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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4254#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3110 fasta sequence
[CTCCTCGACCCGCCAAACAGCAGCCCGCTCTTTTGATCTTTTCCTCCCTCTCTTCTTCTCCCTACGAACCACGAGTCGCCGCCAATGGCCTCCTGACAAGGCCTCGTCTCGGTTCTCTGCTCGTGGTTGGGGGCTTCTTGGCGTTCTTGATTTTTTGGTTTGGGTGCCTTGGTGCTCGTTCTTGAGGCGTTCGTTTTCCCTTGGTTTGATGCGGCGGCGGTGGTGAGGGTGGGAGCAGCCGCAGGTCGGGAATGGAAGGGGACGAGGGCGCGGCGGCGGCGGCGAGGATAAGGCTAGTGCGGTGCCCCAAGTGCGACAAGTTCTTGCCGGAGCTCCCCGCCTACTCCGTCTACGTCTGCGGCGGCTGCGGCGCCGCTCTCCAAGCAAAGAAGAAGTACTCAGCCCAAGGTTCTGATAACTCTGATAATGGACATGTGAAGTACCTTGAGGTACTAGAGAGTGTTGCGGAGGCGCCTGAAGCAATGGATGGTGCTACCGCTGATGGTAGATCTATACCCAATAGAATTTCAGCTTTGCACAGTAGATCAGTTTACAACCATGAAGACAATCGAATGGCAAGAGGTCCAAGTACTTCAACAGGTGAAGCTACTATTAGAAACGATGGTAGGGAGGCAAAGTACATGCGCATCCGTAATGTGGAAAATGCTGACATGATGAAATCAGTAAGAGGAAGAGGTATATCTGACATATCTCCGAGGTCTCCAATCGATGGAATTCCACCCACCTCTTACCAAGCGGAAAGCCTTGTCAACTACCAATTACAGTCAAAATACAGATTCTCCAACAGGGAGCATGCCAATGATAGGGACTTGGATGGTCCAAGCAGAGTTAGGGGCCTTGAGAAAGATCGTGCTGAGCTCTTGAAGATGCTTGATGAGTTGAGAGACCAGGTGCAGCAATCATGTGAGGTTACTGATGCACCAAGTAGAAGTGCTACAACTAATAGACCTGCAGATGCCTCAAGTTCACATGGTGCGCATGATCAGCCAAATCAGCTGAGGCATGATCCATCTGTATTGCATTGGAATGGTTCTCATCACTCGCCATCCTTGAATGTGCAAAGTCCTAATATCCCACAAGTCCATGCTCCATTGCCTACTCGACAGAATCTTCATGGATATGCAGAGCCCATCCCGCATGCGAGAGCCTCTAGCTATCATGCTGGTGCTGGTTACCCCTGCAGAAATGTTGATAATTTCTTCTTTGGACATCATGATCCTGACCCTTTGCTCTCATGTCACCATGAAGGCTTGTACCATCAGCCCGTCTGTTCTTGCTTCAATTGTTACCACCGAGAGTTTTTGCCTGTACAGGGAACTCCCCTTGGTTTTACTGATCAAAGGGCACCATACCTTATGAACAGTTATGGAGCATATCCTGTAGAGGGTCCCCTATATGGTCAGCAGAGATACACTTCAAGAGGTACTAATACTTCTTTACAGAGGAATCACCTGAGGACCAATGTAAGGAAGAAACCGGCACAAACTTGTGAGCCGATTGCAGGTGGTGCCCCTTTCACCATATGCTACAATTGCTATGAAGTGCTGCGAATACCAATGAAACATTCTTTGTTGGGAAAGGAGTATAAGCTGATGTGTGGATCATGCTCACATGCAATTCTAGTCAACCTTGATGGAAGCAGGCTCAATGTTTCAGAACCTGCGCCCGGTATAAATTTATCTGCTGCACTGCAAAATGGTATTGGTGATAGCATGAGAAACAATGGGCATGCTAATGCTGATGAGAGGTTGCTTCCACAATATTGTTTTTCTAATGGAAGTCATGAATCTCAAGAAAAAGATCTAGAATCAAATTCAAGTGAATCAGATAGCAAACACACTCCTCTAGGGACTGATTCTGAAAATACTCCCCAGTCCAGGGATCTTCCTTCTGAAGCCAATGTAATTTCCCATGTACCAAGTTTACCGCATCATGATCGTTGTGGATTCTCACCATCGGAAGATTCTGGAAAGGGAAGTAGAAGTACCCATTCTGAACATGAAAAGGCTACCCTATTTACTGAAAGTTGCAAACGGAACTCAATTAAAGATGTATGTGTAGCCAATGAGACACAGTCTCCAGTCGATGAGTTTGATGATACTTTATATGCACAAGATATGCTAAATTTGCCACAAAATGTTGGCCATACTAGGTCTACAAAGGCAGGCGATTCATTTCTAACCAATCTCATTAAAAGGAGCTTCAAAATGAACAATGGAACACGCAATGGAAGAGCAAGGATTTTTGTTAATGGCTTTCCTATCTCTGACCGTGCAGTCAGGAAGGCTGAGAAGCTAGCTGGAGAAATCTGTCCTGGTGATTACTGGTATGATTATCGTGCTGGGTTCTGGGGTGTTATGGGGCGACCCTGCCTTGGCATGATACCTCCTTATATTCCAGAGTTCAATTATCCTATGCCCAAGAACTGTGGTGGTGGAAACACCGGCATATTTATTAATGGGAGAGAACTTCATCAGAAGGATTTGGATCTACTTGTGTCTCGAGGACTGTCTGATTCCCCTGGCAGATCTTATATAGTTGAAAATTCTGGGAAAGTTTCAGATGAAGTTTCTGGTGAAGAGCTTTATGGCCTTGGCAAGCTTGCACCGACTGTGGAGAAAATGAGGCGCGGATTTGGCATGCGAGTCCCAAGAATCATCCAGTGACAAACTGACGGGTCAATACAATACATTCACAAGCTCTGGAGATGCTAAGGGACAAGCCAATGCCATAGCTCATAGCTGCAGCTCACACAAGTCACAACAGGGTGACTTGAGTTTTCCAAGAATACTGTTTCTAGTTTAGCTCGTGAATCTAGTTATCGTCCTCCTTTCTTGTTGCCTGATTGTGCTGCCCCTTCAGATGTCATATGGAGGCATTCTTGTAGTTTTCTAGTGTATTTGTGATTTCTTTTCGACCTGGTACAATGATTTTAGGGGGGGGGGGGGGAGGAGGGAGGTAGTCAATTGAATTTGTTTGGTTTGCATTCTAACATGTATTATGCACCTTCGAAGAATGATGTTGAAATGCATGACAAAACGCATCAAAATGAGCTCAATTAGAAGGTACAGGAAGGAGTTGCTGGGGAT]
