cluster # 4270

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4270 cluster # 4270 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4270#0 length = 1476 sequences # 3
consensusID : consensus_4270#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1476
fasta sequence
                              [AGAAGCTCACCACTCGAGCTCTGTCTGAACTCTGAAGATGGAGGAGCACTACACCATGAAGAAGCCGAGGTTGCTTCTTCTTTCCTTGGAGGTGATACTGATTGCTCTTCTTCTTCCTCTCCGTGGTGCACATTGTGAGAGCTCTACTCAAGGTGAAGGCGGCGGTGGCGGCGCCGGCGCCGGCGCGGCGAACCTGACGGTGACCGGCACGGTGTTCTGCGACGCCTGCTCCTCCAGCTCCTTCTCCAACCACAGCTACTTCTTGCCAGGTGTCAAAGTGAGAATCGACTGCATGATCAGCGTGAAATCGGCGTCCAAGGAGGAGATCAAGATCACCGCCGAGAAGGTGACCAACACC-TTCGGCGCGTACCAGCTCGACATCCCGGCGATCGACGGC-TTCGAGTGCGCCACCTCCGCCGCCGCCGCCGCCGACTCCTTCTGCCGCGCCGCCGTCATCGACAACCCCTCGCCGCTCTGCAACGTGCCGGCGGTCACCACCACCGTCGGCCACATCTCCTCCTCCTCCTCCGGCCACGACCACGACCAGCCCAACGCCTGCCTCTACAACCTCAACTCCCTCTACTACCGCCCCGGCGGCGCCAAGAACGGCGGCCAGTGCGGCGGCACCGGCGGCGGAGGCGACGTGCCCCCCGCCGCGCTGAACACGTCGCTGTTCTACTGCCCGCCGTGGCCGTGGCCGCCGATCCCGTTCTGCACGCCGCGCCCGTGGTTCCCGCCCATCCCGTTCCTCACGCCGCCGCCGCCGCCGTTCCTCCCGTTCCCGCTCCCGCCGATCCCGTTCCTCACGCCGCCGTCGCCGCCGCCGCCGGCGTTCCCGTTCCCGCTCCCGCCATGGCCGTGGGCGCCGCCGCCGGCGTTCCCGTTCCCGCACCTCCCGCCAATCTTCTCGCCGCCGTCACCGCCCCCGCCGCCGCCACCGGCGTTCCCGTTCCCGTTCCCGCAGCTGCCGCCTCTCCCGCACTTCCCACCGCTGCCATCATTCTACCCATCGCCACCTCCGCCTCCGCCGCCGCCGCCGCCACCGCCGCCATCGTTCCCGTGGCCGTTCCCGCCATTGGCGCCGCTTTTCCCGCCATATCCATCTCCTCCACCGTCGATGTATTCTCGCAAAGATCCGAGCACTTGGTCGTCGTCTTCCAAACAGCAGCCATGAGTAAAAAATACATTTTGCTTGTGCTGGAAATTGTATTGTGTACTATGTATATGAGCTTTTTTTTATGGATTGTTTAGTGTAAGAGTGCATTTGGCTATTTGCACTCTGTATACAAATATTTGTAGATTTTAGGTTTAAAAGAATGAAGATTAGGTTAATCCTACTTTGTGACTATGAAAGGGTAAAATAATCGCGGCTTGTGCTCTCTCTGTCTTCGACTGTTTGGTAGTGTGGAAATTTGGCATACAGGTTAATATCAAACAGTGAGTCTCAACTTATGTTTTGAACTTTTTGTGGAAATA]

