTCAAGACATTGTCATTCCTGACGTACCTTCTGAAGAGCAACGCGGATCATATAAAGTCATATGAGGAAAGCATATGCAAGAGCATTGTGAACTTGCTTGTTACATGCCCCCCGGACTCTGTTTCCATAAGGAAGGAGCTGCTAGTTGGCTTGAAGCAAGTTCTCAACACTGAGTACAGGCGTGGTTTATTTCCCTTGATTGACACACTTCTTGATGAGAGGGTTTTGATAGGCACAGGCCGAGTTTGCATCGAGACATTGAGACCTCTTGCCTATACCCTTCTTGCCGAGCTGGTGCATTATGTTCGTGGAGACCTTTCTCTTCCGCAGCTATCGCGGATCATTTATTTGTTCTCTCGGAATATGCATGATTCTTCGCTAACCCTTGTCATTCATACGACATCGGCTCGTTTGATGTTGAATCTGGTTGAGCCTATATATGAAAAAGGTATTGATCAGCCAAGCATGGATGAAGCACGGATTTTGTTGGGGCGTATACTGGATGCATTTGTTGGGAAGTTCAGGACATTGAAGCGCACAATTCCTCAGTTGCTTGAAGAAGGCGAGGAAGGGAAGGAACACCAAAATTTGAGAATGAAACTTGAAGTCCCATTACAGACTGTGCTGAATTTGCAACCACCCTTGGAGTACACAAAGGAGATTAATGATTACAAAAGTCTGATAAGGACACTCGTACTAGGAATGAAGACAATAATCTGGAGCATAACCCATGCTCATTGGCCACGCCCACAGCAACAAAGTCAACAATCATCAAATTTATCAGTACAACCATTCAGGGGACTGCGGGAGGATGAGGTGCGGAAGACTTCGGGTGTTCTAAAATCTGGGGTTCACTGTTTGGCTCTTTTTAAGGAAAAGGATGAGGAGAGAGACATTCTGCAATGTTTTTCCCAAATGCTAGCTATAATGGAAGCTCGGGATATAATGGACATGTTTTCCTTTTGCATGCCAGACCTCTTTGATTGCATGATAACAAACAAC]
[+] EMBL OSC245               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGTTTTTGTTCCAGTTGTATGCTAAGCTTGTGCAGACAAATATCCCATACTTGCTACCACTCATGGTGTCTGCAATCTCTATTAAGGGGCCAGACAAAGTGCCACCACACCTGAAGACGCCCTTTGTTGAGTTAAAGGGTGCACAAGTCAAGACATTGTCATTCCTGACGTACCTTCTGAAGAGCAACGCGNATCATATAAAGTCATATGAGGAAAGCATATGCAAGAGCATTGTGAACTTGCTTGTTACATGCCCCCCGGACTCTGTTTCCATAAGGAAGGAGCTGCTAGTTGGCTTGAAGCAAGTTCTCAACACTGAGTACAGGCGTGGTTTATTTCCCTTGATTGACACACTTCTTGATGAGAGGGTTTTGATAGGCACAGGCCGAGTTTTCATCGNGACATTGAGACCTTTTGCCTATACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU101309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAGGACATTGAAGCGCACAATTCCTCAGTTGCTTGAAGAAGGCGAGGAAGGGAAGGAACACCAAAATTTGAGAATGAAACTTGAAGTCCCATTACAGACTGTGCTGAATTTGCAACCACCCTTGGAGTACACAAAGGAGATTAATGATTACAAAAGTCTGATAAGGACACTCGTACTAGGAATGAAGACAATAATCTGGAGCATAACCCATGCTCATTGGCCACGCCCACAGCAACAAAGTCAACAATCATCAAATTTATCAGTACAACCATTCAGGGGACTGCGGGAGGATGAGGTGCGGAAGACTTCGGGTGTTCTAAAATCTGGGGTTCACTGTTTGGCTCTTTTTAAGGAAAAGGATGAGGAGAGAGACATTCTGCAATGTTTTTCCCAAATGCTAGCTATAATGGAAGCTCGGGATATAATGGACATGTTTTCaaaaa                                      ]




>consensus_4226#0
