|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4236#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1400 fasta sequence
[AACGTCACCATGCCCGCCGTTGCCGGGGAAGAGCCGCCCCTGCTGCAGCTGCGGCTTGCGGGAAGCGATGGGCGCCAGCTCCTGCAGGAGCTTCTGCTCGACGCGCGGGTTCGTGGAGAGGAGGTAGAAGAACCACGACAGCGCCGAGCTCGTGGTGTCGCGGCCGGCGACGAGGAGGTTCATCGCCATGTCCCTGATGTACACGTCGGCGTCGGCGCTGCCGGCGATCTCGTCGTCGCAGAGGAAGGAGGAAAGCAAGTCGGCGACCGATTGCTTGTCGCCGCCTCCGCCGCCGCCTTGTCTGGACTTGCTCTCGTCATCGGCTCTGTGTTTCGCGATGGCCGACGCGACGAAGCTCTCGACCGTCCGCCTCGCCGCGGCGTTCCTCTTCTCGTGCCCAATCCCTAGCCATCTCATCGTCTTCCAGAACGACACTGGCATGGTGTGGCGGAGGAAGATCGTCCGCAGCACGTCGTCCATCGCCCGTGCGAAGGGGACCTCCGGCAGGCCGATGTCCAGGCAGCCGGGGTCGACGCCGAACACCAGGTGGCACGTCGCGTCTAGCGACCACCGCGTGAACACGTCCTGCAGGTCGCACGTCTTCCGGGCGTCGGCGACGTGCGCGAGGAAAGGCAGGAGGCCCTTCTCCACCTTGTCGAGGCTGGAGCGCGCCACGAAGGCGCGGAACCGCGGCGTGGTCATGAGCATCTGGGCCTTGTTCCGCTGCCGCCGCCACCGCTCGCCGTCGGTGTTGAAGATGCCGCCGCCGAGGACGTCGAACATGTCGGCGAACACGTCGCCCTTGGGGTAGTTGTCGAAGTTGGACGTGAAGATGTGGCGCACGTTGTCCGGGTCGCAGGTGACGAAGAACCGGAAGCCGGCGAGCCAGAAGCGGCACTGGAAGTTGAGCTGCGACGTGGCCAGCAGGAAGGTCACGCCGTCGAGGAGGCGGTGCATGTTGGCGACGATGGCCGGGAGCACGCCGACGATCGGCCACTGGACAACCCCTAGGCTACATTTTTTCATGGATTTAAGCCGCTGATATCGGTAGCAGATGACGAGCACGCATACTCCTGACAGGAGAAGCTGCAAGACGAAGAACAAGTCGAACAAATTCATGTTACCAATTGCTGCCATGCATGCACACGCGCGCGAATGCAGCACGTAGCTATCTATAGCGCAGTGGAGTGCAACAGTTTTGTGTGTGGAGCTATCTCATGGGGATGCGGCGGTGCTTATATACGCGCGGCCAAGGTCGATCGATGGCACAATCAATCAATGCTAGCTATCGCTGCCAACAGTTAACAGAACGGTTTGATTGATTGGTTGTGTCCATGATGATCCGAAGATGCTCATTTGCATGTATCTCTATTATCTCTCTATAGTGATATCCTGGATGG]
[-] EMBL OSS1347A [AACGTCACCATGCCCGCCGTTGCCGGGGAAGAGCCGCCCCTGCTGCAGCTGCGGCTTGCGGGAAGCGATGGGCGCCAGCTCCTGCAGGAGCTTCTGCTCGACGCGCGGGTTCGTGGAGAGGAGGTAGAAGAACCACGACAGCGCCGAGCTCGTGGTGTCGCGGCCGGCGACGAGGAGGTTCATCGCCATGTCCCTGATGTACACGTCGGCGTCGGCGCTGCCGGCGATCTCGTCGTCGCAGAGGAAGGAGGAAAGCAAGTCGGCGACCGATTGCTTGTCGCCGCCTCCGCCGCCGCCTTGTCTGGACTTGCTCTCGTCATCGGCTC ]
[+] EMBL AK107532 [ CTGCTGCAGCTGCGGCTTGCGGGAAGCGATGGGCGCCAGCTCCTGCAGGAGCTTCTGCTCGACGCGCGGGTTCGTGGAGAGGAGGTAGAAGAACCACGACAGCGCCGAGCTCGTGGTGTCGCGGCCGGCGACGAGGAGGTTCATCGCCATGTCCCTGATGTACACGTCGGCGTCGGCGCTGCCGGCGATCTCGTCGTCGCAGAGGAAGGAGGAAAGCAAGTCGGCGACCGATTGCTTGTCGCCGCCTCCGCCGCCGCCTTGTCTGGACTTGCTCTCGTCATCGGCTCTGTGTTTCGCGATGGCCGACGCGACGAAGCTCTCGACCGTCCGCCTCGCCGCGGCGTTCCTCTTCTCGTGCCCAATCCCTAGCCATCTCATCGTCTTCCAGAACGACACTGGCATGGTGTGGCGGAGGAAGATCGTCCGCAGCACGTCGTCCATCGCCCGTGCGAAGGGGACCTCCGGCAGGCCGATGTCCAGGCAGCCGGGGTCGACGCCGAACACCAGGTGGCACGTCGCGTCTAGCGACCACCGCGTGAACACGTCCTGCAGGTCGCACGTCTTCCGGGCGTCGGCGACGTGCGCGAGGAAAGGCAGGAGGCCCTTCTCCACCTTGTCGAGGCTGGAGCGCGCCACGAAGGCGCGGAACCGCGGCGTGGTCATGAGCATCTGGGCCTTGTTCCGCTGCCGCCGCCACCGCTCGCCGTCGGTGTTGAAGATGCCGCCGCCGAGGACGTCGAACATGTCGGCGAACACGTCGCCCTTGGGGTAGTTGTCGAAGTTGGACGTGAAGATGTGGCGCACGTTGTCCGGGTCGCAGGTGACGAAGAACCGGAAGCCGGCGAGCCAGAAGCGGCACTGGAAGTTGAGCTGCGACGTGGCCAGCAGGAAGGTCACGCCGTCGAGGAGGCGGTGCATGTTGGCGACGATGGCCGGGAGCACGCCGACGATCGGCCACTGGACAACCCCTAGGCTACATTTTTTCATGGATTTAAGCCGCTGATATCGGTAGCAGATGACGAGCACGCATACTCCTGACAGGAGAAGCTGCAAGACGAAGAACAAGTCGAACAAATTCATGTTACCAATTGCTGCCATGCATGCACACGCGCGCGAATGCAGCACGTAGCTATCTATAGCGCAGTGGAGTGCAACAGTTTTGTGTGTGGAGCTATCTCATGGGGATGCGGCGGTGCTTATATACGCGCGGCCAAGGTCGATCGATGGCACAATCAATCAATGCTAGCTATCGCTGCCAACAGTTAACAGAACGGTTTGATTGATTGGTTGTGTCCATGATGATCCGAAGATGCTCATTTGCATGTATCTCTATTATCTCTCTATAGTGATATCCTGGATGG]
[-] EMBL OSS4531A [ TGTCCGGGTCGCAGGTNACGAAGAACCGGAAGCCGGCGAGCCAGAAGCGGCACTGGAAGTTGAGCTGCGACGTGGCCAGCAGGAAGGTCACGCCGTCGAGGAGGCGGTGCATGTTGGCGACGATGGCCGGGAGCACGCCGACGATCGGCCACTGGACAACCCCTAGGCTACATTTTTTCATGGATTTAAGCCGCTGATATCGGTAGCAGATGACGAGCACGCATACTCCTGACAGGAGAAGCTGCAAGACGAAGAACAAGTCGAACAAATTCATGTTACCAATTGCTGCCATGCATGCACACGCGCGCGAATGCAGCACGTAGCTATCTATAGCGCAGTGGAGTG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||