[+] EMBL AK100666 [CTCCTCGACCCGCCAAACAGCAGCCCGCTCTTTTGATCTTTTCCTCCCTCTCTTCTTCTCCCTACGAACCACGAGTCGCCGCCAATGGCCTCCTGACAAGGCCTCGTCTCGGTTCTCTGCTCGTGGTTGGGGGCTTCTTGGCGTTCTTGATTTTTTGGTTTGGGTGCCTTGGTGCTCGTTCTTGAGGCGTTCGTTTTCCCTTGGTTTGATGCGGCGGCGGTGGTGAGGGTGGGAGCAGCCGCAGGTCGGGAATGGAAGGGGACGAGGGCGCGGCGGCGGCGGCGAGGATAAGGCTAGTGCGGTGCCCCAAGTGCGACAAGTTCTTGCCGGAGCTCCCCGCCTACTCCGTCTACGTCTGCGGCGGCTGCGGCGCCGCTCTCCAAGCAAAGAAGAAGTACTCAGCCCAAGGTTCTGATAACTCTGATAATGGACATGTGAAGTACCTTGAGGTACTAGAGAGTGTTGCGGAGGCGCCTGAAGCAATGGATGGTGCTACCGCTGATGGTAGATCTATACCCAATAGAATTTCAGCTTTGCACAGTAGATCAGTTTACAACCATGAAGACAATCGAATGGCAAGAGGTCCAAGTACTTCAACAGGTGAAGCTACTATTAGAAACGATGGTAGGGAGGCAAAGTACATGCGCATCCGTAATGTGGAAAATGCTGACATGATGAAATCAGTAAGAGGAAGAGGTATATCTGACATATCTCCGAGGTCTCCAATCGATGGAATTCCACCCACCTCTTACCAAGCGGAAAGCCTTGTCAACTACCAATTACAGTCAAAATACAGATTCTCCAACAGGGAGCATGCCAATGATAGGGACTTGGATGGTCCAAGCAGAGTTAGGGGCCTTGAGAAAGATCGTGCTGAGCTCTTGAAGATGCTTGATGAGTTGAGAGACCAGGTGCAGCAATCATGTGAGGTTACTGATGCACCAAGTAGAAGTGCTACAACTAATAGACCTGCAGATGCCTCAAGTTCACATGGTGCGCATGATCAGCCAAATCAGCTGAGGCATGATCCATCTGTATTGCATTGGAATGGTTCTCATCACTCGCCATCCTTGAATGTGCAAAGTCCTAATATCCCACAAGTCCATGCTCCATTGCCTACTCGACAGAATCTTCATGGATATGCAGAGCCCATCCCGCATGCGAGAGCCTCTAGCTATCATGCTGGTGCTGGTTACCCCTGCAGAAATGTTGATAATTTCTTCTTTGGACATCATGATCCTGACCCTTTGCTCTCATGTCACCATGAAGGCTTGTACCATCAGCCCGTCTGTTCTTGCTTCAATTGTTACCACCGAGAGTTTTTGCCTGTACAGGGAACTCCCCTTGGTTTTACTGATCAAAGGGCACCATACCTTATGAACAGTTATGGAGCATATCCTGTAGAGGGTCCCCTATATGGTCAGCAGAGATACACTTCAAGAGGTACTAATACTTCTTTACAGAGGAATCACCTGAGGACCAATGTAAGGAAGAAACCGGCACAAACTTGTGAGCCGATTGCAGGTGGTGCCCCTTTCACCATATGCTACAATTGCTATGAAGTGCTGCGAATACCAATGAAACATTCTTTGTTGGGAAAGGAGTATAAGCTGATGTGTGGATCATGCTCACATGCAATTCTAGTCAACCTTGATGGAAGCAGGCTCAATGTTTCAGAACCTGCGCCCGGTATAAATTTATCTGCTGCACTGCAAAATGGTATTGGTGATAGCATGAGAAACAATGGGCATGCTAATGCTGATGAGAGGTTGCTTCCACAATATTGTTTTTCTAATGGAAGTCATGAATCTCAAGAAAAAGATCTAGAATCAAATTCAAGTGAATCAGATAGCAAACACACTCCTCTAGGGACTGATTCTGAAAATACTCCCCAGTCCAGGGATCTTCCTTCTGAAGCCAATGTAATTTCCCATGTACCAAGTTTACCGCATCATGATCGTTGTGGATTCTCACCATCGGAAGATTCTGGAAAGGGAAGTAGAAGTACCCATTCTGAACATGAAAAGGCTACCCTATTTACTGAAAGTTGCAAACGGAACTCAATTAAAGATGTATGTGTAGCCAATGAGACACAGTCTCCAGTCGATGAGTTTGATGATACTTTATATGCACAAGATATGCTAAATTTGCCACAAAATGTTGGCCATACTAGGTCTACAAAGGCAGGCGATTCATTTCTAACCAATCTCATTAAAAGGAGCTTCAAAATGAACAATGGAACACGCAATGGAAGAGCAAGGATTTTTGTTAATGGCTTTCCTATCTCTGACCGTGCAGTCAGGAAGGCTGAGAAGCTAGCTGGAGAAATCTGTCCTGGTGATTACTGGTATGATTATCGTGCTGGGTTCTGGGGTGTTATGGGGCGACCCTGCCTTGGCATGATACCTCCTTATATTCCAGAGTTCAATTATCCTATGCCCAAGAACTGTGGTGGTGGAAACACCGGCATATTTATTAATGGGAGAGAACTTCATCAGAAGGATTTGGATCTACTTGTGTCTCGAGGACTGTCTGATTCCCCTGGCAGATCTTATATAGTTGAAAATTCTGGGAAAGTTTCAGATGAAGTTTCTGGTGAAGAGCTTTATGGCCTTGGCAAGCTTGCACCGACTGTGGAGAAAATGAGGCGCGGATTTGGCATGCGAGTCCCAAGAATCATCCAGTGACAAACTGACGGGTCAATACAATACATTCACAAGCTCTGGAGATGCTAAGGGACAAGCCAATGCCATAGCTCATAGCTGCAGCTCACACAAGTCACAACAGGGTGACTTGAGTTTTCCAAGAATACTGTTTCTAGTTTAGCTCGTGAATCTAGTTATCGTCCTCCTTTCTTGTTGCCTGATTGTGCTGCCCCTTCAGATGTCATATGGAGGCATTCTTGTAGTTTTCTAGTGTATTTGTGATTTCTTTTCGACCTGGTACAATGATTTTAGGGGGGGGGGGGGGAGGAGGGAGGTAGTCAATTGAATTTGTTTGGTTTGCATTCTAACATGTATTATGCACCTTCGAAGAATGATGTTGAAATGCATGACAAAACGCATCAAAATGAGCTCAATTAGAAGGTACAGGAAGGAGTTGCTGGGGAT]
