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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2099 fasta sequence
[ACTAGCTGAGCACTGAGCCAGTGAGCTCTGCCACTCGTAGTAGTCGATCGCCGGCGATCGATCTTGCCTCGCCGGAGAAGGAGAGAAGACGTCACGCCGGCGGCGGCACATGAAGCGGCACAACACGGCGGAGGTGCCGGTGCCGGTGAGCTACGGCGGCAAGGTGGAGAAGACGATGGGTGGGGCTAAGCAGGGGCGCGGCGGCGGCGGCGGCTGCTGCTCCCGCCTCTGGTTCATGGTCGTTCTCTCCGCCACCGTGACGCTGCTGGTGCGCCACTGCTACGACTCCGGCGTGATCGGCCACGGCGCCGTCGCCGGCGGCGTGGTGCGCATCGAGCCGGTGCACCGTGGTTTGTACCACACTCGGAAGGCGAGCCCGGTGGATCGCGGCGGCGGCGGCGGCGGCACGTCGTTCTCTGGCCATTCGCCGTCGCCGCCCGACGCCGGCGGCAGCGCGAAGCCGGAGTCTCCGCACGACAGCGGCGTCAAGGCGCCGTCGGAGCTGACCACCGTCGAGCACACCAAGCAGCCGTCCGAGCCAGCTTCTACCGGCACGGAGTCGGATGATGGAGGCAAGCCATCGTCGGCGTCGTCATCCTCGCTGCCGGCGGCGGCGCACCCGTTCGCGCGCGCGCTCGCGGCGGCGGGCGACAAGGGCGACCGGTGCGGCGGGCGGTACGTGTACGTGCAGGAGCTGCCACCGCGGTTCAACACCGACATGGTAAAGAACTGCGCGACGCTGTTCCCGTGGACGGACATGTGCGCGTTCACGGCGAACGGCGGCTTCGGCCCGCAGATGAGCGGCGGCGACGGCGGCGTGTTCCAGGAGACCGGGTGGTACAACTCCGACCAGTACACGGTGGACATCATCTTCCACGACCGGATCAGGCGGTACGAGTGCCTCACCGACGACCCCTCCCTCGCCGCCGCCGTGTACGTGCCGTTCTTCGCCGGCCTCGAGGTGGCGCGCCACCTCTGGGGGTTCAACGTCACCACCCGGGACGCCATGGCGCTGGAGGTGGTGGACATCATCACGTCGCGGTCCGAGTGGCGCGCCATGGGAGGCCGCGACCACTTCTTCACCGCCGGCCGCACCACGTGGGACTTCCGGAGGCTGAACGACGGCGACGCCGGCTGGGGCAGCAAGCTGTTCAGCCTTCCGGCGATCAAGAACATGACGGCGCTCGTGGTGGAGGCGAGCCCGTGGCACCTCAACGACGCCGCCATCCCGTTCCCGACTGCGTTCCACCCGGCGAGCGACGAGGCCGTGTTCGTCTGGCAGGACAAGGTCCGCCGCCTCGAGCGCCCATGGCTCTTCTCCTTCGCCGGCGCGGCGCGCCCGGGCAGCGCCAAGTCCATCCGTTCCGAGCTCATCGCGCAGTGCAGGGCGTCGAGCGTGTGCTCCCTGATGGAGTGCGCCGACGGGCCGAGCAACAAGTGCGGCTCGCCGGCGAGCTACATGAGGCTGTTCCAGAGCTCCACCTTCTGCCTCCAGCCGCAGGGCGACTCGTACACGCGCAAGTCGGCGTTCGACGCCATGCTCGCCGGCTGCATCCCGGTGTTCTTCCACCCCGGCACGGCGTACGTCCAGTACACCTGGCACCTGCCCAGGAACCACGCCGACTACTCCGTCTACATCTCCGAGGACGACGTGCGCCGCAACGCCAGCATCGAGGAGCGGCTGCGGCGGATCGCGCCGGCCGCCGTGGAGCGGATGAGGGAGACGGTCATCTCGCTCATCCCGACGGTGGTGTACGCGCAGCCGTCGTCGAGGCTGGACACGATGAAGGACGCGTTCGACGTGGCGGTGGACGCCATCGTCGACAAGGTGACGAGGCTGCGGCGCGACATCGTCGACGGCCGCGGCGAGGAGGAGAAGCTGGAGATGTACAGCTGGAAGTATCCATTGCTGCGAGAAGGGCAGAAGGTCGAGGACCCCCATGAGTGGGATCCATTGTTCGCGTTCGGTTAGGTCATCGTTTCTATTACTTTCTACTGTCACACTGTTACACAATACAAGGTTAATTACGTGTTTGAAAGAAGTTTGGGAATACTTGTAATGCAATGGAACGAATAATTTCCAGTTTTACCAAAAGATG]
[+] EMBL AK110328 [ACTAGCTGAGCACTGAGCCAGTGAGCTCTGCCACTCGTAGTAGTCGATCGCCGGCGATCGATCTTGCCTCGCCGGAGAAGGAGAGAAGACGTCACGCCGGCGGCGGCACATGAAGCGGCACAACACGGCGGAGGTGCCGGTGCCGGTGAGCTACGGCGGCAAGGTGGAGAAGACGATGGGTGGGGCTAAGCAGGGGCGCGGCGGCGGCGGCGGCTGCTGCTCCCGCCTCTGGTTCATGGTCGTTCTCTCCGCCACCGTGACGCTGCTGGTGCGCCACTGCTACGACTCCGGCGTGATCGGCCACGGCGCCGTCGCCGGCGGCGTGGTGCGCATCGAGCCGGTGCACCGTGGTTTGTACCACACTCGGAAGGCGAGCCCGGTGGATCGCGGCGGCGGCGGCGGCGGCACGTCGTTCTCTGGCCATTCGCCGTCGCCGCCCGACGCCGGCGGCAGCGCGAAGCCGGAGTCTCCGCACGACAGCGGCGTCAAGGCGCCGTCGGAGCTGACCACCGTCGAGCACACCAAGCAGCCGTCCGAGCCAGCTTCTACCGGCACGGAGTCGGATGATGGAGGCAAGCCATCGTCGGCGTCGTCATCCTCGCTGCCGGCGGCGGCGCACCCGTTCGCGCGCGCGCTCGCGGCGGCGGGCGACAAGGGCGACCGGTGCGGCGGGCGGTACGTGTACGTGCAGGAGCTGCCACCGCGGTTCAACACCGACATGGTAAAGAACTGCGCGACGCTGTTCCCGTGGACGGACATGTGCGCGTTCACGGCGAACGGCGGCTTCGGCCCGCAGATGAGCGGCGGCGACGGCGGCGTGTTCCAGGAGACCGGGTGGTACAACTCCGACCAGTACACGGTGGACATCATCTTCCACGACCGGATCAGGCGGTACGAGTGCCTCACCGACGACCCCTCCCTCGCCGCCGCCGTGTACGTGCCGTTCTTCGCCGGCCTCGAGGTGGCGCGCCACCTCTGGGGGTTCAACGTCACCACCCGGGACGCCATGGCGCTGGAGGTGGTGGACATCATCACGTCGCGGTCCGAGTGGCGCGCCATGGGAGGCCGCGACCACTTCTTCACCGCCGGCCGCACCACGTGGGACTTCCGGAGGCTGAACGACGGCGACGCCGGCTGGGGCAGCAAGCTGTTCAGCCTTCCGGCGATCAAGAACATGACGGCGCTCGTGGTGGAGGCGAGCCCGTGGCACCTCAACGACGCCGCCATCCCGTTCCCGACTGCGTTCCACCCGGCGAGCGACGAGGCCGTGTTCGTCTGGCAGGACAAGGTCCGCCGCCTCGAGCGCCCATGGCTCTTCTCCTTCGCCGGCGCGGCGCGCCCGGGCAGCGCCAAGTCCATCCGTTCCGAGCTCATCGCGCAGTGCAGGGCGTCGAGCGTGTGCTCCCTGATGGAGTGCGCCGACGGGCCGAGCAACAAGTGCGGCTCGCCGGCGAGCTACATGAGGCTGTTCCAGAGCTCCACCTTCTGCCTCCAGCCGCAGGGCGACTCGTACACGCGCAAGTCGGCGTTCGACGCCATGCTCGCCGGCTGCATCCCGGTGTTCTTCCACCCCGGCACGGCGTACGTCCAGTACACCTGGCACCTGCCCAGGAACCACGCCGACTACTCCGTCTACATCTCCGAGGACGACGTGCGCCGCAACGCCAGCATCGAGGAGCGGCTGCGGCGGATCGCGCCGGCCGCCGTGGAGCGGATGAGGGAGACGGTCATCTCGCTCATCCCGACGGTGGTGTACGCGCAGCCGTCGTCGAGGCTGGACACGATGAAGGACGCGTTCGACGTGGCGGTGGACGCCATCGTCGACAAGGTGACGAGGCTGCGGCGCGACATCGTCGACGGCCGCGGCGAGGAGGAGAAGCTGGAGATGTACAGCTGGAAGTATCCATTGCTGCGAGAAGGGCAGAAGGTCGAGGACCCCCATGAGTGGGATCCATTGTTCGCGTTCGGTTAGGTCATCGTTTCTATTACTTTCTACTGTCACACTGTTACACAATACAAGGTTAATTACGTGTTTGAAAGAAGTTTGGGAATACTTGTAATGCAATGGAACGAATAATTTCCAGTTTTACCAAAAGATG]
consensusID : consensus_4256#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1957 fasta sequence
[GTGAGCTACTGAGCAGTGACCACTAGTAGGTTCTACTCGTCGGCAACCGATCTTGCCTCGCCGGAGAAGACAACGCCCGCGGCGGCGGCGGCGGCGACGCTCTCCTTTTGATGCTCTCATGAAGCGGCACAACGCGGCGGAGGTGCCGGTGCCGGTGAGCTACGGCGGCGAGCGGGATGAGAAGACCGGAAGCAAGGTGGATAAGATGGGTGGTGGAGCGGCTAGGCGGTGGCGGAGCGGCGGCTGCTGCTCCCGCCTCTGGCTCGTGCTCGTCGTGTTCGCCACCGTCACGATGCTGCTGCGCCACCGCTACGACTCCGGCCTCGGCCATGGTGCCGCCGCCGTGGTGCGCATCGAGCCGGTGCACCGGAAGGTGAAGCCAGCCGATCGCGGCGGCGCCAGGCCGTCGTTCTCCGATTCCGGCAGCGCGAAGCCGGTCACCGTCGACCACAAGTCGGCGACGACCGATTCTTCTACCGGAACGGAGTCTGACGGTGGAGGCGAGCCATCGTCGGCGTCATCTTCGCTGCCGGCGGCGGCGCACCCGTTCTCGCGCGCGCTCGCGGCGGCGGGCGACAAGGGCGACCGGTGCGGCGGGCGGTACGTGTACGTGCAGGAGCTGCCTCCGCGGTTCAACACCGACATGGTCAAGAACTGCGTGGCTCTGTTCCCGTGGAAAGACATGTGCAAGTTCACGGCGAACGGCGGCTTCGGCCCGCCGATGAGCGGCGGCGGCGGCATGTTCCAGGAGACCGGGTGGTACAACTCCGACAAGTACACGGTGGACATCATCTTCCACGAGCGGATGAGGCGGTACGAGTGCCTCACCGACGACCCCTCCCTGGCCGCCGCCGTGTACGTGCCGTTCTTCGCCGGCCTCGAGGTGTGGCGCCACCTCTGGGGGTTCAACGCCACCGCGCGGGACGCCATGGCGCTGGAGGTGGTGGACATCATCACGTCGCGGCCCGAGTGGCGCGCCATGGGAGGCCGCGACCACTTCTTCACCGCCGGCCTCATCACGTGGGACTTCCGGAGGCTGGCCGACGGCGACGCCGGCTGGGGGAGCAAGCTGTTCAGCCTTCCGGCGATAAAGAACATGACGGCGCTCGTGGTGGAGGCGAGCCCGTGGCACCTCAACGACGCCGCCATCCCGTTCCCGACGGCGTTCCACCCGGCGAGCGACGAGGCCGTGTTCGTCTGGCAGGACAAGGTCCGCCGCCTCGAGCGCCCATGGCTCTTCTCCTTCGCCGGCGCGGCGCGCCCGGGCAGCGCCAAGTCGATCCGTTCCGAGCTCATCACGCAGTGCAGGGCGTCGAGCGCGTGCTCACTCATGGAGTGCCGCGACGGGCCGAGCAACAAGTGCGGCTCGGCGGCGAGCTACATGAGACTCTTCCAGAGCTCCACCTTCTGCCTCCAGCCGCAGGGCGACTCATACACGCGCAAGTCGGCGTTCGACGCCATGCTCGCCGGCTGCATCCCGGTGTTCTTCCACCCCGGCACGGCGTACGTCCAGTACACCTGGCACCTGCCCAGGAACCACGCCGACTACTCCGTCTACATCTCCGAGGACGACGTGCGCCGCAACGCCAGCATCGAGGAGCGGCTGCGGCGGATCGCGCCGGCCGCCGTGGAGCGGATGAGGGAGACGGTCATCTCGCTCATCCCGACGGTGGTGTACGCGCAGCCGTCGTCGAGGCTGGACACGATGAAGGACGCGTTCGACGTGGCGGTGGACGCCATCGTCGACAAGGTGACGAGGCTGCGGCGCGACATCGTCGACGGCCGCGGCGAGGAGGAGAAGCTGGAGATGTACAGCTGGAAGTATCCATTGCTGCGAGAAGGGCAGAAGGTCGAGGACCCCCATGAGTGGGATTCATTGTTCGCGTTCGCCTAGCTCACCATTTCTACCAATTAAATTTGACCTTCATGTTTGTGAAGTGATCTATCACAAATTAAA]
[+] EMBL AK110989 [GTGAGCTACTGAGCAGTGACCACTAGTAGGTTCTACTCGTCGGCAACCGATCTTGCCTCGCCGGAGAAGACAACGCCCGCGGCGGCGGCGGCGGCGACGCTCTCCTTTTGATGCTCTCATGAAGCGGCACAACGCGGCGGAGGTGCCGGTGCCGGTGAGCTACGGCGGCGAGCGGGATGAGAAGACCGGAAGCAAGGTGGATAAGATGGGTGGTGGAGCGGCTAGGCGGTGGCGGAGCGGCGGCTGCTGCTCCCGCCTCTGGCTCGTGCTCGTCGTGTTCGCCACCGTCACGATGCTGCTGCGCCACCGCTACGACTCCGGCCTCGGCCATGGTGCCGCCGCCGTGGTGCGCATCGAGCCGGTGCACCGGAAGGTGAAGCCAGCCGATCGCGGCGGCGCCAGGCCGTCGTTCTCCGATTCCGGCAGCGCGAAGCCGGTCACCGTCGACCACAAGTCGGCGACGACCGATTCTTCTACCGGAACGGAGTCTGACGGTGGAGGCGAGCCATCGTCGGCGTCATCTTCGCTGCCGGCGGCGGCGCACCCGTTCTCGCGCGCGCTCGCGGCGGCGGGCGACAAGGGCGACCGGTGCGGCGGGCGGTACGTGTACGTGCAGGAGCTGCCTCCGCGGTTCAACACCGACATGGTCAAGAACTGCGTGGCTCTGTTCCCGTGGAAAGACATGTGCAAGTTCACGGCGAACGGCGGCTTCGGCCCGCCGATGAGCGGCGGCGGCGGCATGTTCCAGGAGACCGGGTGGTACAACTCCGACAAGTACACGGTGGACATCATCTTCCACGAGCGGATGAGGCGGTACGAGTGCCTCACCGACGACCCCTCCCTGGCCGCCGCCGTGTACGTGCCGTTCTTCGCCGGCCTCGAGGTGTGGCGCCACCTCTGGGGGTTCAACGCCACCGCGCGGGACGCCATGGCGCTGGAGGTGGTGGACATCATCACGTCGCGGCCCGAGTGGCGCGCCATGGGAGGCCGCGACCACTTCTTCACCGCCGGCCTCATCACGTGGGACTTCCGGAGGCTGGCCGACGGCGACGCCGGCTGGGGGAGCAAGCTGTTCAGCCTTCCGGCGATAAAGAACATGACGGCGCTCGTGGTGGAGGCGAGCCCGTGGCACCTCAACGACGCCGCCATCCCGTTCCCGACGGCGTTCCACCCGGCGAGCGACGAGGCCGTGTTCGTCTGGCAGGACAAGGTCCGCCGCCTCGAGCGCCCATGGCTCTTCTCCTTCGCCGGCGCGGCGCGCCCGGGCAGCGCCAAGTCGATCCGTTCCGAGCTCATCACGCAGTGCAGGGCGTCGAGCGCGTGCTCACTCATGGAGTGCCGCGACGGGCCGAGCAACAAGTGCGGCTCGGCGGCGAGCTACATGAGACTCTTCCAGAGCTCCACCTTCTGCCTCCAGCCGCAGGGCGACTCATACACGCGCAAGTCGGCGTTCGACGCCATGCTCGCCGGCTGCATCCCGGTGTTCTTCCACCCCGGCACGGCGTACGTCCAGTACACCTGGCACCTGCCCAGGAACCACGCCGACTACTCCGTCTACATCTCCGAGGACGACGTGCGCCGCAACGCCAGCATCGAGGAGCGGCTGCGGCGGATCGCGCCGGCCGCCGTGGAGCGGATGAGGGAGACGGTCATCTCGCTCATCCCGACGGTGGTGTACGCGCAGCCGTCGTCGAGGCTGGACACGATGAAGGACGCGTTCGACGTGGCGGTGGACGCCATCGTCGACAAGGTGACGAGGCTGCGGCGCGACATCGTCGACGGCCGCGGCGAGGAGGAGAAGCTGGAGATGTACAGCTGGAAGTATCCATTGCTGCGAGAAGGGCAGAAGGTCGAGGACCCCCATGAGTGGGATTCATTGTTCGCGTTCGCCTAGCTCACCATTTCTACCAATTAAATTTGACCTTCATGTTTGTGAAGTGATCTATCACAAATTAAA]
