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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4278 cluster # 4278       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4278#0 length = 997 sequences # 3  

consensusID : consensus_4278#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 997
fasta sequence
                              [GGCTCCTGAAACTGGAGCACCTGCTTCAGATTGGCTCTCGGTAGCTGTGGGTCTAGACAAAGCAAAGGAAGATTCTGTAGTTACAGCAGAAGAACAAGATGCTCCAGCTGTAGCTGAGGAAAAGGAAGCTCCTTCAGCAACCTAAAACTCGCAAGACATGTATACATTCCCTAGCTGTCGTAGTTCTTTCTCACCTTTGTTTATCGGTTAATCGGTTTGATTTGCTTGTTAGTCTTTTGCAGTTCATATTTGCCCACTGCAATCTTTATTTTTTGTTCATGTTCTCTGATGATTGCCAGTTTTTTTTTTATCATGTGAAATGATTTAGTGCTGGAGACCCTACAGTTTGGATGTAACCACGTAGGGCAATGCATCTACTTGATGAAATACTTGCCTCCTGCCACCACCACTATTTTTTTTAGTGTGGTTTGTTCCAGTAAGGTGTTGTATTCAGCATTGGATGGATGAATATTGATTTTTTTCCCCATCTGGGGGATGGCCGACAAAGCATCATGACCTGATGTAACCTGATGCAATCCTAGCAATTTATAGTGTATCCCCTTACTCCAGCCAGGTGTGGGGGGCACATGTACTTGTTGAGGAAAGCTACTAATATTTCCCGGCCTCCTGTGGTCGGATAAGTTGTCAATGAGGAAATGATTATTGCCAGTCTGCCCGCTTGTTTATTCACGTGAAAAAGTCATGAATGGTGTTTATCTTTACGGCATAATATTATTATTGTAAATATGGCGACCACAATGATTTTCTTATAAATTATCGATATTTAGCAATATGTGTGGGGGTGGCGCATTCTCCATATTACGCTCTATTTGGACATTTCTTGCCTCCTTCCTCGTCCTTGTTAACTACGATGGTAATCTGGGAAAACACTGTGCTTATCTCTCGAATATTCTGTTTCNAATCCCTCTTTTCTCTACTGCGTGTAATTAAATAGGGGCATTTTCGTTGTTATATGCACACAATGTCGCATCATAAC]

