cluster # 4232

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Oryza sativa
cluster # 4232 cluster # 4232 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4232#0 length = 1454 sequences # 3
consensusID : consensus_4232#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1454
fasta sequence
                              [AGGTCTCCCCCATATCCCCATTCCCATCTCTCTCTCTCGAGTCTCGACGGCGGCTGCTGCTGCGGCGTCGCCTGCGGTGCGATGTCGTCGTCTCCGGCGCATGCTCAGCGCTTCTACTGCCACCAGTGCGACCGCACCGTCCCCATCCCGCCGCCCACCTCCCCCGACGCCGACGTCCTCTGCCCGTTCTGCGGTGGAGGCTTCGTCGAGGAGCTTGGGGAGGACATCAACCCCAACCCCAACCCCAACCCTAGCCCCTTCCTGCCACACCACCCCTTCTTCCCCTTCGCCTCCCCATCCTTCGACCTCCGCAACCCTAGCGACCTCGCGGCCTTCTTCGGGCCCCCCTCCCCCTCCCCCTCCCCCTCCCCAGCCGCCAGGCGCTTCGACCCCTCCAACTTCCTCCATGATCACTTCACCGGCCTCCTCTCTGGCGGCGCCACCATCCAGATCGTCCTCGAGGGCTCCTCCGCCTCCCTCCCCCTCGGGGGCGCCGCCGCCGGGCCCGGGGGGATCAGCCTCGGCGACTACTTCGTCGGCTCTGGCCTCGAGCAGCTCATCCAGCAGCTCGCCGAGAACGACCCCAACCGCTACGGCACCCCTCCTGCCGCCAAGTCCGCCGTCGCCGCGCTCCCTGACGTCGCCGTCTCCGCCGACATGATGGCCGCCGATGGAGGGGCCCAGTGCGCCGTCTGCATGGACGACTTCCACCTCGGAGCTGCCGCCAAGCAGCTCCCCTGCAAACACGTCTTCCACAAGGATTGCATCCTCCCCTGGCTCGACCTTCACAGCTCCTGCCCCGTTTGCCGCTTCGAGCTTCCCACCGATGACCCTCACCACGCCCACCCAACCCTTGGATCTCACCGCCCCGCCGCACCCGCCTCTGCCTCTGCCTCTCCCTCTCCAGCTCCACCACCTAGGCTGGCTGAGAGAAGGTTCAGGATATCGCTGCCATGGCCTCTCCGTGCTGCGTTTGGCGGCCAGGCGGAGAGCAGCAATCCTACCAATCAGGATCCTGTTGGTGGTTCTACTGATGCTTCCGGTTCTGGCAACAACAATGCAACTGGAGGTCATCGTGGCTACGATGATCTTGACTGAAGAGCATCGGACAAAGAGGGGATGAGGAGGGGCGAGGGACATTGTTTGGAGAAGAGGTGCGCCGCGGCAATGAAGCTAGCCTATTCCGTTCTATTCACCTATCAATGACGAGAAGAAATGTTGGATTTTTTCCCCCTTCCTTAATTGTGGCATGGATTTACTATTGCTGGTTTTGGGGTCCTCTGGTGGTGTAGAGAATTTTCTATGGGGGCCCTTTTCTTGGTGACATGGACATAGACTGGTGGTGAAAAAAAAGAAAGGATGGTGGTGGGGATGTTATACATTTTAAGTACTATATGTTACTTGTCATATATACATATCTGGGAGATCTGAAAGCTTTCCTCTGATTGCTGGCG]

[+] EMBL AK109515             [AGGTCTCCCCCATATCCCCATTCCCATCTCTCTCTCTCGAGTCTCGACGGCGGCTGCTGCTGCGGCGTCGCCTGCGGTGCGATGTCGTCGTCTCCGGCGCATGCTCAGCGCTTCTACTGCCACCAGTGCGACCGCACGGTCCCCATACCGCCGCCCACCTCCCCCGACGCCGACGTCCTCTGCCCGTTCTGCGGTGGAGGCTTCGTCGAGGAGCTTGGGGAGGACATCAACCCCAACCCCAACCCCAACCCTAGCCCCTTCCTGCCACACCACCCCTTCTTCCCCTTCGCCTCCCCATCCTTCGACCTCCGCAACCCTAGCGACCTCGCGGCCTTCTTCGGGCCCCCCTCCCCCTCCCCCTCCCCCTCCCCAGCCGCCAGGCGCTTCGACCCCTCCAACTTCCTCCATGATCACTTCACCGGCCTCCTCTCTGGCGGCGCCACCATCCAGATCGTCCTCGAGGGCTCCTCCGCCTCCCTCCCCCTCGGGGGCGCCGCCGCCGGGCCCGGGGGGATCAGCCTCGGCGACTACTTCGTCGGCTCTGGCCTCGAGCAGCTCATCCAGCAGCTCGCCGAGAACGACCCCAACCGCTACGGCACCCCTCCTGCCGCCAAGTCCGCCGTCGCCGCGCTCCCTGACGTCGCCGTCTCCGCCGACATGATGGCCGCCGATGGAGGGGCCCAGTGCGCCGTCTGCATGGACGACTTCCACCTCGGAGCTGCCGCCAAGCAGCTCCCCTGCAAACACGTCTTCCACAAGGATTGCATCCTCCCCTGGCTCGACCTTCACAGCTCCTGCCCCGTTTGCCGCTTCGAGCTTCCCACCGATGACCCTCACCACGCCCACCCAACCCTTGGATCTCACCGCCCCGCCGCACCCGCCTCTGCCTCTGCCTCTCCCTCTCCAGCTCCACCACCTAGGCTGGCTGAGAGAAGGTTCAGGATATCGCTGCCATGGCCTCTCCGTGCTGCGTTTGGCGGCCAGGCGGAGAGCAGCAATCCTACCAATCAGGATCCTGTTGGTGGTTCTACTGATGCTTCCGGTTCTGGCAACAACAATGCAACTGGAGGTCATCGTGGCTACGATGATCTTGACTGAAGAGCATCGGACAAAGAGGGGATGAGGAGGGGCGAGGGACATTGTTTGGAGAAGAGGTGCGCCGCGGCAATGAAGCTAGCCTATTCCGTTCTATTCACCTATCAATGACGAGAAGAAATGTTGGATTTTTTCCCCCTTCCTTAATTGTGGCATGGATTTACTATTGCTGGTTTTGGGGTCCTCTGGTGGTGTAGAGAATTTTCTATGGGGGCCCTTTTCTTGGTGACATGGACATAGACTGGTGGTGAAAAAAAAGAAAGGATGGTGGTGGGGATGTTATACATTTTAAGTACTATATGTTACTTGTCATATATACATATCTGGGAGATCTGAAAGCTTTCCTCTGATTGCTGGCG]
[+] EMBL AK121897             [  GTCTCCCCCATATCCCCATTCCCATCTCTCTCTCTCGAGTCTCGACGGCGGCTGCTGCTGCGGCGTCGCCTGCGGTGCGATGTCGTCGTCTCCGGCGCATGCTCAGCGCTTCTACTGCCACCAGTGCGACCGCACCGTCCCCATCCCGCCGCCCACCTCCCCCGACGCCGACGTCCTCTGCCCGTTCTGCGGTGGAGGCTTCGTCGAGGAGCTTGGGGAGGACATCAACCCCAACCCCAACCCCAACCCTAGCCCCTTCCTGCCACACCACCCCTTCTTCCCCTTCGCCTCCCCATCCTTCGACCTCCGCAACCCTAGCGACCTCGCGGCCTTCTTCGGGCCCCCCTCCCCCTCCCCCTCCCCCTCCCCAGCCGCCAGGCACTTCGACCCCTCCAACTTCCTCCATGATCACTTCACCGGCCTCCTCTCTGGCGGCGCCACCATCCAGATCGTCCTCGAGGGCTCCTCCGCCTCCCTCCCCCTCGGGGGCGCCGCCGCCGGGCCCGGGGGGATCAGCCTCGGCGACTACTTCGTCGGCTCTGGCCTCGAGCAGCTCATCCAGCAGCTCGCCGAGAACGACCCCAACCGCTACGGCACCCCTCCTGCCGCCAAGTCCGCCGTCGCCGCGCTCCCTGACGTCGCCGTCTCCGCCGACATGATGGCCGCCGATGGAGGGGCCCAGTGCGCCGTCTGCATGGACGACTTCCACCTCGGAGCTGCCGCCAAGCAGCTCCCCTGCAAACACGTCTTCCACAAGGATTGCATCCTCCCCTGGCTCGACCTTCACAGCTCCTGCCCCGTTTGCCGCTTCGAGCTTCCCACCGATGACCCTCACCACGCCCACCCAACCCTTGGATCTCACCGCCCCGCCGCACCCGCCTCTGCCTCTGCCTCTCCCTCTCCAGCTCCACCACCTAGGCTGGCTGAGAGAAGGTTCAGGATATCGCTGCCATGGCCTCTCCGTGCTGCGTTTGGCGGCCAGGCGGAGAGCAGCAATCCTACCAATCAGGATCCTGTTGGTGGTTCTACTGATGCTTCCGGTTCTGGCAACAACAATGCAACTGGAGGTCATCGTGGCTACGATGATCTTGACTGAAGAGCATCGGACAAAGAGGGGATGAGGAGGGGCGAGGGACATTGTTTGGAGAAGAGGTGCGCCGCGGCAATGAAGCTAGCCTATTCCGTTCTATTCACCTATCAATGACGAGAAGAAATGTTGGATTTTTTCCCCCTTCCTTAATTGTGGCATGGATTTACTATTGCTGGTTTTGGGGTCCTCTGGTGGTGTAGAGAATTTTCTATGGGGGCCCTTTTCTTGGTGACATGGACATAGACTGGTGGTGAAAAAAAAGAAAGGATGGTGGTGGGGATGTTATACATTTTAAGTACTATATGTTACTTGTCATATATA                                         ]
[+] EMBL OSC2861              [             ATCCCCATTCCCATCTCTCTCTCTCGAGTCTCGACGGCGGCTGCTGCTGCGGCGTCGCCTGCGGTGCGATGTCGTCGTCTCCGGCGCATGCTCAGCGCTTCTACTGCCACCAGTGCGACCGCACCGTCCCCATCCCGCCGCCCACCTCCCCCGACGCCGACGTCCTCTGCCCGTTCTGCGGTGGAGGCTTCGTCGAGGAGCTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_4232#0
AGGTCTCCCCCATATCCCCATTCCCATCTCTCTCTCTCGAGTCTCGACGGCGGCTGCTGC
TGCGGCGTCGCCTGCGGTGCGATGTCGTCGTCTCCGGCGCATGCTCAGCGCTTCTACTGC
CACCAGTGCGACCGCACCGTCCCCATCCCGCCGCCCACCTCCCCCGACGCCGACGTCCTC
TGCCCGTTCTGCGGTGGAGGCTTCGTCGAGGAGCTTGGGGAGGACATCAACCCCAACCCC
AACCCCAACCCTAGCCCCTTCCTGCCACACCACCCCTTCTTCCCCTTCGCCTCCCCATCC
TTCGACCTCCGCAACCCTAGCGACCTCGCGGCCTTCTTCGGGCCCCCCTCCCCCTCCCCC
TCCCCCTCCCCAGCCGCCAGGCGCTTCGACCCCTCCAACTTCCTCCATGATCACTTCACC
GGCCTCCTCTCTGGCGGCGCCACCATCCAGATCGTCCTCGAGGGCTCCTCCGCCTCCCTC
CCCCTCGGGGGCGCCGCCGCCGGGCCCGGGGGGATCAGCCTCGGCGACTACTTCGTCGGC
TCTGGCCTCGAGCAGCTCATCCAGCAGCTCGCCGAGAACGACCCCAACCGCTACGGCACC
CCTCCTGCCGCCAAGTCCGCCGTCGCCGCGCTCCCTGACGTCGCCGTCTCCGCCGACATG
ATGGCCGCCGATGGAGGGGCCCAGTGCGCCGTCTGCATGGACGACTTCCACCTCGGAGCT
GCCGCCAAGCAGCTCCCCTGCAAACACGTCTTCCACAAGGATTGCATCCTCCCCTGGCTC
GACCTTCACAGCTCCTGCCCCGTTTGCCGCTTCGAGCTTCCCACCGATGACCCTCACCAC
GCCCACCCAACCCTTGGATCTCACCGCCCCGCCGCACCCGCCTCTGCCTCTGCCTCTCCC
TCTCCAGCTCCACCACCTAGGCTGGCTGAGAGAAGGTTCAGGATATCGCTGCCATGGCCT
CTCCGTGCTGCGTTTGGCGGCCAGGCGGAGAGCAGCAATCCTACCAATCAGGATCCTGTT
GGTGGTTCTACTGATGCTTCCGGTTCTGGCAACAACAATGCAACTGGAGGTCATCGTGGC
TACGATGATCTTGACTGAAGAGCATCGGACAAAGAGGGGATGAGGAGGGGCGAGGGACAT
TGTTTGGAGAAGAGGTGCGCCGCGGCAATGAAGCTAGCCTATTCCGTTCTATTCACCTAT
CAATGACGAGAAGAAATGTTGGATTTTTTCCCCCTTCCTTAATTGTGGCATGGATTTACT
ATTGCTGGTTTTGGGGTCCTCTGGTGGTGTAGAGAATTTTCTATGGGGGCCCTTTTCTTG
GTGACATGGACATAGACTGGTGGTGAAAAAAAAGAAAGGATGGTGGTGGGGATGTTATAC
ATTTTAAGTACTATATGTTACTTGTCATATATACATATCTGGGAGATCTGAAAGCTTTCC
TCTGATTGCTGGCG
clustalw multiple alignements is not computed in this case