consensusID : consensus_4256#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1522 fasta sequence
[AGCTCAGGAGGCTCCCGTCCGCACGCGACGTCACGACGACGACGGCGGCGGCGGTGGCTGGGGACGCGCACGCCTGCGAGGGGCGGTACGTGTACATCCACGACCTGCCGCCGCGGTTCAACGACGACATCCTCCGCAACTGCCGCGAGTGGTACCAGTGGATCAACATGTGCGTGTACCTCAGCAACGGCGGCCTCGGCGAGCCGGTGGACAACGCGGACGGCGCGTTCGCCGACGAGGGGTGGTACGCCTCGGACCACTTCGGCCTCGACGTCATCTTCCACAGCCGCATCAAGCAGTACGAGTGCCTCACCGACGACTCCTCCCGCGCCGCCGCCGTCTTCGTGCCGTTCTACGCCGGCTTCGACGTCGTGCAGCACCTGTGGGGCAGCAACGCGTCGGTCAAGGACGCCGCGTCGCTGGAGCTCGTCGACTGGCTCACGCGTCGCCCCGAGTGGCGCTCCATGGGCGGCCGCGACCACTTCGTGATGTCCGGGAGGACGGCGTGGGACCACCAGCGGCAGACGGACAGCGACTCGGAGTGGGGCAACAAGTTCCTCCGGCTGCCGGCCGTGCAGAACATGACGGTGCTCTTCGTCGAGAAGACGCCATGGACGGAGCACGACTTCGCCGTGCCGTACCCGACCTACTTCCACCCGGCGAAGGACGCCGAGATCTTCCAGTGGCAGCAGCGGATGCGCGGCATGAAGCGCGAGTGGCTCTTCACCTTCGCCGGCGGCACGCGCCCCGGTGACCCCAACTCCATCCGGCACCACCTCATCCGGCAATGCGGCGCGTCCAGCCTCTGCAACCTGATCCAGTGCCGGAAGGGCGAGAAGAAGTGCCTCATCCCGAGCACGTTCATGCGCGTGTTCCAGGGCACGCGCTTCTGCCTGCAGCCGCCGGGCGACACGTACACGCGGCGGTCGGCGTTCGACGCCATGCTCGCCGGCTGCGTGCCGGTGTTCTTCCACCCGGCGTCCGCGTACACGCAGTACAAGTGGCACCTCCCCGACGTGCACGAAACCTACTCGGTGTTCATCGCCGAGGAGGACATCCGCAGCGGCAACGTGAGCGTAGAGGAGACGCTCCGGAGGATCCCGCCGGACGTCGCGGAGAAGATGACGGAGACGGTGATCAGCCTCGTGCCGAGGCTGCTCTACGCGGACCCTAGGTCGAAGCTGGAGACGGTCAAGGACGCCGTGGATTTGACGGTGGAGGCGGTCATCGAGAGGGTCAAGAAGCTGAGGAAGGAGATGCACGGCGCCGGCGCGTCGTCGCGACTCTCAACGGCATTAGGTGCAAACACCAATGGAGGTTTCCAATCGAGTTAGACCAGATGACAAAAATAGTTAAAAGGGATATGATAGTTAAGTTGGAGAGCAAAACATGGGATTTGAAGGAGTTTGATTTCATGTTTAAGAAAACGTAATTTGATTTCACCTCACCGTACGTAGGTGGCCGAATGCTGAAGCATGCGTGTCTCTATTGGTTGTGGGTAGGCTGAAATAAAATTTTGATC]
[+] EMBL AK122034 [AGCTCAGGAGGCTCCCGTCCGCACGCGACGTCACGACGACGACGGCGGCGGCGGTGGCTGGGGACGCGCACGCCTGCGAGGGGCGGTACGTGTACATCCACGACCTGCCGCCGCGGTTCAACGACGACATCCTCCGCAACTGCCGCGAGTGGTACCAGTGGATCAACATGTGCGTGTACCTCAGCAACGGCGGCCTCGGCGAGCCGGTGGACAACGCGGACGGCGCGTTCGCCGACGAGGGGTGGTACGCCTCGGACCACTTCGGCCTCGACGTCATCTTCCACAGCCGCATCAAGCAGTACGAGTGCCTCACCGACGACTCCTCCCGCGCCGCCGCCGTCTTCGTGCCGTTCTACGCCGGCTTCGACGTCGTGCAGCACCTGTGGGGCAGCAACGCGTCGGTCAAGGACGCCGCGTCGCTGGAGCTCGTCGACTGGCTCACGCGTCGCCCCGAGTGGCGCTCCATGGGCGGCCGCGACCACTTCGTGATGTCCGGGAGGACGGCGTGGGACCACCAGCGGCAGACGGACAGCGACTCGGAGTGGGGCAACAAGTTCCTCCGGCTGCCGGCCGTGCAGAACATGACGGTGCTCTTCGTCGAGAAGACGCCATGGACGGAGCACGACTTCGCCGTGCCGTACCCGACCTACTTCCACCCGGCGAAGGACGCCGAGATCTTCCAGTGGCAGCAGCGGATGCGCGGCATGAAGCGCGAGTGGCTCTTCACCTTCGCCGGCGGCACGCGCCCCGGTGACCCCAACTCCATCCGGCACCACCTCATCCGGCAATGCGGCGCGTCCAGCCTCTGCAACCTGATCCAGTGCCGGAAGGGCGAGAAGAAGTGCCTCATCCCGAGCACGTTCATGCGCGTGTTCCAGGGCACGCGCTTCTGCCTGCAGCCGCCGGGCGACACGTACACGCGGCGGTCGGCGTTCGACGCCATGCTCGCCGGCTGCGTGCCGGTGTTCTTCCACCCGGCGTCCGCGTACACGCAGTACAAGTGGCACCTCCCCGACGTGCACGAAACCTACTCGGTGTTCATCGCCGAGGAGGACATCCGCAGCGGCAACGTGAGCGTAGAGGAGACGCTCCGGAGGATCCCGCCGGACGTCGCGGAGAAGATGACGGAGACGGTGATCAGCCTCGTGCCGAGGCTGCTCTACGCGGACCCTAGGTCGAAGCTGGAGACGGTCAAGGACGCCGTGGATTTGACGGTGGAGGCGGTCATCGAGAGGGTCAAGAAGCTGAGGAAGGAGATGCACGGCGCCGGCGCGTCGTCGCGACTCTCAACGGCATTAGGTGCAAACACCAATGGAGGTTTCCAATCGAGTTAGACCAGATGACAAAAATAGTTAAAAGGGATATGATAGTTAAGTTGGAGAGCAAAACATGGGATTTGAAGGAGTTTGATTTCATGTTTAAGAAAACGTAATTTGATTTCACCTCACCGTACGTAGGTGGCCGAATGCTGAAGCATGCGTGTCTCTATTGGTTGTGGGTAGGCTGAAATAAAATTTTGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4256#0 ACTAGCTGAGCACTGAGCCAGTGAGCTCTG-CCACTCGTAGTAGTCGATCGCCGGCGATC 59
consensus_4256#1 ------------GTGAGCTACTGAGCAGTGACCACTAGTAGGTTCTACTCGTCGGCAACC 48
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 GATCTTGCCTCGCCGGAGAAGGAGAGAAGACGTCACGCCGGCGGCGGCA----------- 108
consensus_4256#1 GATCTTGCCTCGCCGGAGAAG-ACAACGCCCGCGGCGGCGGCGGCGGCGACGCTCTCCTT 107
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 ----------CATGAAGCGGCACAACACGGCGGAGGTGCCGGTGCCGGTGAGCTACGGCG 158
consensus_4256#1 TTGATGCTCTCATGAAGCGGCACAACGCGGCGGAGGTGCCGGTGCCGGTGAGCTACGGCG 167
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 GCAAGGTGGAGAAGACGAT--------GGGTGG-----------GGCTAAGCAGGGGCGC 199
consensus_4256#1 GCGAGCGGGATGAGAAGACCGGAAGCAAGGTGGATAAGATGGGTGGTGGAGCGGCTAGGC 227
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 GGCGGCGG--CGGCGGCTGCTGCTCCCGCCTCTGGTTCATGGTCGTTCTCTCCGCCACCG 257
consensus_4256#1 GGTGGCGGAGCGGCGGCTGCTGCTCCCGCCTCTGGCTCGTGCTCGTCGTGTTCGCCACCG 287
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 TGACGCTGCTGGTGCGCCACTGCTACGACTCCGGCGTGATCGGCCACGGCGCCGTCGCCG 317
consensus_4256#1 TCACGATGCTGCTGCGCCACCGCTACGACTCCGGCCT---CGGCCATGGTGCCGCCGCCG 344
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 GCGGCGTGGTGCGCATCGAGCCGGTGCACCGTGGTTTGTACCACACTCGGAAGGCGAGCC 377
consensus_4256#1 ------TGGTGCGCATCGAGCCGGTGCACCG------------------GAAGGTGAAGC 380
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 CGGTGGATCGCGGCGGCGGCGGCGGCGGCACGTCGTTCTCTGGCCATTCGCCGTCGCCGC 437
consensus_4256#1 CAGCCGATCGCGGCGGCGCCAG--GC----CGTCGTTCTCCG---ATTC----------- 420
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 CCGACGCCGGCGGCAGCGCGAAGCCGGAGTCTCCGCACGACAGCGGCGTCAAGGCGCCGT 497
consensus_4256#1 ----------CGGCAGCGCGAAGCCGG--------------------------------- 437