CCCTCTCTCTCCTCTCTCTCTCTCCCCCCTCCTTCTTCCCCCTCTCCAAACCCTCGGCTT
CGGTCGCGAGCGCGAGCGCGAGGCCGCGCGATTTCGCGTCTCGCGGCGGAGGAGAACCGG
AGCGCGCGCGCGCCCTTCCCTTCGTCGCCCGCTTCGCGTGCCCCGCGGCGCGGGGGGCGT
GGTGGTGGTGGTGGTCGCCGCCGCGCGATCTCCAAAAACCCTAAAAGCCCTGGCGCGGGC
GCGGCGGTAGGGTTTGGGCGGTGGTGGGGTGGGGGGCTGCCATGGCGCCCATCAACAGCT
CCAACATGGAGCAGCACTCGCAGAAGCTCCTCGAGCCGGACCTTCCTGTGCAAGTCCGAC
TGCAGCTTGCCATGGAAGTTCGGGACAGCCTGGAGATGACTCATACTCCAGACTATCTTA
ACTTTCTTAGATGCTACTTCAGAGCATTCTCGGCCATCCTCAGCAACTTCACCGCACCAC
AGGGCACTGAGAATGCGGAGCACAAGCTGCGGAATGTGGTGATTGAGATCCTCAATCGGC
TACCCCACAGTGAGGTGCTCCGACCCTTTGTGCAAGACCTGCTCAAGCTCTCTCTTCGTG
TATTGACACAGGACAATGAGGACAATGCACTTCTTGCCATCAGGATTGTATTTGATCTCC
TCCGTAACTTTCGCCCTACTGTCGAGGCAGAGGTGCAGCCGTTCCTTGATTTTGTTGTTA
CCATATACCGCAACTTTCCCAATACTGTCACCCATTTCTTCGATAATCCCAATGTCAGTG
CCAATATTGCTGCTGCCGTGCCCAACCAGCATTTGGACCCCACTGCTGATGCCCCAGGCA
CGGTGGCAGTGCCAGGCGGTGGACAACTCAATCCAAGTGCACGGTCATTCAAGATAGTCA
CAGAGAGCCCTCTAGTAGTGATGTTTTTGTTCCAGTTGTATGCTAAGCTTGTGCAGACAA
ATATCCCATACTTGCTACCACTCATGGTGTCTGCAATCTCTATTAAGGGGCCAGACAAAG
TGCCACCACACCTGAAGACGCCCTTTGTTGAGTTAAAGGGTGCACAAGTCAAGACATTGT
CATTCCTGACGTACCTTCTGAAGAGCAACGCGGATCATATAAAGTCATATGAGGAAAGCA
TATGCAAGAGCATTGTGAACTTGCTTGTTACATGCCCCCCGGACTCTGTTTCCATAAGGA
AGGAGCTGCTAGTTGGCTTGAAGCAAGTTCTCAACACTGAGTACAGGCGTGGTTTATTTC
CCTTGATTGACACACTTCTTGATGAGAGGGTTTTGATAGGCACAGGCCGAGTTTGCATCG
AGACATTGAGACCTCTTGCCTATACCCTTCTTGCCGAGCTGGTGCATTATGTTCGTGGAG
ACCTTTCTCTTCCGCAGCTATCGCGGATCATTTATTTGTTCTCTCGGAATATGCATGATT
CTTCGCTAACCCTTGTCATTCATACGACATCGGCTCGTTTGATGTTGAATCTGGTTGAGC
CTATATATGAAAAAGGTATTGATCAGCCAAGCATGGATGAAGCACGGATTTTGTTGGGGC
GTATACTGGATGCATTTGTTGGGAAGTTCAGGACATTGAAGCGCACAATTCCTCAGTTGC
TTGAAGAAGGCGAGGAAGGGAAGGAACACCAAAATTTGAGAATGAAACTTGAAGTCCCAT
TACAGACTGTGCTGAATTTGCAACCACCCTTGGAGTACACAAAGGAGATTAATGATTACA
AAAGTCTGATAAGGACACTCGTACTAGGAATGAAGACAATAATCTGGAGCATAACCCATG
CTCATTGGCCACGCCCACAGCAACAAAGTCAACAATCATCAAATTTATCAGTACAACCAT
TCAGGGGACTGCGGGAGGATGAGGTGCGGAAGACTTCGGGTGTTCTAAAATCTGGGGTTC
ACTGTTTGGCTCTTTTTAAGGAAAAGGATGAGGAGAGAGACATTCTGCAATGTTTTTCCC
AAATGCTAGCTATAATGGAAGCTCGGGATATAATGGACATGTTTTCCTTTTGCATGCCAG
ACCTCTTTGATTGCATGATAACAAACAAC
clustalw multiple alignements is not computed in this case