These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4230#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1348 fasta sequence [AATCACAAGCAACATCACCACAGATCGATCGAGACAGCTACTGACATCAACGTGAAAAAGGGAAGAAGAACTAACCATGTCCATGCAGGAGATGCTCCGCATTGGAGACGACGACGGCCGGAGCGATGCTCTGGAACGCGAGCTCAAGGAGAAGCTGAGGTTGCGCGGCGATGCCTCACCGGCGAAATGCACCAGGCAGGAGCAGCGGTGGCGGTCTGATCATGGCATCGTCGACGCCCGCGAGAGGTTCGTGCAGGCGTACGGCCGCCTCAGGGACGATCTCGTCGGCGACGACTCGTGCGAGCTCACCGACGAAGCCAGGCGCTGGCTTGCTCAGATGATCGACTACAATGTACCTGGAGGAAAGTTGAACCGAGGGCTGTCAGTGATAGACAGTTACCTGCTGTTGAAACAAGGAAGTGAGGTTACTGAAGATGACTTCTTCCTTGCTTGTGTGCTTGGTTGGTGTGTAGAATGGTTTCAAGCATGTGCACTACTACTTGATGACATCATGGACGATTCACATACCAGGAGAGATCAGATTTGCTGGTACCGGCGACCTGAGGTTGGCCTCAGGGGTATAAACGATGGTATCATACTAAAATGTCACATCTTGATAATGATAAAAAAGTATTTCAGAGAAAAGCCTTACTTTCTTGATCTCTTAGAAATATGGAGCGAGATAGCTC-TGCAGACTTCTCTGGGGC-AGATGCTTGATCTTATTGGCACACATACTGGAGCAGATGATCTTGCAAAATACAGTATTGAAGGCTACCGTCGCATTGTTAAGTACAAGACAGCGTACTACTCCTTTTACCTTCCTGTGGCCAATGCTTTGCTCTTATCTGGCGCAAAACTTGAAGACTTCAGTGGTCTAAAGGATATACTTATTGAAATGGGCATATATTTTCAGATACAGGATGACTACTTGGACTGTTTTGCTGACCCTAACACCATAGGCAAGATTGGAACTGACATCGAAGATCATAAGTGTTCCTGGTTAATAGTACAGGCTCTTGGTCATGCCGACAACAATCAAATAGAAGTACTACATAGGAACTATGGCAAGAAGGATTCAAGTTCTGTTTCCGAAGTAAAGAGGACTTACGCGGCGCTTGATTTGAAAGATATCTTCTCCGAGTTCGAACGTCGATGCTACAACCACCTGGTCACCTCTATCGAAGCTCAGAAGGATCATGCAGCACGGGAGATCCTGAAATCATTTCTGAAGAAAATTCATCAAAGGAAGAAGTAGTTAATAAGTTATAACAATTATGACCTGTATGAGCTTATGGTAACATTTAAAAATGATCGAAATCTATCTCCCCATAAGTTATAATAACACTAT] [+] EMBL AK072747 [AATCACAAGCAACATCACCACAGATCGATCGAGACAGCTACTGACATCAACGTGAAAAAGGGAAGAAGAACTAACCATGTCCATGCAGGAGATGCTCCGCATTGGAGACGACGACGGCCGGAGCGATGCTCTGGAACGCGAGCTCAAGGAGAAGCTGAGGTTGCGCGGCGATGCCTCACCGGCGAAATGCACCAGGCAGGAGCAGCGGTGGCGGTCTGATCATGGCATCGTCGACGCCCGCGAGAGGTTCGTGCAGGCGTACGGCCGCCTCAGGGACGATCTCGTCGGCGACGACTCGTGCGAGCTCACCGACGAAGCCAGGCGCTGGCTTGCTCAGATGATCGACTACAATGTACCTGGAGGAAAGTTGAACCGAGGGCTGTCAGTGATAGACAGTTACCTGCTGTTGAAACAAGGAAGTGAGGTTACTGAAGATGACTTCTTCCTTGCTTGTGTGCTTGGTTGGTGTGTAGAATGGTTTCAAGCATGTGCACTACTACTTGATGACATCATGGACGATTCACATACCAGGAGAGATCAGATTTGCTGGTACCGGCGACCTGAGGTTGGCCTCAGGGGTATAAACGATGGTATCATACTAAAATGTCACATCTTGATAATGATAAAAAAGTATTTCAGAGAAAAGCCTTACTTTCTTGATATCTTAGAAATATGGAGCGAGATAGCTC