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 CGGAGCTGACCACCGTCGAGCACACCAAGCAGCCGTCCGAGCCAGCTTCTACCGGCACGG 557
consensus_4256#1 ---------TCACCGTCGACCACAAGTCGGCGACGACCGATTC---TTCTACCGGAACGG 485
consensus_4256#2 ------------------------------------------------------------
consensus_4256#0 AGTCGGATGATGGAGGCAAGCCATCGTCGGCGTCGTCATCCTCGCTGCCGGCGGCGGCGC 617
consensus_4256#1 AGTCTGACGGTGGAGGCGAGCCATCGTCGGCGT---CATCTTCGCTGCCGGCGGCGGCGC 542
consensus_4256#2 ----------------------------AGC-TCAGGAGGCTCCCGTCCGCACGCGACGT 31
** * * ** * *** *** **
consensus_4256#0 ACCCGTTCGCGCGCGCGCTCGCGGCGGCGGGCGACAAGGGCGACCGGTGCGGCGGGCGGT 677
consensus_4256#1 ACCCGTTCTCGCGCGCGCTCGCGGCGGCGGGCGACAAGGGCGACCGGTGCGGCGGGCGGT 602
consensus_4256#2 -CACGACGACGACGGCGGCGGCGGTGGCTGGGGACGCGCACGCC---TGCGAGGGGCGGT 87
* ** ** *** **** *** ** *** * ** * **** *******
consensus_4256#0 ACGTGTACGTGCAGGAGCTGCCACCGCGGTTCAACACCGACATGGTAAAGAACTGCGCGA 737
consensus_4256#1 ACGTGTACGTGCAGGAGCTGCCTCCGCGGTTCAACACCGACATGGTCAAGAACTGCGTGG 662
consensus_4256#2 ACGTGTACATCCACGACCTGCCGCCGCGGTTCAACGACGACATCCTCCGCAACTGCCGCG 147
******** * ** ** ***** ************ ****** * ******
consensus_4256#0 CGCTGTTCCCGTGGACGGACATGTGCGCGTTCACGGCGAACGGCGGCTTCGGCCCGCAGA 797
consensus_4256#1 CTCTGTTCCCGTGGAAAGACATGTGCAAGTTCACGGCGAACGGCGGCTTCGGCCCGCCGA 722
consensus_4256#2 AGTGGTACCAGTGGATCAACATGTGCGTGTACCTCAGCAACGGCGGCCTCGGCGAGCCGG 207
** ** ***** ******** ** * ********* ***** ** *
consensus_4256#0 TGAGCGGCGGCGACGGCGGCGTGTTCCAGGAGACCGGGTGGTACAACTCCGACCAGTACA 857
consensus_4256#1 TGAGCGGCGG---CGGCGGCATGTTCCAGGAGACCGGGTGGTACAACTCCGACAAGTACA 779
consensus_4256#2 TGGACAACGC---GGACGGCGCGTTCGCCGACGAGGGGTGGTACGCCTCGGACCACTTCG 264
** * ** * **** **** ** ********* *** *** * * *
consensus_4256#0 CGGTGGACATCATCTTCCACGACCGGATCAGGCGGTACGAGTGCCTCACCGACGACCCCT 917
consensus_4256#1 CGGTGGACATCATCTTCCACGAGCGGATGAGGCGGTACGAGTGCCTCACCGACGACCCCT 839
consensus_4256#2 GCCTCGACGTCATCTTCCACAGCCGCATCAAGCAGTACGAGTGCCTCACCGACGACTCCT 324
* *** *********** ** ** * ** ********************** ***
consensus_4256#0 CCCTCGCCGCCGCCGTGTACGTGCCGTTCTTCGCCGGCCTCGAGGTGGCGCGCCACCTCT 977
consensus_4256#1 CCCTGGCCGCCGCCGTGTACGTGCCGTTCTTCGCCGGCCTCGAGGTGTGGCGCCACCTCT 899
consensus_4256#2 CCCGCGCCGCCGCCGTCTTCGTGCCGTTCTACGCCGGCTTCGACGTCGTGCAGCACCTGT 384
*** *********** * *********** ******* **** ** ** ***** *
consensus_4256#0 GGGGGTTCAACGTCACCACCCGGGACGCCATGGCGCTGGAGGTGGTGGACATCATCACGT 1037
consensus_4256#1 GGGGGTTCAACGCCACCGCGCGGGACGCCATGGCGCTGGAGGTGGTGGACATCATCACGT 959
consensus_4256#2 GGGGCAGCAACGCGTCGGTCAAGGACGCCGCGTCGCTGGAGCTCGTCGACTGGCTCACGC 444
**** ***** * ******* * ******** * ** *** *****
consensus_4256#0 CGCGGTCCGAGTGGCGCGCCATGGGAGGCCGCGACCACTTCTTCACCGCCGGCCGCACCA 1097
