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Oryza sativa
cluster # 428 cluster # 428       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_428#0 length = 1158 sequences # 2  

consensusID : consensus_428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1158
fasta sequence
                              [TCCCCATCCATCTTCTCCGCACACGCTACACTCCTCTCGATCGATCTTCTCCTCCCGTCTCGATCAGCTGATTCGCCCAGCCTCCGGTAGCTTGC-TTGTGCTTCGTATCCATGGATCCTCACCACAGCTCCCACGTCCATGCCGGAGCCGCCACTCCTAACTGCACGTGCAGGTTGCCCAAGGAGGAGGATCTAGCCGCCGCCGTCGTCGTCGTCGACGTCGAGGCGGCTCCTCACTACACGTCGTTGAAGGCGGCCGAGGCCGACGTCGTCCCGAGAGGAGTCGGCGGCGGCGGCGGCGGTGGCGAAGGGGACGGTGGCGAGGAGGTGAACTACATGGCCCGCGCGCAGTGGCTCCGCGCCGCGGTCCTCGGCGCCAACGACGGGCTCGTCTCCGTGGCGTCCCTCATGATCGGCATCGGCGCCGTGAACGAAAACAACAAGGCCATGCTCGTGTCCGGGCTGGCCGGGCTCGTGGCCGGCGCGTGCAGCATGGCCATCGGCGAGTTCGTGTCCGTGTACGCGCAGTACGACATCGAGGTGACGCAGATCGAGCGCGACGGCGACATCGACGGCGCCGATGCCGCGGCCGCGAGGGAGAAACTGCCGAGCCCGACGCAGGCCGCGTTCGCGTCGGCGCTGGCGTTCGCGATCGGCGGCCTCCTGCCGTTGCTGACGAGCGGGTTCATCAAGCCGTGGGGCCCCAGGGTCGGCGTCGTGTGCGCCGCGAGCAGCGTCGGGCTGGCCGGCTTCGGCGCCGCGGGCGGGTACCTCGGCGGCGCCAACATGGTGAGGTCCGGCACTAGGGTCCTCCTCGGCGGCTGGCTCGCCATGCTCATCACCTACGCCGTGCTCCGGCTGTTCGCGACGATCTTTCACGGCATGAACATCTCGTCGTCGGCGTGATGATGCGTGTGACGCAGAAATCGATCTATCTGGAGATGAAAAAGAAAATAATCAAGGGGTTGTGCTAGCTAGCTGTTTAATTAACTACTCTTGGTTTGCCAGTAGTACTGTACCTAGTGGCTGATTATTAACTAGCGAATCCCTGGATACCGAACTGGGAATAATCAGGGGGTGTAAGTGTAATGGTTGTTGTGAATTTGTGATGAGGCAAGACCAGGCAAATGGTCTCAAATGAGAATATTGGTGTTAATTA]

[+] EMBL AK108230             [TCCCCATCCATCTTCTCCGCACACGCTACACTCCTCTCGATCGATCTTCTCCTCCCGTCTCGATCAGCTGATTCGCCCAGCCTCCGGTAGCTTGC TTGTGCTTCGTATCCATGGATCCTCACCACAGCTCCCACGTCCATGCCGGAGCCGCCACTCCTAACTGCACGTGCAGGTTGCCCAAGGAGGAGGATCTAGCCGCCGCCGTCGTCGTCGTCGACGTCGAGGCGGCTCCTCACTACACGTCGTTGAAGGCGGCCGAGGCCGACGTCGTCCCGAGAGGAGTCGGCGGCGGCGGCGGCGGTGGCGAAGGGGACGGTGGCGAGGAGGTGAACTACATGGCCCGCGCGCAGTGGCTCCGCGCCGCGGTCCTCGGCGCCAACGACGGGCTCGTCTCCGTGGCGTCCCTCATGATCGGCATCGGCGCCGTGAACGAAAACAACAAGGCCATGCTCGTGTCCGGGCTGGCCGGGCTCGTGGCCGGCGCGTGCAGCATGGCCATCGGCGAGTTCGTGTCCGTGTACGCGCAGTACGACATCGAGGTGACGCAGATCGAGCGCGACGGCGACATCGACGGCGCCGATGCCGCGGCCGCGAGGGAGAAACTGCCGAGCCCGACGCAGGCCGCGTTCGCGTCGGCGCTGGCGTTCGCGATCGGCGGCCTCCTGCCGTTGCTGACGAGCGGGTTCATCAAGCCGTGGGGCCCCAGGGTCGGCGTCGTGTGCGCCGCGAGCAGCGTCGGGCTGGCCGGCTTCGGCGCCGCGGGCGGGTACCTCGGCGGCGCCAACATGGTGAGGTCCGGCACTAGGGTCCTCCTCGGCGGCTGGCTCGCCATGCTCATCACCTACGCCGTGCTCCGGCTGTTCGCGACGATCTTTCACGGCATGAACATCTCGTCGTCGGCGTGATGATGCGTGTGACGCAGAAATCGATCTATCTGGAGATGAAAAAGAAAATAATCAAGGGGTTGTGCTAGCTAGCTGTTTAATTAACTACTCTTGGTTTGCCAGTAGTACTGTACCTAGTGGCTGATTATTAACTAGCGAATCCCTGGATACCGAACTGGGAATAATCAGGGGGTGTAAGTGTAATGGTTGTTGTGAATTTGTGATGAGGCAAGACCAGGCAAATGGTCTCAAATGAGAATATTGGTGTTAATTA]
[+] EMBL BI799065             [                                   CTCGATCGATCTTCTCCTCCCGTCTCGATCA CTGATTCGCCCAGCCTCCGGTAGCTTGCATTGTGCTTCGTATCCATGGATCCTCACCACAGCTCCCACGTCCATGCCGGAGCC CCACTCCTAACTGCACGTGCAGGTTGCCCAAGGAGGAGGATCTA CCGCCGCCGTCGTCGTCGTCGACGTCGAGGCGGCTCCTCACTACACGTCGTTGAAGGCGGCCGAGGCCGACGTCGTCCCGAGAGGAGTCGGCGGCGGCGGCGGCGGTGGCGAAGGGGACGGTGGCGAGGAGGTGAACTACATGGCCCGCGCGCAGTGGCTCCGCGCCGCGGTCCTCGGCGCCAACGACGGGCTCGTCTCCGTGGCGTCCCTCATGATCGGCATCGGCGCCGTGAACGAAAACAACAAGGCCATGCTCGTGTCCGGGCTGGCCGGGCTCGTGGCCGGCGCGTGCAGCATGGCCATCGGCGAGTTCGTGTCCGTGTACGCGCAGTACGACATCGAGGTGACGCAGATCGAGCGCGACGGCGACATCGACGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_428#0 TCCCCATCCATCTTCTCCGCACACGCTACACTCCTCTCGATCGATCTTCTCCTCCCGTCT CGATCAGCTGATTCGCCCAGCCTCCGGTAGCTTGCTTGTGCTTCGTATCCATGGATCCTC ACCACAGCTCCCACGTCCATGCCGGAGCCGCCACTCCTAACTGCACGTGCAGGTTGCCCA AGGAGGAGGATCTAGCCGCCGCCGTCGTCGTCGTCGACGTCGAGGCGGCTCCTCACTACA CGTCGTTGAAGGCGGCCGAGGCCGACGTCGTCCCGAGAGGAGTCGGCGGCGGCGGCGGCG GTGGCGAAGGGGACGGTGGCGAGGAGGTGAACTACATGGCCCGCGCGCAGTGGCTCCGCG CCGCGGTCCTCGGCGCCAACGACGGGCTCGTCTCCGTGGCGTCCCTCATGATCGGCATCG GCGCCGTGAACGAAAACAACAAGGCCATGCTCGTGTCCGGGCTGGCCGGGCTCGTGGCCG GCGCGTGCAGCATGGCCATCGGCGAGTTCGTGTCCGTGTACGCGCAGTACGACATCGAGG TGACGCAGATCGAGCGCGACGGCGACATCGACGGCGCCGATGCCGCGGCCGCGAGGGAGA AACTGCCGAGCCCGACGCAGGCCGCGTTCGCGTCGGCGCTGGCGTTCGCGATCGGCGGCC TCCTGCCGTTGCTGACGAGCGGGTTCATCAAGCCGTGGGGCCCCAGGGTCGGCGTCGTGT GCGCCGCGAGCAGCGTCGGGCTGGCCGGCTTCGGCGCCGCGGGCGGGTACCTCGGCGGCG CCAACATGGTGAGGTCCGGCACTAGGGTCCTCCTCGGCGGCTGGCTCGCCATGCTCATCA CCTACGCCGTGCTCCGGCTGTTCGCGACGATCTTTCACGGCATGAACATCTCGTCGTCGG CGTGATGATGCGTGTGACGCAGAAATCGATCTATCTGGAGATGAAAAAGAAAATAATCAA GGGGTTGTGCTAGCTAGCTGTTTAATTAACTACTCTTGGTTTGCCAGTAGTACTGTACCT AGTGGCTGATTATTAACTAGCGAATCCCTGGATACCGAACTGGGAATAATCAGGGGGTGT AAGTGTAATGGTTGTTGTGAATTTGTGATGAGGCAAGACCAGGCAAATGGTCTCAAATGA GAATATTGGTGTTAATTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)