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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4241#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2392 fasta sequence
[TTTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGATCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAAGTGACTTGGTGGGTCTAAACTATGTGTTCCTGAAGTTTACGGATGGCATATCTGATAAAAAGTCAGCACCAGTTTCGTATCTTGCATGTAAGGCGGGAGGACATATGTGACAAAATGGCCTTCAGGACAAGCATTGTGAGTATTGTATTGCCTTCCCTTTGTATCTTGTCTATGGTGGTAATTTGACCTTCAGCAGCCAAAATACTTAACGGTTGTTTGGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGTCATGGATTGTGAGTTTGAGATGAGGATTGAGCTTCTTAGGAACTGAAAAGGACATGATGATTGTCTGTACTATTATTGTTAATCAGCATAGTTTCCATTGGATGTAAGTTAGCATCAATCTTATTGTTCAGACAGCTCTTCTCTGAGCCTATTGTCGAACAATGCAAGATCTCAGTTTTGATAACTGTACGCTACACTATGAGCTATTGCTCACTCATCTGCAACATCTGATTGATTTGGGATTTTATGGGTTTTCTGTTGTCATATTGCAACTAAAGTTTCTTTTCAAGGTGATTTTACCTGTTCACATTTTTGTGCATCTTCTGTAATGTGATTATGTGAACCAAATATTCTAGTTCGCCCTACCATGTAAATGAAGTAATGCCATGCATTTCAAGTCTCCAAGTCCTGCCCATGATCTTCAATATTGTGAGGGTAAGACTTCTTCACATTTCACAACTACAAATTCATGGTCATGTGTAAGTTACTTTCAAACATGAATATTTCCATACCGATTGTGAATCAAATCACAAACATACTGTACGTATTGCTGCATTTACTATATCTGACTTTGAAAATGTTCAAGTGGCATTTGGTTCTGTGATCAATGTACTTTGTCCTCAATGAATTTTCCTTTGTCATGAGCACCTGACTTGTCTTTCTGTTGAATACCGGCACAGCGCGTATTGACAATTCACCGATTCAGGCTGTGTTATGAAGACGGAGCACCGGATTATACAAGTAGTCAGGCACTGTTATTCTGTGAAGCTGACTTTCACTGATCCATCCACCGACGCATCATCAGAATTGATAAGGAGGAGCATCTGTTCTGTTCTGTAGTTTAACAGGCCCACCCAGATCTGATTCATTTGATTACCTTTCGTTTTCAGATGAAACCATCTGGCACCTGCGATCCAAAGAGGCCTTGAAAGCTGGTCCATGTTTATCTTCAGAAACCAGAATAACAAGTCCATGGCTTA]
[+] EMBL AK106455 [TTTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGATCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAAGTGACTTGGTGGGTCTAAACTATGTGTTCCTGAAGTTTACGGATGGCATATCTGATAAAAAGTCAGCACCAGTTTCGTATCTTGCATGTAAGGCGGGAGGACATATGTGACAAAATGGCCTTCAGGACAAGCATTGTGAGTATTGTATTGCCTTCCCTTTGTATCTTGTCTATGGTGGTAATTTGACCTTCAGCAGCCAAAATACTTAACGGTTGTTTGGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGTCATGGATTGTGAGTTTGAGATGAGGATTGAGCTTCTTAGGAACTGAAAAGGACATGATGATTGTCTGTACTATTATTGTTAATCAGCATAGTTTCCATTGGATGTAAGTTAGCATCAATCTTATTGTTCAGACAGCTCTTCTCTGAGCCTATTGTCGAACAATGCAAGATCTCAGTTTTGATAACTGTACGCTACACTATGAGCTATTGCTCACTCATCTGCAACATCTGATTGATTTGGGATTTTATGGGTTTTCTGTTGTCATATTGCAACTAAAGTTTCTTTTCAAGGTGATTTTACCTGTTCACATTTTTGTGCATCTTCTGTAATGTGATTATGTGAACCAAATATTCTAGTTCGCCCTACCATGTAAATGAAGTAATGCCATGCATTTCAAGTCTCCAAGTCCTGCCCATGATCTTCAATATTGTGAGGGTAAGACTTCTTCACATTTCACAACTACAAATTCATGGTCATGTGTAAGTTACTTTCAAACATGAATATTTCCATACCGATTGTGAATCAAATCACAAACATACTGTACGTATTGCTGCATTTACTATATCTGACTTTGAAAATGTTCAAGTGGCATTTGGTTCTGTGATCAATGTACTTTGTCCTCAATGAATTTTCCTTTGTCATGAGCACCTGACTTGTCTTTCTGTTGAATACCGGCACAGCGCGTATTGACAATTCACCGATTCAGGCTGTGTTATGAAGACGGAGCACCGGATTATACAAGTAGTCAGGCACTGTTATTCTGTGAAGCTGACTTTCACTGATCCATCCACCGACGCATCATCAGAATTGATAAGGAGGAGCATCTGTTCTGTTCTGTAGTTTAACAGGCCCACCCAGATCTGATTCATTTGATTACCTTTCGTTTTCAGATGAAACCATCTGGCACCTGCGATCCAAAGAGGCCTTGAAAGCTGGTCCATGTTTATCTTCAGAAACCAGAATAACAAGTCCATGGCTTA]
consensusID : consensus_4241#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1555 fasta sequence
[TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATGGCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCGTCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTACCGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGTGTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTGCAAAGAAATGTGTAGTTATGTGTCTTACTATGAAACAAGATTTGTCCTTCTGTATCGTGGATCGATGCCATCTCTATTCTCTTAGCACTTTGTAACATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC]
[+] EMBL AK061097 [TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATGGCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCGTCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTACCGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGTGTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTGCAAAGAAATGTGTAGTTATGTGTCTTACTATGAAACAAGATTTGTCCTTCTGTATCGTGGATCGATGCCATCTCTATTCTCTTAGCACTTTGTAACATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC]