consensus_4256#1 CGCGGCCCGAGTGGCGCGCCATGGGAGGCCGCGACCACTTCTTCACCGCCGGCCTCATCA 1019
consensus_4256#2 GTCGCCCCGAGTGGCGCTCCATGGGCGGCCGCGACCACTTCGTGATGTCCGGGAGGACGG 504
** *********** ******* *************** * * **** *
consensus_4256#0 CGTGGGACTTCCGGAGGCTGAACGACGGCGACGCCGGCTGGGGCAGCAAGCTGTTCAGCC 1157
consensus_4256#1 CGTGGGACTTCCGGAGGCTGGCCGACGGCGACGCCGGCTGGGGGAGCAAGCTGTTCAGCC 1079
consensus_4256#2 CGTGGGACCACCAGCGGCAGACGGACAGCGACTCGGAGTGGGGCAACAAGTTCCTCCGGC 564
******** ** * *** * *** ***** * * ***** * **** * ** * *
consensus_4256#0 TTCCGGCGATCAAGAACATGACGGCGCTCGTGGTGGAGGCGAGCCCGTGGCACCTCAACG 1217
consensus_4256#1 TTCCGGCGATAAAGAACATGACGGCGCTCGTGGTGGAGGCGAGCCCGTGGCACCTCAACG 1139
consensus_4256#2 TGCCGGCCGTGCAGAACATGACGGTGCTCTTCGTCGAGAAGACGCCATGGACGGAGCACG 624
* ***** * ************ **** * ** *** ** ** *** ***
consensus_4256#0 ACGCCGCCATCCCGTTCCCGACTGCGTTCCACCCGGCGAGCGACGAGGCCGTGTTCGTCT 1277
consensus_4256#1 ACGCCGCCATCCCGTTCCCGACGGCGTTCCACCCGGCGAGCGACGAGGCCGTGTTCGTCT 1199
consensus_4256#2 ACTTCGCCGTGCCGTACCCGACCTACTTCCACCCGGCGAAGGACGCCGAGATCTTCCAGT 684
** **** * **** ****** ************* **** * * *** *
consensus_4256#0 GGCAGGACAAGGTCCGCCGCCTCGAGCGCCCATGGCTCTTCTCCTTCGCCGGCGCGGCGC 1337
consensus_4256#1 GGCAGGACAAGGTCCGCCGCCTCGAGCGCCCATGGCTCTTCTCCTTCGCCGGCGCGGCGC 1259
consensus_4256#2 GGCAGCAGCGGATGCGCGGCATGAAGCGCGAGTGGCTCTTCACCTTCGCCGGCGGCACGC 744
***** * * * *** ** * ***** ********* ************ ***
consensus_4256#0 GCCCGGGCAGCGCCAAGTCCATCCGTTCCGAGCTCATCGCGCAGTGCAGGGCGTCGAGCG 1397
consensus_4256#1 GCCCGGGCAGCGCCAAGTCGATCCGTTCCGAGCTCATCACGCAGTGCAGGGCGTCGAGCG 1319
consensus_4256#2 GCCCCGGTGACCCCAACTCCATCCGGCACCACCTCATCCGGCAATGCGGCGCGTCCAGCC 804
**** ** * **** ** ***** * * ****** *** *** * ***** ***
consensus_4256#0 TGTGCTCCCTGATGGAGTGCGCCGACGGGCCGAGCAACAAGTGCGGCTCGCCGGCGAGCT 1457
consensus_4256#1 CGTGCTCACTCATGGAGTGCCGCGACGGGCCGAGCAACAAGTGCGGCTCGGCGGCGAGCT 1379
consensus_4256#2 TCTGCAACCTGATCCAGTGC--CGGAAGGGCGAG-AAGAAGTGCCTCATCCCGAGCACGT 861
*** ** ** ***** ** ** **** ** ****** * ** * *
consensus_4256#0 ACATGAGGCTGTTCCAGAGCTCCACCTTCTGCCTCCAGCCGCAGGGCGACTCGTACACGC 1517
consensus_4256#1 ACATGAGACTCTTCCAGAGCTCCACCTTCTGCCTCCAGCCGCAGGGCGACTCATACACGC 1439
consensus_4256#2 TCATGCGCGTGTTCCAGGGCACGCGCTTCTGCCTGCAGCCGCCGGGCGACACGTACACGC 921
**** * * ****** ** * ********* ******* ******* * *******
consensus_4256#0 GCAAGTCGGCGTTCGACGCCATGCTCGCCGGCTGCATCCCGGTGTTCTTCCACCCCGGCA 1577
consensus_4256#1 GCAAGTCGGCGTTCGACGCCATGCTCGCCGGCTGCATCCCGGTGTTCTTCCACCCCGGCA 1499
consensus_4256#2 GGCGGTCGGCGTTCGACGCCATGCTCGCCGGCTGCGTGCCGGTGTTCTTCCACCCGGCGT 981
* ******************************* * ***************** *
