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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4282 cluster # 4282       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4282#0 length = 855 sequences # 3  

consensusID : consensus_4282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 855
fasta sequence
                              [CGGCCNGCATCGCATCGCTAGCCATGTACGGCGGGTTCGGCAGAGGGGGGCAAGGGTGGAGCCCGTTCGACGCGATCCGCGGCTTCCCGTCGACGCCCGAGGCCCTCATGTCCCAGATCGACGCCGCCATCGCCGCCACCGAGTACGCCCGCTCCTGCGCGCAACTCGACCCCGCCACCGNCTCCTCGGAGCCGCAGCAGGCGGCACCGCCGCCC-GGGGGCGAGGCGCGTGTGGAAGGGGAGGCCTCCGCCGCCGCCGCCTGCTACGACGCGAAGGTCGCGGACGAGGCGTACCGCGCGGCGTGCGCGGCGCTCGGGGCCGGGAGGGCGGACGCGGCCGTGCGGTCGCTGCGGGTGGCGCTGGCGAGCTGCCCGCCGGAGAAGGCGGCTGCCGTGGCGAAGGTGCGGTCCATGCTGGCCATCGCGTCCGCGCAGCTGCACAAGCAGCAGCATCAGGCGCAGCAGCAGCTGCAACGCGGCGTCAGGAAGTGAGAAGCATCACCGGCGTCATTGCAGGATTAGCCCTTTCCGTTCGGATTAACCTTGATTGAGTTTGTGATTATTAATCAGCTACATCTAGTGGCGTTTAATTAGTGTTGAAAATTTGTTACTAGAAGCACCATGATTTGTGGCATTTATCATATTCACTATCACAAGATGTCAGATGATCGTCTATTCTTGGTTCTTGGCTTCTTGCTGCCTTTCGGTTACATACTTCGACTCTTCATCAAGAGTGACCAATGGCAGATTGTAGCTTTGTAAGATGAAACTTGACACAGCAGAGTGATTTAACGCAGGTAATGCGCGAATTGTGCGATTCGTGCCTACGTGCACCCAATCAGTGAATCTGGAGCAA]