consensusID : consensus_4254#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2946 fasta sequence
[GAGGGGAAGCTTTGCATTTGCCCGGCCGACTCTCTTCTTGGTTCTTGGTTGTGGCGTCGGCGTCTCCGTGTTGTTTGGGCTGGCCACCGTTGCTCGCCGTTCTTGGGGGCAGGCAAACGGCACCGGCGGTATGGAGGCATTGGGAGATATGGAGGGGGAGGAGGGGCAGCGGCGGCAGCAGCAGATACGGGTGGTGCGGTGCCCCAAGTGCGAGAAGTTCTTGCCGGAGCTCCCCAACTACTCCGTCTACGTCTGCGGCGGATGCGGCGCCACTCTCCAAGCAAAGAAGAACTCAGCATCTGAGAATTCCTCAGAGAAATCTGATGGTGGACATGTGAAGTACCTTGAAGTGCTGGAGAGTTCACCAGATAACAAAGGAGCTGCATCTAAAGACACTTGTGAGGCTGCCCAAGAAGGAGAAGCCAAAAATGGAGAAGCTAAAGCAGAAGAGAGACAGGTACTTCTTGACAGAATGGCAGCTTGTGATGATAGCCGAATTCCAAGAGAACCAAATGCCTTGAAGCTTGAGGCTTCACTTAGAGATGACAGCAGGGAAATTCGGGAGGCCAAGTACCGGCGCATCCGCAGTGAGGACAAAGGAGAAGCAAAACACACAGTGAGAGCCAGAGACAGATCGCCAAGATCAGTTGTTGATGCCATCCCTCCGAATGCATATCCTGCAGAAGGCCCGTCTGACTACCATATTAAGTCAAGATTCAGACATACCAATGGTGAGCAAGCTGATATGAGAAATTTGGAGGGCCTAAACAGAGTCAATGGTCTTGAAAAAGACCGTGCTGATCTGTTACGGATGCTTGATGAGCTGAGGGGTCAGGTGCAGAGATCCTGTGAGATCACCAACAAGCCAAGTGGAAGTACTTCTACAGATAAAGCGGTGGATGCCTCAGGGTTATATAATCCTCGTGAGCGGTTGAGTCGGTTACGACATGGTTCACCTCAGTTGCAGCGGAGTGGTTCTCAGCAGTCACCATCCTTGAATGGGCAAGCTCCTTGCATTCCGCAAGCTTATGCTCCAGGAACTGCTCAGCAAGATCTTCATGGATACGGGGAGCCAATGGCACACATGGGGGCTCCAAGCTATCCTGTTGGCACATATCCATGGAGAAATTTTGATAATTATTTTTATGGACAGTATGATCCTGACCCTCTGATCTCTTACCACCATGATGGCTTCTACCATCAGCCTGCCTGTTCTTGTCTACATTGCTACCACCGTGAGTTCTTACCTGTTCAGGGGCCTCCTCTGGGTTTCAACCATCGCAGGGTACCACCGTATGTTATGAATAATCCTAGAGTTTACCCGGTTGATGGTCCTGCAATGTTTGGCACACAGAATTACAATTCAAGAGTCAACGCTTCAATGCAGCGCAATCACATGAGGGCCGCTATGAGTAAAAAACCTGCACAGACTTGTGAACCGATTGCATGTGGTGCCCCATTCACTATATGCTACAACTGCTATGAAGTACTGCAACTTCCGAAGAAATCCCCCGTGCCAGGGAAGGATGAGTACAAATTACGTTGCGGGTCATGCTCACATGCGCTTGTGGTCAAGCTTGATGGAAGCAGGCTTGATGTTTCAGCACCTTCACCTATTTCACACATATCTGGCGGCAGCAAAATTAGTTCCAATGATGGCCAAGGAAGCAATGCGAATTCTGCTCCACATGAGAGGGTGCTTCCACTTTATAGTTTTTCTGCAGCAAGTCATGGTTCTCAAGACCTACCCTCGAACTCAAGTGAAGCTGAAAAAATGCAAGGGATATCGTCTTCTTGCAGCATTTCTGAAGATGAGAACAGCCCTGCGAGATCTAATTCCCAGAGGGACACCCCTGGGTCTAGGGATCTTCATCCTGAAGCTGAGGTGTCTACCCGTGTTCCAAGTTTACATCTTCGTGATCATTTTGGATACTCGCCATCTGAGAAGGTAGTTGATGGATCAGGGAAAGGAAGCAGAAGTACTCGATCTGAACATGAGAAGGCTGTGTTGACAGAAAGTTTCAAGCAGAACACTGTAAAAGATGTATCAGTAGTGAACATAATGGACTTGTCGGATGATGAGTATGATGATCCTGACTACATGCAAGATCGAGGTGATGTGGCACAACCTGTAGATCACCCTCGGGCCGTGAAAACGGGTGATTCATTTTTCACCAATCTCATAAAGAAGAGCTTCAAAATTAACAACGGAATGGGCAATGGCAGAGCAAAGGTTTTCATTAATGGCTATCCCATCTCTGATCGGGCGGTCAGGAAGGCTGAGAAGATAGCTGGACCAATCTATCCTGGTGAATACTGGTATGATTACCGTGCTGGTTTCTGGGGTGTAATGGGACAGTCTTGCCTCGGCATGATACCGCCATATATTCCAGAACTCAATTATCCTATGCCCAAGAAATGCGCTGCTGGAAATACAGGTGTATTTGTTAATGGGAGAGAACTTCACCAGAAGGATTTGGATTTACTTGTGGGTCGAGGACTCCCAGATTCTCCCGGTAGATCATACAGAGTTGAGATGTCCGGTAAAGTGTCGGATGAAGTCTCTGGTGAGGAGCTGTATTGTCTCGGCAAACTTGCACCAACCGTCGAGAAAATGAAGCGCGGATTTGGCATGAGAGTCCCCAGAATCATCCCTTGAGATCAGTGATTCTTCGGCACAACTGTAGAATTCAAGACCCCATTTTGGATGCTGTTTCGGTTCTTCTGCGAAATGCTTTGATGCTTGTTGGTTGTTGATTGTCCAGCCGTCTGTTTGCGTGGTCTCATGATCTGAGATGTATAATCTGTGGTTGCTTTGACTGGTGCTTGTCTGAAAAATTATCCAATGGAAATTTTGCAATGTGAAGTTTGTTTTGTGCTATGAAACCGGGCCATGCTGGAAGTATATATAAAAAATGTCAATTGGTTTTTGACCAGTTAAATTTG]