[+] EMBL AK073547 [TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATGGCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCGTCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTACCGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGTGTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4241#0 ------------------------------------------------------------
consensus_4241#1 TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATG 60
consensus_4241#0 ----------------------------TTTCCTCCCCCTTCCAC----CCGCGCTCCC- 27
consensus_4241#1 GCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCG 120
** * * * * ****** **
consensus_4241#0 CCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGG 87
consensus_4241#1 TCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGG 180
* ***** * *****************************************
consensus_4241#0 CAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTC 147
consensus_4241#1 CAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTC 240
************************************************************
consensus_4241#0 ATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCAC 207
consensus_4241#1 ATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCAC 300
************************************************************
consensus_4241#0 TCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCC 267
consensus_4241#1 TCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCC 360
************************************************************
consensus_4241#0 TCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCC 327
consensus_4241#1 TCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCC 420
************************************************************
consensus_4241#0 CAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACC 387
consensus_4241#1 CAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACC 480
************************************************************
consensus_4241#0 GGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAG 447
consensus_4241#1 GGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAG 540
************************************************************
consensus_4241#0 GCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTC 507
consensus_4241#1 GCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTC 600
************************************************************
consensus_4241#0 CACCCGCGCTCCCCCTACG----------------------------------------- 526
consensus_4241#1 CACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTAC 660
*******************
consensus_4241#0 -------------GCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGC 573
consensus_4241#1 CGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGC 720
***********************************************
consensus_4241#0 CGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGATCGGG 633
consensus_4241#1 CGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGG 780
****************************************************** *****
consensus_4241#0 CTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGG 693
consensus_4241#1 CTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGG 840
************************************************************
consensus_4241#0 GACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTC 753
consensus_4241#1 GACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTC 900
************************************************************
consensus_4241#0 GCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGG 813
consensus_4241#1 GCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGG 960
************************************************************
consensus_4241#0 CTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGAC 873
consensus_4241#1 CTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGAC 1020
************************************************************
consensus_4241#0 AGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGG 933
consensus_4241#1 AGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGG 1080