[+] EMBL AK063278             [AGAAGCTCACCACTCGAGCTCTGTCTGAACTCTGAAGATGGAGGAGCACTACACCATGAAGAAGCCGAGGTTGCTTCTTCTTTCCTTGGAGGTGATACTGATTGCTCTTCTTCTTCCTCTCCGTGGTGCACATTGTGAGAGCTCTACTCAAGGTGAAGGCGGCGGTGGCGGCGCCGGCGCCGGCGCGGCGAACCTGACGGTGACCGGCACGGTGTTCTGCGACGCCTGCTCCTCCAGCTCCTTCTCCAACCACAGCTACTTCTTGCCAGGTGTCAAAGTGAGAATCGACTGCATGATCAGCGTGAAATCGGCGTCCAAGGAGGAGATCAAGATCACCGCCGAGAAGGTGACCAACACC TTCGGCGCGTACCAGCTCGACATCCCGGCGATCGACGGC TTCGAGTGCGCCACCTCCGCCGCCGCCGCCGCCGACTCCTTCTGCCGCGCCGCCGTCATCGACAACCCCTCGCCGCTCTGCAACGTGCCGGCGGTCACCACCACCGTCGGCCACATCTCCTCCTCCTCCTCCGGCCACGACCACGACCAGCCCAACGCCTGCCTCTACAACCTCAACTCCCTCTACTACCGCCCCGGCGGCGCCAAGAACGGCGGCCAGTGCGGCGGCACCGGCGGCGGAGGCGACGTGCCCCCCGCCGCGCTGAACACGTCGCTGTTCTACTGCCCGCCGTGGCCGTGGCCGCCGATCCCGTTCTGCACGCCGCGCCCGTGGTTCCCGCCCATCCCGTTCCTCACGCCGCCGCCGCCGCCGTTCCTCCCGTTCCCGCTCCCGCCGATCCCGTTCCTCACGCCGCCGTCGCCGCCGCCGCCGGCGTTCCCGTTCCCGCTCCCGCCATGGCCGTGGGCGCCGCCGCCGGCGTTCCCGTTCCCGCACCTCCCGCCAATCTTCTCGCCGCCGTCACCGCCCCCGCCGCCGCCACCGGCGTTCCCGTTCCCGTTCCCGCAGCTGCCGCCTCTCCCGCACTTCCCACCGCTGCCATCATTCTACCCATCGCCACCTCCGCCTCCGCCGCCGCCGCCGCCACCGCCGCCATCGTTCCCGTGGCCGTTCCCGCCATTGGCGCCGCTTTTCCCGCCATATCCATCTCCTCCACCGTCGATGTATTCTCGCAAAGATCCGAGCACTTGGTCGTCGTCTTCCAAACAGCAGCCATGAGTAAAAAATACATTTTGCTTGTGCTGGAAATTGTATTGTGTACTATGTATATGAGCTTTTTTTTATGGATTGTTTAGTGTAAGAGTGCATTTGGCTATTTGCACTCTGTATACAAATATTTGTAGATTTTAGGTTTAAAAGAATGAAGATTAGGTTAATCCTACTTTGTGACTATGAAAGGGTAAAATAATCGCGGCTTGTGCTCTCTCTGTCTTCGACTGTTTGGTAGTGTGGAAATTTGGCATACAGGTTAATATCAAACAGTGAGTCTCAACTTATGTTTTGAACTTTTTGTGGAAATA]
[+] EMBL AU032414             [          CACTCGAGCTCTGTCTGAACTCTGAAGATGGAGGAGCACTACACCATGAAGAAGCCGAGGTTGCTTCTTCTTTCCTTGGAGGTGATACTGATTGCTCTTCTTCTTCCTCTCCGTGGTGCACATTGTGAGAGCTCTACTCAAGGTGAAGGCGGCGGTGGCGGCGCCGGCGCCGGCGCGGCGAACCTGACGGTGACCGGCAC GTGTTCTGCGACGCCTGCTCCTCCAGCTCCTTCTCCAACCACAGCTACTTCTTGCCAGGTGTCAAAGTGAGAATCGACTGCATGATCAGCGTGAAATCGGCGTCCAAGGAGGAGATCAAGATCACCGCCGAGAAGGTGACCAACACCTTTCGGCGCGTACCAGCTCGANATCCCGGCGATTGAAGGCTTTCGAGTGCGGCAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AB048726             