[+] EMBL AK073995 [GAGGGGAAGCTTTGCATTTGCCCGGCCGACTCTCTTCTTGGTTCTTGGTTGTGGCGTCGGCGTCTCCGTGTTGTTTGGGCTGGCCACCGTTGCTCGCCGTTCTTGGGGGCAGGCAAACGGCACCGGCGGTATGGAGGCATTGGGAGATATGGAGGGGGAGGAGGGGCAGCGGCGGCAGCAGCAGATACGGGTGGTGCGGTGCCCCAAGTGCGAGAAGTTCTTGCCGGAGCTCCCCAACTACTCCGTCTACGTCTGCGGCGGATGCGGCGCCACTCTCCAAGCAAAGAAGAACTCAGCATCTGAGAATTCCTCAGAGAAATCTGATGGTGGACATGTGAAGTACCTTGAAGTGCTGGAGAGTTCACCAGATAACAAAGGAGCTGCATCTAAAGACACTTGTGAGGCTGCCCAAGAAGGAGAAGCCAAAAATGGAGAAGCTAAAGCAGAAGAGAGACAGGTACTTCTTGACAGAATGGCAGCTTGTGATGATAGCCGAATTCCAAGAGAACCAAATGCCTTGAAGCTTGAGGCTTCACTTAGAGATGACAGCAGGGAAATTCGGGAGGCCAAGTACCGGCGCATCCGCAGTGAGGACAAAGGAGAAGCAAAACACACAGTGAGAGCCAGAGACAGATCGCCAAGATCAGTTGTTGATGCCATCCCTCCGAATGCATATCCTGCAGAAGGCCCGTCTGACTACCATATTAAGTCAAGATTCAGACATACCAATGGTGAGCAAGCTGATATGAGAAATTTGGAGGGCCTAAACAGAGTCAATGGTCTTGAAAAAGACCGTGCTGATCTGTTACGGATGCTTGATGAGCTGAGGGGTCAGGTGCAGAGATCCTGTGAGATCACCAACAAGCCAAGTGGAAGTACTTCTACAGATAAAGCGGTGGATGCCTCAGGGTTATATAATCCTCGTGAGCGGTTGAGTCGGTTACGACATGGTTCACCTCAGTTGCAGCGGAGTGGTTCTCAGCAGTCACCATCCTTGAATGGGCAAGCTCCTTGCATTCCGCAAGCTTATGCTCCAGGAACTGCTCAGCAAGATCTTCATGGATACGGGGAGCCAATGGCACACATGGGGGCTCCAAGCTATCCTGTTGGCACATATCCATGGAGAAATTTTGATAATTATTTTTATGGACAGTATGATCCTGACCCTCTGATCTCTTACCACCATGATGGCTTCTACCATCAGCCTGCCTGTTCTTGTCTACATTGCTACCACCGTGAGTTCTTACCTGTTCAGGGGCCTCCTCTGGGTTTCAACCATCGCAGGGTACCACCGTATGTTATGAATAATCCTAGAGTTTACCCGGTTGATGGTCCTGCAATGTTTGGCACACAGAATTACAATTCAAGAGTCAACGCTTCAATGCAGCGCAATCACATGAGGGCCGCTATGAGTAAAAAACCTGCACAGACTTGTGAACCGATTGCATGTGGTGCCCCATTCACTATATGCTACAACTGCTATGAAGTACTGCAACTTCCGAAGAAATCCCCCGTGCCAGGGAAGGATGAGTACAAATTACGTTGCGGGTCATGCTCACATGCGCTTGTGGTCAAGCTTGATGGAAGCAGGCTTGATGTTTCAGCACCTTCACCTATTTCACACATATCTGGCGGCAGCAAAATTAGTTCCAATGATGGCCAAGGAAGCAATGCGAATTCTGCTCCACATGAGAGGGTGCTTCCACTTTATAGTTTTTCTGCAGCAAGTCATGGTTCTCAAGACCTACCCTCGAACTCAAGTGAAGCTGAAAAAATGCAAGGGATATCGTCTTCTTGCAGCATTTCTGAAGATGAGAACAGCCCTGCGAGATCTAATTCCCAGAGGGACACCCCTGGGTCTAGGGATCTTCATCCTGAAGCTGAGGTGTCTACCCGTGTTCCAAGTTTACATCTTCGTGATCATTTTGGATACTCGCCATCTGAGAAGGTAGTTGATGGATCAGGGAAAGGAAGCAGAAGTACTCGATCTGAACATGAGAAGGCTGTGTTGACAGAAAGTTTCAAGCAGAACACTGTAAAAGATGTATCAGTAGTGAACATAATGGACTTGTCGGATGATGAGTATGATGATCCTGACTACATGCAAGATCGAGGTGATGTGGCACAACCTGTAGATCACCCTCGGGCCGTGAAAACGGGTGATTCATTTTTCACCAATCTCATAAAGAAGAGCTTCAAAATTAACAACGGAATGGGCAATGGCAGAGCAAAGGTTTTCATTAATGGCTATCCCATCTCTGATCGGGCGGTCAGGAAGGCTGAGAAGATAGCTGGACCAATCTATCCTGGTGAATACTGGTATGATTACCGTGCTGGTTTCTGGGGTGTAATGGGACAGTCTTGCCTCGGCATGATACCGCCATATATTCCAGAACTCAATTATCCTATGCCCAAGAAATGCGCTGCTGGAAATACAGGTGTATTTGTTAATGGGAGAGAACTTCACCAGAAGGATTTGGATTTACTTGTGGGTCGAGGACTCCCAGATTCTCCCGGTAGATCATACAGAGTTGAGATGTCCGGTAAAGTGTCGGATGAAGTCTCTGGTGAGGAGCTGTATTGTCTCGGCAAACTTGCACCAACCGTCGAGAAAATGAAGCGCGGATTTGGCATGAGAGTCCCCAGAATCATCCCTTGAGATCAGTGATTCTTCGGCACAACTGTAGAATTCAAGACCCCATTTTGGATGCTGTTTCGGTTCTTCTGCGAAATGCTTTGATGCTTGTTGGTTGTTGATTGTCCAGCCGTCTGTTTGCGTGGTCTCATGATCTGAGATGTATAATCTGTGGTTGCTTTGACTGGTGCTTGTCTGAAAAATTATCCAATGGAAATTTTGCAATGTGAAGTT ]