[+] EMBL BE040178             [GGCTCCTGAAACTGGAGCACCTGCTTCAGATTGGCTCTCGGTAGCTGTGGGTCTAGACAAAGCAAAGGAAGATTCTGTAGTTACAGCAGAAGAACAAGATGCTCCAGCTGTAGCTGAGGAAAAGGAAGCTCCTTCAGCAACCTAAAACTCGCAAGACATGTATACATTCCCTAGCTGTCGTAGTTCTTTCTCACCTTTGTTTATCGGTTAATCGGTTTGATTTGCTTGTTAGTCTTTTGCAGTTCATATTTGCCCACTGCAATCTTTATTTTTTGTTCATGTTCTCTGATGATTGCCAGTTTTTTTTTTATCATGTGAAATGATTTAGTGCTGGAGACCCTACAGTTTGGATGTAACCACGTAGGGCAATGCATCTACTTGATGAAATACTTGCCTCCTGCCACCACCACTATTTTTTTTAGTGTGGTTTGTTCCAGTAAGGTGTTGTATTCAGCATTGGATGGATGAATATTGATTTTTTTCCCCATCTGGGGGATGGCCGACAAAGCATCATGACCTGATGTAACCTGATGCAATCCTAGCAATTTATAGTGTATCCCCTTACTCCAGCCAGGTGTGGGGGGCACATGTACTTGTTGAGGAAAGCTACTAATATTTCCCGGCCTCCTGTGGTCGGATAAGTTGTCAATGAGGAAATGATTATTGCCAGTCTGCCCGCTTGTTTATTCACGTGAAAAAGTCATGAATGGTGTTTATCTTTACGGCATAATATTATTATTGTAAATATGGCGACCACAATGATTTTCTTATAAATTATCGATATTTAGCAATATGTGTGGGGGTGGCGCATTCTCCATATTACGCTCTATTTGGACATTTCTTGCCTCCTTCCTCGTCCTTGTTAACTACGATGGTAATCTGGGAAAACACTGTGCTTATCTCTCGAATATTCTGTTTCNAATCCCTCTTTTCTCTACTGCGTGTAATTAAATAGGGGCATTTTCGTTGTTATATGCACACAATGTCGCATCATAAC]
[-] EMBL CF310005             [                                                                AAGGAAGATTCTGTAGTTACAGCAGAAGAACAAGATGCTCCAGCTGTAGCTGAGGAAAAGGAAGCTCCTCCAGCAACCTAAAACTCGCAAGACATGTATACATTCCCTAGCTGTCGTAGTTCTTTCTCACCTTTGTTTATCGGTTAATCGGTTTGATTTGCTTGTTAGTCTTTTGCAGTTCATATTTGCCCACTGCAATCTTTATTTTTTGTTCATGTTCTCTGATGATTGCCAGTTTTTTTTTTATCATGTGAAATGATTTAGTGCTGGAAACCCTACAGTTTGGATGTAACCACGTAGGGCAATGCATCTACTTGATGAAATACTTGCCTCCTGCCACCACCACTATTTTTTTTAGTGTGGTTTGTTCCAGTAAGGTGTTGTATTCAGCATTGGATGGATGAATATTGATTTTTTTCCCCATCTGGGAGATGGCCGACAAAGTATCATGACCTGATGTAAaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CA760124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCCGCTTGTTTATTCACGTGAAAAAGTCATGAATGGTGTTTATCTTTACGGCATAATATTATTATTGTAAATATGGCGACCACAATGATTTTCTTATAAATTATCGATATTTAGCAATATGTGTGGGGGTGGCGCATTCTCCATATTACGCTCTATTTGGACATTTCTTGCCTCCTTCCTCGTCCTTGTTAACTACGATGGTAATCTGGGAAAACACTGTGCTTATCTCTCGAATA                                                                                       ]


>consensus_4278#0 GGCTCCTGAAACTGGAGCACCTGCTTCAGATTGGCTCTCGGTAGCTGTGGGTCTAGACAA AGCAAAGGAAGATTCTGTAGTTACAGCAGAAGAACAAGATGCTCCAGCTGTAGCTGAGGA AAAGGAAGCTCCTTCAGCAACCTAAAACTCGCAAGACATGTATACATTCCCTAGCTGTCG TAGTTCTTTCTCACCTTTGTTTATCGGTTAATCGGTTTGATTTGCTTGTTAGTCTTTTGC AGTTCATATTTGCCCACTGCAATCTTTATTTTTTGTTCATGTTCTCTGATGATTGCCAGT TTTTTTTTTATCATGTGAAATGATTTAGTGCTGGAGACCCTACAGTTTGGATGTAACCAC GTAGGGCAATGCATCTACTTGATGAAATACTTGCCTCCTGCCACCACCACTATTTTTTTT AGTGTGGTTTGTTCCAGTAAGGTGTTGTATTCAGCATTGGATGGATGAATATTGATTTTT TTCCCCATCTGGGGGATGGCCGACAAAGCATCATGACCTGATGTAACCTGATGCAATCCT AGCAATTTATAGTGTATCCCCTTACTCCAGCCAGGTGTGGGGGGCACATGTACTTGTTGA GGAAAGCTACTAATATTTCCCGGCCTCCTGTGGTCGGATAAGTTGTCAATGAGGAAATGA TTATTGCCAGTCTGCCCGCTTGTTTATTCACGTGAAAAAGTCATGAATGGTGTTTATCTT TACGGCATAATATTATTATTGTAAATATGGCGACCACAATGATTTTCTTATAAATTATCG ATATTTAGCAATATGTGTGGGGGTGGCGCATTCTCCATATTACGCTCTATTTGGACATTT CTTGCCTCCTTCCTCGTCCTTGTTAACTACGATGGTAATCTGGGAAAACACTGTGCTTAT CTCTCGAATATTCTGTTTCNAATCCCTCTTTTCTCTACTGCGTGTAATTAAATAGGGGCA TTTTCGTTGTTATATGCACACAATGTCGCATCATAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)