************************************************************
consensus_4241#0 TTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAG 993
consensus_4241#1 TTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAG 1140
************************************************************
consensus_4241#0 GTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATAT 1053
consensus_4241#1 GTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATAT 1200
************************************************************
consensus_4241#0 GGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTG 1113
consensus_4241#1 GGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTG 1260
************************************************************
consensus_4241#0 TCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAAGTGACTTGGTG 1173
consensus_4241#1 TCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGG-AATAAGGAG 1319
************************************************ * * ** *
consensus_4241#0 GGTCTAAACTATGTGTTCCTGAAGTTTACGGATGGCATATCTGATAAAAAGTCAGCACCA 1233
consensus_4241#1 TGTT---GCTGTTTGATC---GATCCTA----TAGTGCTTTTCATTACGTTTTA----CT 1365
** ** * ** ** * ** * * * * ** * * * *
consensus_4241#0 GTTTCGTATCTTGCATGTAAGGCGGGAGGACATATGTGACAAAATGGCCTTCAGGACAAG 1293
consensus_4241#1 ATGTCATAT-TGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTG 1424
* ** *** * *** ** * * * *** * * * *
consensus_4241#0 CATTGTGAGTATTGTATTGCCTTCCCTTTGTATCTTGTCTATGGTGGTA-ATTTGACCTT 1352
consensus_4241#1 CA----AAGAAATGTGTAGT------TATGTGTCTTA-CTATGAAACAAGATTTGTCCTT 1473
** ** * *** * * * *** **** ***** * ***** ****
consensus_4241#0 CAGCAGCCAAAATACTTAACGGTTGTTTGGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGT 1412
consensus_4241#1 CTGTATC--------------GTGGATCGATGCCATCTCTATTCTCTTAGCACTTTGTAA 1519
* * * * ** * * * * * * ** **** * * *
consensus_4241#0 CATGGATTGTGAGTTTGAGATGAGGATTGAGCTTCTTAGGAACTGAAAAGGACATGATGA 1472
consensus_4241#1 CATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC------------------------ 1555
**** * * * * ** * *** *
consensus_4241#0 TTGTCTGTACTATTATTGTTAATCAGCATAGTTTCCATTGGATGTAAGTTAGCATCAATC 1532
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 TTATTGTTCAGACAGCTCTTCTCTGAGCCTATTGTCGAACAATGCAAGATCTCAGTTTTG 1592
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 ATAACTGTACGCTACACTATGAGCTATTGCTCACTCATCTGCAACATCTGATTGATTTGG 1652
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 GATTTTATGGGTTTTCTGTTGTCATATTGCAACTAAAGTTTCTTTTCAAGGTGATTTTAC 1712
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 CTGTTCACATTTTTGTGCATCTTCTGTAATGTGATTATGTGAACCAAATATTCTAGTTCG 1772
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 CCCTACCATGTAAATGAAGTAATGCCATGCATTTCAAGTCTCCAAGTCCTGCCCATGATC 1832
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 TTCAATATTGTGAGGGTAAGACTTCTTCACATTTCACAACTACAAATTCATGGTCATGTG 1892
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 TAAGTTACTTTCAAACATGAATATTTCCATACCGATTGTGAATCAAATCACAAACATACT 1952
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 GTACGTATTGCTGCATTTACTATATCTGACTTTGAAAATGTTCAAGTGGCATTTGGTTCT 2012
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 GTGATCAATGTACTTTGTCCTCAATGAATTTTCCTTTGTCATGAGCACCTGACTTGTCTT 2072
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 TCTGTTGAATACCGGCACAGCGCGTATTGACAATTCACCGATTCAGGCTGTGTTATGAAG 2132
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 ACGGAGCACCGGATTATACAAGTAGTCAGGCACTGTTATTCTGTGAAGCTGACTTTCACT 2192
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 GATCCATCCACCGACGCATCATCAGAATTGATAAGGAGGAGCATCTGTTCTGTTCTGTAG 2252
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 TTTAACAGGCCCACCCAGATCTGATTCATTTGATTACCTTTCGTTTTCAGATGAAACCAT 2312
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 CTGGCACCTGCGATCCAAAGAGGCCTTGAAAGCTGGTCCATGTTTATCTTCAGAAACCAG 2372
consensus_4241#1 ------------------------------------------------------------
consensus_4241#0 AATAACAAGTCCATGGCTTA 2392
consensus_4241#1 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||