[+] EMBL AK104067 [ GTGTTGACAGAAAGTTTCAAGCAGAACACTGTAAAAGATGTATCAGTAGTGAACATAATGGACTTGTCGGATGATGAGTATGATGATCCTGACTACATGCAAGATCGAGGTGATGTGGCACAACCTGTAGATCACCCTCGGGCCGTGAAAACGGGTGATTCATTTTTCACCAATCTCATAAAGAAGAGCTTCAAAATTAACAACGGAATGGGCAATGGCAGAGCAAAGGTTTTCATTAATGGCTATCCCATCTCTGATCGGGCGGTCAGGAAGGCTGAGAAGATAGCTGGACCAATCTATCCTGGTGAATACTGGTATGATTACCGTGCTGGTTTCTGGGGTGTAATGGGACAGTCTTGCCTCGGCATGATACCGCCATATATTCCAGAACTCAATTATCCTATGCCCAAGAAATGCGCTGCTGGAAATACAGGTGTATTTGTTAATGGGAGAGAACTTCACCAGAAGGATTTGGATTTACTTGTGGGTCGAGGACTCCCAGATTCTCCCGGTAGATCATACAGAGTTGAGATGTCCGGTAAAGTGTCGGATGAAGTCTCTGGTGAGGAGCTGTATTGTCTCGGCAAACTTGCACCAACCGTCGAGAAAATGAAGCGCGGATTTGGCATGAGAGTCCCCAGAATCATCCCTTGAGATCAGTGATTCTTCGGCACAACTGTAGAATTCAAGACCCCATTTTGGATGCTGTTTCGGTTCTTCTGCGAAATGCTTTGATGCTTGTTGGTTGTTGATTGTCCAGCCGTCTGTTTGCGTGGTCTCATGATCTGAGATGTATAATCTGTGGTTGCTTTGACTGGTGCTTGTCTGAAAAATTATCCAATGGAAATTTTGCAATGTGAAGTTTGTTTTGTGCTATGAAACCGGGCCATGCTGGAAGTATATATAAAAAATGTCAATTGGTTTTTGACCAGTTAAATTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4254#0 CTCCTCGACCCGCCAAACAGCAGCCCGCTCTTTTGATCTTTTCCTCCCTCTCTTCTTCTC 60
consensus_4254#1 ------------------------------------------------------------
consensus_4254#0 CCTACGAACCACGAGTCGCCGCCAATGGCCTCCTGACAAGGCCTCGTCTCGGTTCTCTGC 120
consensus_4254#1 ---------GAGGGGAAGCTTTGCAT--TTGCCCGGCCGACTCTCTTCTTGGTTCT-TGG 48
* * * ** ** ** * * *** *** ****** **
consensus_4254#0 TCGTGGTTGGGGGCTTCTTGGCGTTCTTGATTTTTTGGTTTGGGTGCC-TTGGTGCTCGT 179
consensus_4254#1 TTGTGGC-GTCGGCGTCTCCGTGTTGTT-------TGGGCTGGCCACCGTTGCTCGCCGT 100
* **** * *** *** * *** ** *** *** ** *** * ***
consensus_4254#0 TCTTGAGGCGTTCGTTTTCCCTTGGTTTGATGCGGCGGCGGTGGTGAGGGTGGGAGCAGC 239
consensus_4254#1 TCTTGGGG-GCAGGC--------------AAACGGCACCGGCGGTA----TGGAGGCATT 141
***** ** * * * **** *** *** *** ***
consensus_4254#0 CGCAGGTCGGGAATGGAAGGGGACGAGGGCGCGGCGGCGGCGGCGA-GGATAAGGCTAGT 298
consensus_4254#1 GGGAGAT-----ATGGAGGGGGAGGAGGG-GCAGCGGCGGCAGCAGCAGATACGGGTGGT 195
* ** * ***** ***** ***** ** ******** ** **** ** * **
consensus_4254#0 GCGGTGCCCCAAGTGCGACAAGTTCTTGCCGGAGCTCCCCGCCTACTCCGTCTACGTCTG 358
consensus_4254#1 GCGGTGCCCCAAGTGCGAGAAGTTCTTGCCGGAGCTCCCCAACTACTCCGTCTACGTCTG 255
****************** ********************* ******************
consensus_4254#0 CGGCGGCTGCGGCGCCGCTCTCCAAGCAAAGAAGAAGTACTCAGCCCAAGGTTCT---GA 415
consensus_4254#1 CGGCGGATGCGGCGCCACTCTCCAAGCAAAGAAGAACTCAGCATCTGAGAATTCCTCAGA 315
****** ********* ******************* * ** * * *** **
consensus_4254#0 TAACTCTGATAATGGACATGTGAAGTACCTTGAGGTACTAGAGAGT-------GTTGCGG 468
consensus_4254#1 GAAATCTGATGGTGGACATGTGAAGTACCTTGAAGTGCTGGAGAGTTCACCAGATAACAA 375
** ****** ********************* ** ** ****** * *
consensus_4254#0 AGGCGC-----CTGAAGCAATGGATGGTGCTACCGCTGATGGTAGATCTATACCCAATAG 523
consensus_4254#1 AGGAGCTGCATCTAAAGACACTTGTGAGGCTGCCCAAGAAGGAGAAGCCAAAAATGGAGA 435
*** ** ** *** * ** *** ** ** ** * * * *
consensus_4254#0 AATTTCAGCTTTGCACAGTAGATCAGTTTACAAC------------CATGAAGACAATCG 571
consensus_4254#1 AGCTAAAGCAGAAGAGAGACAGGTACTTCTTGACAGAATGGCAGCTTGTGATGATAGCCG 495
* * *** * ** * ** ** *** ** * **
consensus_4254#0 AATGGCAAGAGGTCCAAGTACTTCAACAGGTGAAGCTACTATTAGAAACGATGGTAGGGA 631
