cluster # 4253

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Oryza sativa
cluster # 4253 cluster # 4253 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4253#0 length = 722 sequences # 3

consensusID : consensus_4253#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 722
fasta sequence

                              [CTCTCCTCCTCGTGGCCATGACCATGGAAGCCTCCATGTCCAGGACAGTGTCCATGCTCTTCTCCGCCAGGAGGTGCATCGTCGCCAGCGCCGCCAAGGACATCGAGATAGCACAAGGAGGAAGAAGGAGAAGAAGCAACGATGTGAAGCAGCAGCGAGGGTCACACGGCCAGCTCGCCGTGGCCGCGGCGACGACGGCGGCGGCCATGACCGGCCAATGCCAC-GCTGCTGCTGCTGCTGCTGCACCGGAGCGTCAGTGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGGTGGCGGTGGTAGGGGAGCTGGACCCAGCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGCCGGCGCTGTCGGCGTTCGGGTTCCTGTTCATCGCCCGGATCGTGATGTCGTGGTACCCGAGGCTCCCCGTGAGGGAGTTCCCCTACGTGGTGGCGTACGCGCCGACGGAGCCGCTCCTCGCCGTGACGAGGAAGGTGATCCCGCCGCTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGTTCGGCCTCGTCAGCTTCGCCAGCGAGATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCCTCTCTCAGCAAAAGCCTTAGCAAACTCTGTTTCGTTCGTTCGTTTCCATGTGAAAAGTGAAGCAAATTAATACGCTGTGATTCGGACTTTACACGATCTCCTGTAGTATTAATCGTCGGCTACAAAAACCA]

[+] EMBL AK058564             [CTCTCCTCCTCGTGGCCATGACCATGGAAGCCTCCATGTCCAGGACAGTGTCCATGCTCTTCTCCGCCAGGAGGTGCATCGTCGCCAGCGCCGCCAAGGACATCGAGATAGCACAAGGAGGAAGAAGGAGAAGAAGCAACGATGTGAAGCAGCAGCGAGGGTCACACGGCCAGCTCGCCGTGGCCGCGGCGACGACGGCGGCGGCCATGACCGGCCAATGCCAC GCTGCTGCTGCTGCTGCTGCACCGGAGCGTCAGTGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGGTGGCGGTGGTAGGGGAGCTGGACCCAGCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGCCGGCGCTGTCGGCGTTCGGGTTCCTGTTCATCGCCCGGATCGTGATGTCGTGGTACCCGAGGCTCCCCGTGAGGGAGTTCCCCTACGTGGTGGCGTACGCGCCGACGGAGCCGCTCCTCGCCGTGACGAGGAAGGTGATCCCGCCGCTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGTTCGGCCTCGTCAGCTTCGCCAGCGAGATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCCTCTCTCAGCAAAAGCCTTAGCAAACTCTGTTTCGTTCGTTCGTTTCCATGTGAAAAGTGAAGCAAATTAATACGCTGTGATTCGGACTTTACACGATCTCCTGTAGTATTAATCGTCGGCTACAAAAACCA]
[+] EMBL AK098935             [        CTCGTGGCCATGACCATGGAAGCCTCCATGTCCAGGACAGTGTCCATGCTCTTCTCCGCCAGGAGGTGCATCGTCGCCAGCGCCGCCAAGGACATCGAGATAGCACAAGGAGGAAGAAGGAGAAGAAGCAACGATGTGAAGCAGCAGCGAGGGTCACACGGCCAGCTCGCCGTGGCCGCGGCGACGACGGCGGCGGCCATGACCGGCCAATGCCACTGCTGCTGCTGCTGCTGCTGCACCGGAGCGTCAGTGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGGTGGCGGTGGTAGGGGAGCTGGACCCAGCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGCCGGCGCTGTCGGCGTTCGGGTTCCTGTTCATCGCCCGGATCGTGATGTCGTGGTACCCGAGGCTCCCCGTGAGGGAGTTCCCCTACGTGGTGGCGTACGCGCCGACGGAGCCGCTCCTCGCCGTGACGAGGAAGGTGATCCCGCCGCTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGTTCGGCCTCGTCAGCTTCGCCAGCGAGATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCCTCTCTCAGCAAAAGCCTTAGCAAACTCTGTTTCGTTCGTTCGTTTCCATGTGAAAAGTGAAGCAAATTAATACGCTGTGA                                                   ]
[+] EMBL CB682432             [                                                                                                              GCACCCTGAGGAAGAAGGAGAAGAAGCAACGATGTGAAGCAGCAGCGAGGGTCACACGGCCAGCTCGCCGTGGCCGCGGCGACGACGGCGGCGGCCATGACCGGCCAATGCCAC GCTGCTGCTGCTGCTGCTGCACCGGAGCGTCAGTGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGGTGGCGGTGGTAGGGGAGCTGGACCCAGCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGCCGGCGCTGTCGGCGTTCGGGTTCCTGTTCATCGCCCGGATCGTGATGTCGTGGTACCCGAGGCTCCCCGTGAGGGAGTTCCCCTACGTGGTGGCGTACGCGCCGACAGAGCCGCTCCTCGCCGTGACGAGGAAGGTGATCCCGCCGCTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGTTCGGCCTCGTCAGCTTCGCCAGCGAGATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCCTCTCTCAGCAAAAGCCTTAGCAAACTCTGTTTCGTTCGTTCGTTTCCATGTGAAAAGTGAAGCAAATTAATACGCTGTGATTCGGACTTTACACGATCTCTTGTAGTATTAATCGTCGGCTACAAAAACCA]




>consensus_4253#0
CTCTCCTCCTCGTGGCCATGACCATGGAAGCCTCCATGTCCAGGACAGTGTCCATGCTCT
TCTCCGCCAGGAGGTGCATCGTCGCCAGCGCCGCCAAGGACATCGAGATAGCACAAGGAG
GAAGAAGGAGAAGAAGCAACGATGTGAAGCAGCAGCGAGGGTCACACGGCCAGCTCGCCG
TGGCCGCGGCGACGACGGCGGCGGCCATGACCGGCCAATGCCACGCTGCTGCTGCTGCTG
CTGCACCGGAGCGTCAGTGGCAGGAGGTGGCGGAGTGGGTGTGCAGGGCGGTGGCGGTGG
TAGGGGAGCTGGACCCAGCGACGGCGAAGGCGGCGATCGGGGTGGCCGGGCCGGCGCTGT
CGGCGTTCGGGTTCCTGTTCATCGCCCGGATCGTGATGTCGTGGTACCCGAGGCTCCCCG
TGAGGGAGTTCCCCTACGTGGTGGCGTACGCGCCGACGGAGCCGCTCCTCGCCGTGACGA
GGAAGGTGATCCCGCCGCTCGGCGGCGTCGACGTCACGCCGGTGGTGTGGTTCGGCCTCG
TCAGCTTCGCCAGCGAGATCCTCGTCGGCCCACAGGGATTGCTCGTGCTCCTCTCTCAGC
AAAAGCCTTAGCAAACTCTGTTTCGTTCGTTCGTTTCCATGTGAAAAGTGAAGCAAATTA
ATACGCTGTGATTCGGACTTTACACGATCTCCTGTAGTATTAATCGTCGGCTACAAAAAC
CA

clustalw multiple alignements is not computed in this case