consensus_4256#0 CGGCGTACGTCCAGTACACCTGGCACCTGCCCAGGAACCACGCCGACTACTCCGTCTACA 1637
consensus_4256#1 CGGCGTACGTCCAGTACACCTGGCACCTGCCCAGGAACCACGCCGACTACTCCGTCTACA 1559
consensus_4256#2 CCGCGTACACGCAGTACAAGTGGCACCTCCCCGACGTGCACGAAACCTACTCGGTGTTCA 1041
* ****** ******* ******** *** **** ****** ** * **
consensus_4256#0 TCTCCGAGGACGACGTGCGCCGC---AACGCCAGCATCGAGGAGCGGCTGCGGCGGATCG 1694
consensus_4256#1 TCTCCGAGGACGACGTGCGCCGC---AACGCCAGCATCGAGGAGCGGCTGCGGCGGATCG 1616
consensus_4256#2 TCGCCGAGGAGGACATCCGCAGCGGCAACGTGAGCGTAGAGGAGACGCTCCGGAGGATCC 1101
** ******* *** * *** ** **** *** * ****** *** *** *****
consensus_4256#0 CGCCGGCCGCCGTGGAGCGGATGAGGGAGACGGTCATCTCGCTCATCCCGACGGTGGTGT 1754
consensus_4256#1 CGCCGGCCGCCGTGGAGCGGATGAGGGAGACGGTCATCTCGCTCATCCCGACGGTGGTGT 1676
consensus_4256#2 CGCCGGACGTCGCGGAGAAGATGACGGAGACGGTGATCAGCCTCGTGCCGAGGCTGCTCT 1161
****** ** ** **** ***** ********* *** *** * **** * ** * *
consensus_4256#0 ACGCGCAGCCGTCGTCGAGGCTGGACACGATGAAGGACGCGTTCGACGTGGCGGTGGACG 1814
consensus_4256#1 ACGCGCAGCCGTCGTCGAGGCTGGACACGATGAAGGACGCGTTCGACGTGGCGGTGGACG 1736
consensus_4256#2 ACGCGGACCCTAGGTCGAAGCTGGAGACGGTCAAGGACGCCGTGGATTTGACGGTGGAGG 1221
***** * ** ***** ****** *** * ******** * ** ** ******* *
consensus_4256#0 CCATCGTCGACAAGGTGACGAGGCTGCGGCGCGACATCGTCGACGGCCGCGGCGAGGAGG 1874
consensus_4256#1 CCATCGTCGACAAGGTGACGAGGCTGCGGCGCGACATCGTCGACGGCCGCGGCGAGGAGG 1796
consensus_4256#2 CGGTCATCGAGAGGGTCAAGAAGCTGAGGAAGGAGATGCACGGCGCCGGCG-CGTCGTCG 1280
* ** **** * *** * ** **** ** ** ** ** ** * *** ** * *
consensus_4256#0 AGAAGCTGGAGATGTACAGCTGGAAGTATCCATTG----CTGCGAGAAGGGCAGA--AGG 1928
consensus_4256#1 AGAAGCTGGAGATGTACAGCTGGAAGTATCCATTG----CTGCGAGAAGGGCAGA--AGG 1850
consensus_4256#2 CGACTCTCAACGGCATTAGGTGCAAACACCAATGGAGGTTTCCAATCGAGTTAGACCAGA 1340
** ** * ** ** ** * * ** * * * * * *** **
consensus_4256#0 TCGAGGACCCCCATGAGTGGGATCCATTGTTCGCGTTCGGT--TAGGTCATCGTTTCTAT 1986
consensus_4256#1 TCGAGGACCCCCATGAGTGGGATTCATTGTTCGCGTTCGCC--TAGCTCACCATTTCTAC 1908
consensus_4256#2 TGACAAAAATAGTTAAAAGGGATATGATAGTTAAGTTGGAGAGCAAAACATGGGATTTGA 1400
* * * * ***** * * *** * * ** * *
consensus_4256#0 TACTTTCTACTGTCACACTGTTACACAATACAAGGTTAATTACGTGTTTGAAAGAAGTTT 2046
consensus_4256#1 CAATT--AAATTTGACCTTCATGTTTGTGAAGTGATCTATCACAAATTAAA--------- 1957
consensus_4256#2 AGGAGTTTGATTTCATGTTTAAGAAAACGTAATTTGATTTCACCTCACCGTACGTAGGTG 1460
* * * * * **
consensus_4256#0 GGGAATACTTGTAATGCAATGGAACGAATAATTTCCAGTTTTACCAAAAGATG------- 2099
consensus_4256#1 ------------------------------------------------------------
consensus_4256#2 GCCGAATGCTGAAGCATGCGTGTCTCTATTGGTTGTGGGTAGGCTGAAATAAAATTTTGA 1520
consensus_4256#0 --
consensus_4256#1 --
consensus_4256#2 TC 1522
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||