consensus_4254#1 AATTCCAAGAGAACCAAATGCCTTGAAGCTTGAGGCTTCACTTAGAGATGACAGCAGGGA 555
*** ****** **** * * * * *** *** * ***** * ** * *****
consensus_4254#0 ---------GGCAAAGTACATGCGCATCCGTAATGTGGAAAATGCTGACATGATGAAATC 682
consensus_4254#1 AATTCGGGAGGCCAAGTACCGGCGCATCCGCAGTGAGGACAAAGGAGAAGCAAAACACAC 615
*** ****** ********* * ** *** ** * ** * * *
consensus_4254#0 AGTAAGAGGAAGAGGTATATCTGACATATCTCCGAGGTCTCCAATCGATGGAATTCCACC 742
consensus_4254#1 AGTGAGAGCCAGAG---------ACAGATCGCCAAGATCAGTTGTTGATGCCATCCCTCC 666
*** **** **** *** *** ** ** ** * **** ** ** **
consensus_4254#0 CACCTCTTACCAAGCGGAAAGCCTTGTCAACTACCAATTACAGTCAAAATACAGATTCTC 802
consensus_4254#1 GAATGCATATCCTGCAGAAGGCCCGTCTGACTACCATATTAAGTCAAGATTCAGACATAC 726
* * ** * ** *** *** ******* * ****** ** **** *
consensus_4254#0 CAACAGGGAGCATGCCAATGATAGGGACTTGGATGGTCCAAGCAGAGTTAGGGGCCTTGA 862
consensus_4254#1 CAATGGTGAGCAAGCTGATATGAGAAATTTGGAGGGCCTAAACAGAGTCAATGGTCTTGA 786
*** * ***** ** ** ** * ***** ** * ** ****** * ** *****
consensus_4254#0 GAAAGATCGTGCTGAGCTCTTGAAGATGCTTGATGAGTTGAGAGACCAGGTGCAGCAATC 922
consensus_4254#1 AAAAGACCGTGCTGATCTGTTACGGATGCTTGATGAGCTGAGGGGTCAGGTGCAGAGATC 846
***** ******** ** ** ************* **** * ********* ***
consensus_4254#0 ATGTGAGGTTACTGATGCACCAAGTAGAAGTGCTACAACTAATAGACCTGCAGATGCCTC 982
consensus_4254#1 CTGTGAGATCACCAACAAGCCAAGTGGAAGTACTTCTACAGATAAAGCGGTGGATGCCTC 906
****** * ** * ****** ***** ** * ** *** * * * ********
consensus_4254#0 AAGTTCACATGGTGCGCATGATCAGCCAAATCAGCTGAGGCATGATCCATCTGTATTGCA 1042
consensus_4254#1 AGGGTTATATAATCCTCGTGAGCGGTTGAGTCGGTTACGACATGGTTCACCTCAGTTGCA 966
* * * * ** * * * *** * * * ** * * * **** * ** ** *****
consensus_4254#0 TTGGAATGGTTCTCATCACTCGCCATCCTTGAATGTGCAAAGTCCTAATATCCCACAAGT 1102
consensus_4254#1 GCGGAGTGGTTCTCAGCAGTCACCATCCTTGAATGGGCAAGCTCCTTGCATTCCGCAAGC 1026
*** ********* ** ** ************* **** **** ** ** ****
consensus_4254#0 CCATGCTCCATTGCCTACTCGACAGAATCTTCATGGATATGCAGAGCCCATCCCGCATGC 1162
consensus_4254#1 TTATGCTCCAGGAACTGCTCAGCAAGATCTTCATGGATACGGGGAGCCAATGGCACACAT 1086
******** ** *** ** ************* * ***** ** * **
consensus_4254#0 GAGAGCCTCTAGCTATCATGCTGGTGCTGGTTACCCCTGCAGAAATGTTGATAATTTCTT 1222
consensus_4254#1 GGGGGCTCCAAGCTATCCTGTTGGCACA---TATCCATGGAGAAATTTTGATAATTATTT 1143
* * ** * ******* ** *** * ** ** ** ****** ********* **
consensus_4254#0 CTTTGGACATCATGATCCTGACCCTTTGCTCTCATGTCACCATGAAGGCTTGTACCATCA 1282
consensus_4254#1 TTATGGACAGTATGATCCTGACCCTCTGATCTCTTACCACCATGATGGCTTCTACCATCA 1203
* ****** ************** ** **** * ******** ***** ********
consensus_4254#0 GCCCGTCTGTTCTTGCTTCAATTGTTACCACCGAGAGTTTTTGCCTGTACAGGGAACTCC 1342
consensus_4254#1 GCCTGCCTGTTCTTGTCTACATTGCTACCACCGTGAGTTCTTACCTGTTCAGGGGCCTCC 1263
*** * ********* * **** ******** ***** ** ***** ***** ****
consensus_4254#0 CCTTGGTTTTACTGATCAAAGGGCACCA---TACCTTATGAACAGTTATGGAGCATATCC 1399
consensus_4254#1 TCTGGGTTTCAACCATCGCAGGGTACCACCGTATGTTATGAATAATCCTAGAGTTTACCC 1323
** ***** * *** **** **** ** ******* * * * *** ** **
consensus_4254#0 TGTAGAGGGTCCCCTA---TATGGTCAGCAGAGATACACTTCAAGAGGTACTAATACTTC 1456