[+] EMBL C73819               [CGGCCNGCATCGCATCGCTAGCCATGTACGGCGGGTTCGGCAGAGGGGGGCAAGGGTGGAGCCCGTTCGACGCGATCCGCGGCTTCCCGTCGACGCCCGAGGCCCTCATGTCCCAGATCGACGCCGCCATCGCCGCCACCGAGTACGCCCGCTCCTGCGCGCAACTCGACCCCGCCACCGNCTCCTCGGAGCCGCAGCAGGCGGCACCG CGCCCGGGGGGCGAGGCGCGTGTGGAAGGGGAGGCCTTCGCCGCCGCCGCCTGCTACGACGCGAAGGTCGCGGACGAGGCGTACCGCGCGGCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK107813             [                                GGGTTCGGCAGAGGGGGGCAAGGGTGGAGCCCGTTCGACGCGATCCGCGGCTTCCCGTCGACGCCCGAGGCCCTCATGTCCCAGATCGACGCCGCCATCGCCGCCACCGAGTACGCCCGCTCCTGCGCGCAACTCGACCCCGCCACCGCCTCCTCGGAGCCGCAGCAGGCGGCACCGCCGCCC GGGGGCGAGGCGCGTGTGGAAGGGGAGGCCTCCGCCGCCGCCGCCTGCTACGACGCGAAGGTCGCGGACGAGGCGTACCGCGCGGCGTGCGCGGCGCTCGGGGCCGGGAGGGCGGACGCGGCCGTGCGGTCGCTGCGGGTGGCGCTGGCGAGCTGCCCGCCGGAGAAGGCGGCTGCCGTGGCGAAGGTGCGGTCCATGCTGGCCATCGCGTCCGCGCAGCTGCACAAGCAGCAGCATCAGGCGCAGCAGCAGCTGCAACGCGGCGTCAGGAAGTGAGAAGCATCACCGGCGTCATTGCAGGATTAGCCCTTTCCGTTCGGATTAACCTTGATTGAGTTTGTGATTATTAATCAGCTACATCTAGTGGCGTTTAATTAGTGTTGAAAATTTGTTACTAGAAGCACCATGATTTGTGGCATTTATCATATTCACTATCACAAGATGTCAGATGATCGTCTATTCTTGGTTCTTGGCTTCTTGCTGCCTTTCGGTTACATACTTCGACTCTTCATCAAGAGTGACCAATGGCAGATTGTAGCTTTGTAAGATGAAACTTGACACAGCAGAGTGATTTAACGCAGGTAATGCGCGAATTGTGCGATTCGTGCCTACGTGCACCCAATCAGTGAATCTGGAGCAA]
[+] EMBL AU101376             [                                                                                                                                                                                                         CGGCACCGCCGCCC GGGGGCGAGGCGCGTGTGGAAGGGGAGGCCTCCGCCGCCGCCGCCTGCTACGACGCGAAGGTCGCGGACGAGGCGTACCGCGCGGCGTGCGCGGCGCTCGGGGCCGGGAGGGCGGACGCGGCCGTGCGGTCGCTGCGGGTGGCGCTGGCGAGCTGCCCGCCGGAGAAGGCGGCTGCCGTGGCGAAGGTGCGGTCCATGCTGGCCATCGCGTCCGCGCAGCTGCACAAGCAGCAGCATCAGGCGCAGCAGCAGCTGCAACGCGGCGTCAGGAAGTGAGAAGCATCACCGGCGTCATTGCAGGATTAGCCCTTTCCGTTCGGATTAACCTTGATTGAGTTTGTGATTATTAATCAGCTACATCTAGTGGCGTTTAATTAGTGTTGAAAATTTGTTACTAGAAGCACCATGATTTGTGGCATTTATCATATTCACTATCACAAGAaa                                                                                                                                                                                                    ]


>consensus_4282#0 CGGCCNGCATCGCATCGCTAGCCATGTACGGCGGGTTCGGCAGAGGGGGGCAAGGGTGGA GCCCGTTCGACGCGATCCGCGGCTTCCCGTCGACGCCCGAGGCCCTCATGTCCCAGATCG ACGCCGCCATCGCCGCCACCGAGTACGCCCGCTCCTGCGCGCAACTCGACCCCGCCACCG NCTCCTCGGAGCCGCAGCAGGCGGCACCGCCGCCCGGGGGCGAGGCGCGTGTGGAAGGGG AGGCCTCCGCCGCCGCCGCCTGCTACGACGCGAAGGTCGCGGACGAGGCGTACCGCGCGG CGTGCGCGGCGCTCGGGGCCGGGAGGGCGGACGCGGCCGTGCGGTCGCTGCGGGTGGCGC TGGCGAGCTGCCCGCCGGAGAAGGCGGCTGCCGTGGCGAAGGTGCGGTCCATGCTGGCCA TCGCGTCCGCGCAGCTGCACAAGCAGCAGCATCAGGCGCAGCAGCAGCTGCAACGCGGCG TCAGGAAGTGAGAAGCATCACCGGCGTCATTGCAGGATTAGCCCTTTCCGTTCGGATTAA CCTTGATTGAGTTTGTGATTATTAATCAGCTACATCTAGTGGCGTTTAATTAGTGTTGAA AATTTGTTACTAGAAGCACCATGATTTGTGGCATTTATCATATTCACTATCACAAGATGT CAGATGATCGTCTATTCTTGGTTCTTGGCTTCTTGCTGCCTTTCGGTTACATACTTCGAC TCTTCATCAAGAGTGACCAATGGCAGATTGTAGCTTTGTAAGATGAAACTTGACACAGCA GAGTGATTTAACGCAGGTAATGCGCGAATTGTGCGATTCGTGCCTACGTGCACCCAATCA GTGAATCTGGAGCAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)