TGCAGACTTCTCTGGGGC AGATGCTTGATCTTATTAGCACACATACTGGAGCAGATGATCTTGCAAAATACAGTATTGAAGGCTACCGTCGCATTGTTAAGTACAAGACAGCGTACTACTCCTTTTACCTTCCTGTGGCCAATGCTTTGCTCTTATCTGGCGCAAAACTTGAAGACTTCAGTGGTCTAAAGGATATACTTATTGAAATGGGCATATATTTTCAGATACAGGATGACTACTTGGACTGTTTTGCTGACCCTAACACCATAGGCAAGATTGGAACTGACATCGAAGATCATAAGTGTTCCTGGTTAATAGTACAGGCTCTTGGTCATGCTGACAACAATCAAATAGAAGTACTACATAGGAACTATGGCAAGAAGGATTCAAGTTCTGTTTCCGAAGTAAAGAGGACTTACGCGGCGCTTGATTTGAAAGATATCTTCTCCGAGTTCGAACGTCGATGCTACAACCACCTGGTCACCTCTATCGAAGCTCAGAAGGATCATGCAGCACGGGAGATCCTGATATCATTTCTGAAGAAAATTCATCAAAGGAAGAAGTAGTTAATAAGTTATAACAATTATGACCTGTATGAGCTTATGGTAACATTTAAAAATGATCGAAATCTATCTCCCCATAAGTTATAATAACACTAT] [-] EMBL CA763445 [ AGCCCTAC TTCTTGATCTCTTAGAAATATGGAGCGAGATAGCTCTTGCAAACTTCTCTGGGGCAAGATGCTTGATTTTATTGGCACCCATACTGGAGCAGATGATCTTGCAAAATCCAGTATTGAAGGCTACCGTCGCATTGTTAAGTACAAGACAGCGTACTACTCCTTTTACCTTCCTGTGGCCAATGCTTTGCTCTTATCTGGCGCAAAACTTGAAGACTTCAGTGGTCTAAAGGATATACTTATTGAAATGGGCATATATTTTCAGATACAGGATGACTACTTGGACTGTTTTGCTGACCCTAACACCATAGGCAAGATTGGAACTGACATCGAAGATCATAAGTGTTCCTGGTTAATAGTACAGGCTCTTGGTCATGCCGACAACAATCAAATAGAAGTACTACATAGGAACTATGGCAAGAAGGATTCAAGTTCTGTTTCCGAAGTAAAGAGGACTTACGCGGCGCTTGATTTGAAAGATATCTTCTCCGAGTTCGAACGTCGATGCTACAACCACCTGGTCACCTCTATCGAAGCTCAGAAGGATCATGCAGCACGGGAGATCCTGAAATCATTTCTGAAGAAAATTCATCAAAGGAAGAAGTAGTTAATAAGTTATAACAATTATGACCTGTATGAGCTTATGGTAACATTTAAAAATGATCGAAAaaaaaaaaa ] [+] EMBL CA767063 [ TACTTTCTTGATCTCTTAGAAATATGGAGCGAGATAGCTC TGCAGACTTCTCTGGGGC AGATGCTTGATCTTATTGGCACACATACTGGAGCAGATGATCTTGCAAAATACAGTATTGAAGGCTACCGTCGCATTGTTAAGTACAAGACAGCGTACTACTCCTTTTACCTTCCTGTGGCCAATGCTTTGCTCTTATCTGGCGCAAAACTTGAAGACTTCAGTGGTCTAAAGGATATACTTATTGAAATGGGCATATATTTTCAGATACAGGATGACTACTTGGACTGTTTTGCTGACCCTAACACCATAGGCAAGATTGGAACTGACATCGAAGATCATAAGTGTTCCTGGTTAATAGTACAGGCTCTTGGTCATGCCGACAACAATCAAATAGAAGTACTACATAGGAACTATGGCAAGAAGGATTCAAGTTCTGTTTCCGAAGTAAAGAGGACTTACGCGGCGCTTGATTTGAAAGATATCTTCTCCGAGTTCGAACGTCGATGCTACAACCACCTGGTCACCTCTATCGAAGCTCAGAAGGATCATGCAGCACGGGAGATCCTGAAATCATTTCTGAAGAAAATTCATCAAAGGAAGAAGTAGTTAATAAGNTATAACAATTATGACCTGTATGAGCTTATGGTAACATTTAAAAATG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||