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGCCATATCCATCTCCTCCACCGTCGATGTATTCTCGCAAAGATCCGAGCACTTGGTCGTCGTCTTCCAAACAGCAGCCATGAGTAAAAAATACATTTTGCTTGTGCTGGAAATTGTATTGTGTACTATGTATATGAGCTTTTTTTTATGGATTGTTTAGTGTAAGAGTGCATTTGGCTATTTGCACTCTGTATACAAATATTTGTAGATTTTAGGTTTAAAAGAATGAAGATTAGGTTAATCCTACTTTGTGACTATGAAAGGGTAAAATAATCGCGGCTTGTGCTCTCTCaa                                                                                           ]




>consensus_4270#0
AGAAGCTCACCACTCGAGCTCTGTCTGAACTCTGAAGATGGAGGAGCACTACACCATGAA
GAAGCCGAGGTTGCTTCTTCTTTCCTTGGAGGTGATACTGATTGCTCTTCTTCTTCCTCT
CCGTGGTGCACATTGTGAGAGCTCTACTCAAGGTGAAGGCGGCGGTGGCGGCGCCGGCGC
CGGCGCGGCGAACCTGACGGTGACCGGCACGGTGTTCTGCGACGCCTGCTCCTCCAGCTC
CTTCTCCAACCACAGCTACTTCTTGCCAGGTGTCAAAGTGAGAATCGACTGCATGATCAG
CGTGAAATCGGCGTCCAAGGAGGAGATCAAGATCACCGCCGAGAAGGTGACCAACACCTT
CGGCGCGTACCAGCTCGACATCCCGGCGATCGACGGCTTCGAGTGCGCCACCTCCGCCGC
CGCCGCCGCCGACTCCTTCTGCCGCGCCGCCGTCATCGACAACCCCTCGCCGCTCTGCAA
CGTGCCGGCGGTCACCACCACCGTCGGCCACATCTCCTCCTCCTCCTCCGGCCACGACCA
CGACCAGCCCAACGCCTGCCTCTACAACCTCAACTCCCTCTACTACCGCCCCGGCGGCGC
CAAGAACGGCGGCCAGTGCGGCGGCACCGGCGGCGGAGGCGACGTGCCCCCCGCCGCGCT
GAACACGTCGCTGTTCTACTGCCCGCCGTGGCCGTGGCCGCCGATCCCGTTCTGCACGCC
GCGCCCGTGGTTCCCGCCCATCCCGTTCCTCACGCCGCCGCCGCCGCCGTTCCTCCCGTT
CCCGCTCCCGCCGATCCCGTTCCTCACGCCGCCGTCGCCGCCGCCGCCGGCGTTCCCGTT
CCCGCTCCCGCCATGGCCGTGGGCGCCGCCGCCGGCGTTCCCGTTCCCGCACCTCCCGCC
AATCTTCTCGCCGCCGTCACCGCCCCCGCCGCCGCCACCGGCGTTCCCGTTCCCGTTCCC
GCAGCTGCCGCCTCTCCCGCACTTCCCACCGCTGCCATCATTCTACCCATCGCCACCTCC
GCCTCCGCCGCCGCCGCCGCCACCGCCGCCATCGTTCCCGTGGCCGTTCCCGCCATTGGC
GCCGCTTTTCCCGCCATATCCATCTCCTCCACCGTCGATGTATTCTCGCAAAGATCCGAG
CACTTGGTCGTCGTCTTCCAAACAGCAGCCATGAGTAAAAAATACATTTTGCTTGTGCTG
GAAATTGTATTGTGTACTATGTATATGAGCTTTTTTTTATGGATTGTTTAGTGTAAGAGT
GCATTTGGCTATTTGCACTCTGTATACAAATATTTGTAGATTTTAGGTTTAAAAGAATGA
AGATTAGGTTAATCCTACTTTGTGACTATGAAAGGGTAAAATAATCGCGGCTTGTGCTCT
CTCTGTCTTCGACTGTTTGGTAGTGTGGAAATTTGGCATACAGGTTAATATCAAACAGTG
AGTCTCAACTTATGTTTTGAACTTTTTGTGGAAATA
clustalw multiple alignements is not computed in this case