cluster # 4285

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Oryza sativa
cluster # 4285 cluster # 4285 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4285#0 length = 588 sequences # 3

consensusID : consensus_4285#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 588
fasta sequence

                              [TTTTTTTTTTGTTCTTTAAACTGAAAAGAATCAAATAAATCATCTCAATTCATACAAAGAAAAAAAAAAAGAAGAGTAAGTACATGGCCGCCGCCACAGAGAAATGGCGCGAAACCACACCCTCCCTCCCTCCCTCACACCACCGCCGACTCATTAATTACATNCACAAATCCCCCCCACGCGACGACCACNCGACGACGGAGACACGCACACGACGACGACGAAAACGGATCANCCCGAGGCAGATCGAAGGGGATCGATCTNGCAGAAAGAGGTATCCGAACNCCGCGGCGGCGAAGGAGGCGGNCGCGAAGGGCACCGCGGGGGCGGCGTCCGATATGGGCGCCGGCGCCNGCGCGANGGCGGCTGCNGCNGATCCACGANGGACCCGGNGATGCGGCNACCCNAACCCTTCNTCCTGAGACNGGCNTTGTTTCCGAACCCGAANAAGNTTAGGATTNCACTTCTTATCTTTTGGCAAAACAAANNATGGGGTCTGCNAATTCCTGACCGGGGATCNTATTTTAAAGGGCGCNCCGGTGATNNCCCTTTTTCCTATANGTATTCAANTGGTTNNTGCTNCNNTCC]

[+] EMBL AA753305             [TTTTTTTTTTGTTCTTTAAACTGAAAAGAATCAAATAAATCATCTCAATTCATACAAAGAAAAAAAAAAAGAAGAGTAAGTACATGGCCGCCGCCACAGAGAAATGGCGCGAAACCACACCCTCCCTCCCTCCCTCACACCACCGCCGACTCATTAATTACATNCACAAATCCCCCCCACGCGACGACCACNCGACGACGGAGACACGCACACGACGACGACGAAAACGGATCANCCCGAGGCAGATCGAAGGGGATCGATCTNGCAGAAAGAGGTATCCGAACNCCGCGGCGGCGAAGGAGGCGGNCGCGAAGGGCACCGCGGGGGCGGCGTCCGATATGGGCGCCGGCGCCNGCGCGANGGCGGCTGCNGCNGATCCACGANGGACCCGGNGATGCGGCNACCCNAACCCTTCNTCCTGAGACNGGCNTTGTTTCCGAACCCGAANAAGNTTAGGATTNCACTTCTTATCTTTTGGCAAAACAAANNATGGGGTCTGCNAATTCCTGACCGGGGATCNTATTTTAAAGGGCGCNCCGGTGATNNCCCTTTTTCCTATANGTATTCAANTGGTTNNTGCTNCNNTCC]
[-] EMBL CB683762             [                           GAATCAAATAAATCATCTCAATTCATACAAATAAAAAAAAAAAGAAGAGTAAGTACATGGCCGCCGCCACAGAGAAATGGCGCGAAACCACA    CCCTCCCTCCCTCACACCACCGCCGACTCATTAATTACATACACAAATCCCCCCCA                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB238480             [                                      ATCATCTCAATTCATACAAAG AAAAAAAAAAGAAGAGTGAGTACATGGCCGCCGCCACAGAGAAATGGCGCGAAACCATACCCTCCCTCCCTCCCTCACACCACCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_4285#0
TTTTTTTTTTGTTCTTTAAACTGAAAAGAATCAAATAAATCATCTCAATTCATACAAAGA
AAAAAAAAAAGAAGAGTAAGTACATGGCCGCCGCCACAGAGAAATGGCGCGAAACCACAC
CCTCCCTCCCTCCCTCACACCACCGCCGACTCATTAATTACATNCACAAATCCCCCCCAC
GCGACGACCACNCGACGACGGAGACACGCACACGACGACGACGAAAACGGATCANCCCGA
GGCAGATCGAAGGGGATCGATCTNGCAGAAAGAGGTATCCGAACNCCGCGGCGGCGAAGG
AGGCGGNCGCGAAGGGCACCGCGGGGGCGGCGTCCGATATGGGCGCCGGCGCCNGCGCGA
NGGCGGCTGCNGCNGATCCACGANGGACCCGGNGATGCGGCNACCCNAACCCTTCNTCCT
GAGACNGGCNTTGTTTCCGAACCCGAANAAGNTTAGGATTNCACTTCTTATCTTTTGGCA
AAACAAANNATGGGGTCTGCNAATTCCTGACCGGGGATCNTATTTTAAAGGGCGCNCCGG
TGATNNCCCTTTTTCCTATANGTATTCAANTGGTTNNTGCTNCNNTCC

clustalw multiple alignements is not computed in this case