consensus_4254#1 GGTTGATGGTCCTGCAATGTTTGGCACACAGAATTACAATTCAAGAG---TCAACGCTTC 1380
** ** ***** * * *** **** **** ******** ** ****
consensus_4254#0 TTTACAGAGGAATCACCTGAGGACCAATGTAAGGAAGAAACCGGCACAAACTTGTGAGCC 1516
consensus_4254#1 AATGCAGCGCAATCACATGAGGGCCGCTATGAGTAAAAAACCTGCACAGACTTGTGAACC 1440
* *** * ****** ***** ** * * ** ** ***** ***** ******** **
consensus_4254#0 GATTGCAGGTGGTGCCCCTTTCACCATATGCTACAATTGCTATGAAGTGCTGCGAATACC 1576
consensus_4254#1 GATTGCATGTGGTGCCCCATTCACTATATGCTACAACTGCTATGAAGTACTGCAACTTCC 1500
******* ********** ***** *********** *********** **** * * **
consensus_4254#0 AATGAAACATTCTTTGTTGGGAAAGGA---GTATAAGCTGATGTGTGGATCATGCTCACA 1633
consensus_4254#1 GAAGAAATCCCCCGTGCCAGGGAAGGATGAGTACAAATTACGTTGCGGGTCATGCTCACA 1560
* **** * ** ** ***** *** ** * ** ** ***********
consensus_4254#0 TGCAATTCTAGTCAACCTTGATGGAAGCAGGCTCAATGTTTCAGAACCTGCGCCCGGTAT 1693
consensus_4254#1 TGCGCTTGTGGTCAAGCTTGATGGAAGCAGGCTTGATGTTTCAGCACCTTCACCTATTTC 1620
*** ** * ***** ***************** ********* **** * ** *
consensus_4254#0 AAATTTATCTGCTGCACTGCAAAAT-GGTATTGGTGATAGCATGAGAAACAATGGGCATG 1752
consensus_4254#1 ACACATATCTGGCG-GCAGCAAAATTAGTTCCAATGATGGCCAAGGAAGCAATGCGAATT 1679
* * ****** * * ******* ** **** ** *** ***** * **
consensus_4254#0 CTAATGCTGATGAGAGGTTGCTTCCACAATATTGTTTTTCTAATGGAAGTCATGAATCTC 1812
consensus_4254#1 CTGCTCCACATGAGAGGGTGCTTCCACTTTATAGTTTTTCTGCAGCAAGTCATGGTTCTC 1739
** * * ******** ********* *** ******** * ******** ****
consensus_4254#0 AAGAAAAAGATCTAGAATCAAATTCAAGTGAA---------------------------- 1844
consensus_4254#1 AAGACCTACCCTCGAACTCAAGTGAAGCTGAAAAAATGCAAGGGATATCGTCTTCTTGCA 1799
**** * * **** * * ****
consensus_4254#0 -----TCAGATAGCAAACACACTCCTCTAGGGACTGATTCTGAAA---ATACTCCCCAGT 1896
consensus_4254#1 GCATTTCTGAAGATGAGAACAGCCCTGCGAGATCTAATTCCCAGAGGGACACCCCTGGGT 1859
** ** * *** *** * ** **** * * * ** ** **
consensus_4254#0 CCAGGGATCTTCCTTCTGAAGCCAATGTAATTTCCCATGTACCAAGTTTACCGCATCATG 1956
consensus_4254#1 CTAGGGATCTTCATCCTGAAGCTGAGGTGTCTACCCGTGTTCCAAGTTTACATCTTCGTG 1919
* ********** * ******* * ** * *** *** ********** * ** **
consensus_4254#0 ATCGTTGTGGATTCTCACCATC--GGAAGAT----------TCTGGAAAGGGAAGTAGAA 2004
consensus_4254#1 ATCATTTTGGATACTCGCCATCTGAGAAGGTAGTTGATGGATCAGGGAAAGGAAGCAGAA 1979
*** ** ***** *** ***** **** * ** ** ** ***** ****
consensus_4254#0 GTACCCATTCTGAACATGAAAAGGCTACCCTATTTACTGAAAGTTGCAAACGGAACTCAA 2064
consensus_4254#1 GTACTCGATCTGAACATGAGAAGGCTG---TGTTGACAGAAAGTTTCAAGCAGAACACTG 2036
**** * *********** ****** * ** ** ******* *** * **** *
consensus_4254#0 TTAAAGATGTATGTGTAGCCAATGAGACACAGTCTCCAGTCGATGAGTTTGATGATACTT 2124
consensus_4254#1 TAAAAGATGTATCAGTAGTGAACATAATGGACTTGTCGGATGATGAGTATGATGATCCTG 2096
* ********** **** ** * * * * * ******* ******* **
consensus_4254#0 TATATGCACAAGATATGCTAAATTTGCCACAAAATGTTGGCCATACTAGGTCTACAAAGG 2184
consensus_4254#1 ACTACATGCAAGATCGAGGTGATGTGGCACAACCTGTAGATCACCCTCGGGCCGTGAAAA 2156
** ****** ** ** ***** *** * ** ** ** * **
consensus_4254#0 CAGGCGATTCATTTCTAACCAATCTCATTAAAAGGAGCTTCAAAATGAACAATGGAACAC 2244
consensus_4254#1 CGGGTGATTCATTTTTCACCAATCTCATAAAGAAGAGCTTCAAAATTAACAACGGAATGG 2216
* ** ********* * *********** ** * ************ ***** ****
consensus_4254#0 GCAATGGAAGAGCAAGGATTTTTGTTAATGGCTTTCCTATCTCTGACCGTGCAGTCAGGA 2304
consensus_4254#1 GCAATGGCAGAGCAAAGGTTTTCATTAATGGCTATCCCATCTCTGATCGGGCGGTCAGGA 2276
******* ******* * **** ********* *** ******** ** ** *******
consensus_4254#0 AGGCTGAGAAGCTAGCTGGAGAAATCTGTCCTGGTGATTACTGGTATGATTATCGTGCTG 2364
consensus_4254#1 AGGCTGAGAAGATAGCTGGACCAATCTATCCTGGTGAATACTGGTATGATTACCGTGCTG 2336
*********** ******** ***** ********* ************** *******
consensus_4254#0 GGTTCTGGGGTGTTATGGGGCGACCCTGCCTTGGCATGATACCTCCTTATATTCCAGAGT 2424
consensus_4254#1 GTTTCTGGGGTGTAATGGGACAGTCTTGCCTCGGCATGATACCGCCATATATTCCAGAAC 2396
* *********** ***** * * ***** *********** ** ***********
consensus_4254#0 TCAATTATCCTATGCCCAAGAACTGTGGTGGTGGAAACACCGGCATATTTATTAATGGGA 2484
consensus_4254#1 TCAATTATCCTATGCCCAAGAAATGCGCTGCTGGAAATACAGGTGTATTTGTTAATGGGA 2456
********************** ** * ** ****** ** ** ***** *********
consensus_4254#0 GAGAACTTCATCAGAAGGATTTGGATCTACTTGTGTCTCGAGGACTGTCTGATTCCCCTG 2544
consensus_4254#1 GAGAACTTCACCAGAAGGATTTGGATTTACTTGTGGGTCGAGGACTCCCAGATTCTCCCG 2516
********** *************** ******** ********* * ***** ** *
consensus_4254#0 GCAGATCTTATATAGTTGAAAATTCTGGGAAAGTTTCAGATGAAGTTTCTGGTGAAGAGC 2604
consensus_4254#1 GTAGATCATACAGAGTTGAGATGTCCGGTAAAGTGTCGGATGAAGTCTCTGGTGAGGAGC 2576
* ***** ** * ****** * ** ** ***** ** ******** ******** ****
consensus_4254#0 TTTATGGCCTTGGCAAGCTTGCACCGACTGTGGAGAAAATGAGGCGCGGATTTGGCATGC 2664
consensus_4254#1 TGTATTGTCTCGGCAAACTTGCACCAACCGTCGAGAAAATGAAGCGCGGATTTGGCATGA 2636
* *** * ** ***** ******** ** ** ********** ****************
consensus_4254#0 GAGTCCCAAGAATCATCCAGTGACAAACTGACGGGTCAATACAATACATTCACAAGCTCT 2724
consensus_4254#1 GAGTCCCCAGAATCATCCCTTGA--GATCAGTGATTC--TTCGGCACAACTGTAGAAT-T 2691
******* ********** *** * * ** * * *** * * *
consensus_4254#0 GGAGATGCTAAGGGACAAGCCAATGCCATAGCTCATAGCTGCAGCTCACACAAGTCACAA 2784
consensus_4254#1 CAAGACCCCATTTTGGATGC---TGTTTCGGTTCTT--CTGCGAAATGCTTTGATGCTTG 2746
*** * * * ** ** * ** * **** * *
consensus_4254#0 CAGGGTGACTTGAGTTTTCCAAGAATACTGTTTCTAGTTTAGCTCGTGAATCTAGTTATC 2844
consensus_4254#1 TTGGTTG--TTGA-TTGTCCAGCCGT-CTGTTTGCG--TGGTCTCATGATCTGAGATGT- 2799
** ** **** ** **** * ****** * *** *** ** * *
consensus_4254#0 GTCCTCCTTTCTTGTTGCCTGATTGTGCTGCCCCTTCAGATGTCATATGGAGGCATTCTT 2904
consensus_4254#1 ATAATCTGTGGTTGCT--TTGACTG-GTGCTTGTCTGAAAAATTATCCAATGGAAATTTT 2856
* ** * *** * *** ** * * * * * ** ** * * **
consensus_4254#0 GTAGTTTTCTAGTGTATTTGTGATTTCTTTTCGACCTGGTACAATGATTTTAGGGGGGGG 2964
consensus_4254#1 GCAATGTGAAGTTTGTTTTGTGCTATGAAACCGGGCCA-TGCTGGAAGTATATATAAAAA 2915
* * * * * ****** * * ** * * * * * **
consensus_4254#0 GGGGGGAGGAGGGAGGTAGTCAATTGAATTTGTTTGGTTTGCATTCTAACATGTATTATG 3024
consensus_4254#1 ATGTCAATT-GGTTTTTGACCAGTTAAATTTG---------------------------- 2946
* * ** * ** ** ******
consensus_4254#0 CACCTTCGAAGAATGATGTTGAAATGCATGACAAAACGCATCAAAATGAGCTCAATTAGA 3084
consensus_4254#1 ------------------------------------------------------------
consensus_4254#0 AGGTACAGGAAGGAGTTGCTGGGGAT 3110
consensus_4254#1 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||