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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4306 cluster # 4306       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4306#0 length = 960 sequences # 2  

consensusID : consensus_4306#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 960
fasta sequence
                              [AACTAATCAACAACGATAATAATATCCCATTCCTTCCTTCCAATTTGAGATTAGATTAGCGGAGGAAGGAATGGCCGTGACGGCGGAGATGGAGTCGTCGCCGGCGGCGACGGGGAAGCTGCGGTACAACTCGCCGCTGGTGCAGGTGTCCCTGATCGGGTTGGTGTGCTTCTGCTGCCCTGGCATGTTCAACGCCCTGACCGGGCTCGGCGGCGGCGGGCAGCTGGACCACTCCACCGCCGACAACGCCAACACCGCCCTCTACTCCTGCTTCGCCGTCTTCGGCGTCCTCGGCGGCGCCGCCCACAACCTCCTCGGCCCGCGCGTCACCCTCCTCGCCGGCGCCCTCACCTACCCGCTCTACGCCGCCTCCTTCCTCTACTACAACCACCACCCCTCCCGCCAGGCCTTCCCCGTCACCGCCGGCGCCCTCCTCGGCGTCGGGGCCGGACTCCTCTGGGCCGCGCAGGGCGCCATCATGACGTCATACCCACCCCCGTCCCGCCGCGGCTCCTACATCTCCCTCTTCTGGTGCCTCTTCAACCTCGGCGGCGTCCTCGGTGGCCTCCTCCCCTTCTCCCTCAACTACCACCGCGCCGCCGACGCCGCCAGCGTCAACGACGCCACCTACATCGCTTTCATGGCGTTCATGCTCCTCGGCGCGGGCCTCGCCCTCCTCCTCCTGCCGGCCTCCAGGATCGTCCGCGACGACGGCAGCCGCGCCACCAGGATGAGCTACTCCTCCGTGTCCACCGAGGGGTGGGAGATCCTCAAGCTGTTCGCCAACTGGAGGATGCTGCTCGTCCTCCCCGCCGCATGGGCCAGCAACTTCTTCTACACCTACCAGTTCAACAACGTCAATGGCCGCCTCTTCACGCTCCGCACCAAGGGCCTCAACAACGTCTTCTACTGGGGCGCCCAGATGCTCGGCTCCGCGGCCATCGGCTACTTCCTCGACTT]

[+] EMBL AK101964             [AACTAATCAACAACGATAATAATATCCCATTCCTTCCTTCCAATTTGAGATTAGATTAGCGGAGGAAGGAATGGCCGTGACGGCGGAGATGGAGTCGTCGCCGGCGGCGACGGGGAAGCTGCGGTACAACTCGCCGCTGGTGCAGGTGTCCCTGATCGGGTTGGTGTGCTTCTGCTGCCCTGGCATGTTCAACGCCCTGACCGGGCTCGGCGGCGGCGGGCAGCTGGACCACTCCACCGCCGACAACGCCAACACCGCCCTCTACTCCTGCTTCGCCGTCTTCGGCGTCCTCGGCGGCGCCGCCCACAACCTCCTCGGCCCGCGCGTCACCCTCCTCGCCGGCGCCCTCACCTACCCGCTCTACGCCGCCTCCTTCCTCTACTACAACCACCACCCCTCCCGCCAGGCCTTCCCCGTCACCGCCGGCGCCCTCCTCGGCGTCGGGGCCGGACTCCTCTGGGCCGCGCAGGGCGCCATCATGACGTCATACCCACCCCCGTCCCGCCGCGGCTCCTACATCTCCCTCTTCTGGTGCCTCTTCAACCTCGGCGGCGTCCTCGGTGGCCTCCTCCCCTTCTCCCTCAACTACCACCGCGCCGCCGACGCCGCCAGCGTCAACGACGCCACCTACATCGCTTTCATGGCGTTCATGCTCCTCGGCGCGGGCCTCGCCCTCCTCCTCCTGCCGGCCTCCAGGATCGTCCGCGACGACGGCAGCCGCGCCACCAGGATGAGCTACTCCTCCGTGTCCACCGAGGGGTGGGAGATCCTCAAGCTGTTCGCCAACTGGAGGATGCTGCTCGTCCTCCCCGCCGCATGGGCCAGCAACTTCTTCTACACCTACCAGTTCAACAACGTCAATGGCCGCCTCTTCACGCTCCGCACCAAGGGCCTCAACAACGTCTTCTACTGGGGCGCCCAGATGCTCGGCTCCGCGGCCATCGGCTACTTCCTCGACTT]
[+] EMBL OSS4663A             [                     ATATCCCATTCCTTCCTTCCAATTTGAGATTAGATTAGCGGAGGAAGGAATGGCCGTGACGGCGGAGGTGGAGTCGTCGCCGGCGG GAAGNGNAAGCTGCGGTACAACTCGCCGCTGGTGCAGGTGTCCCTGATCGGGTTGGTGTGCTTCTGCTGCCCTGGCATGTTCAACGCCCTGACCGGGCTCGGCGGCGGCGGGCAGCTGGACCACTCCACCGNCGACAACGGCAACACCGNCCTCTACTCCTGCTTCGCCGTCTTC GCGTCCTCGGCGGCG CGGCCACAACCTCCTCGGCCCGCGCGTCAACCTCCTCGCCGGNGGCCTCAACTACCCGGTCTACGGCGGCTCCTTCCTCTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_4306#0 AACTAATCAACAACGATAATAATATCCCATTCCTTCCTTCCAATTTGAGATTAGATTAGC GGAGGAAGGAATGGCCGTGACGGCGGAGATGGAGTCGTCGCCGGCGGCGACGGGGAAGCT GCGGTACAACTCGCCGCTGGTGCAGGTGTCCCTGATCGGGTTGGTGTGCTTCTGCTGCCC TGGCATGTTCAACGCCCTGACCGGGCTCGGCGGCGGCGGGCAGCTGGACCACTCCACCGC CGACAACGCCAACACCGCCCTCTACTCCTGCTTCGCCGTCTTCGGCGTCCTCGGCGGCGC CGCCCACAACCTCCTCGGCCCGCGCGTCACCCTCCTCGCCGGCGCCCTCACCTACCCGCT CTACGCCGCCTCCTTCCTCTACTACAACCACCACCCCTCCCGCCAGGCCTTCCCCGTCAC CGCCGGCGCCCTCCTCGGCGTCGGGGCCGGACTCCTCTGGGCCGCGCAGGGCGCCATCAT GACGTCATACCCACCCCCGTCCCGCCGCGGCTCCTACATCTCCCTCTTCTGGTGCCTCTT CAACCTCGGCGGCGTCCTCGGTGGCCTCCTCCCCTTCTCCCTCAACTACCACCGCGCCGC CGACGCCGCCAGCGTCAACGACGCCACCTACATCGCTTTCATGGCGTTCATGCTCCTCGG CGCGGGCCTCGCCCTCCTCCTCCTGCCGGCCTCCAGGATCGTCCGCGACGACGGCAGCCG CGCCACCAGGATGAGCTACTCCTCCGTGTCCACCGAGGGGTGGGAGATCCTCAAGCTGTT CGCCAACTGGAGGATGCTGCTCGTCCTCCCCGCCGCATGGGCCAGCAACTTCTTCTACAC CTACCAGTTCAACAACGTCAATGGCCGCCTCTTCACGCTCCGCACCAAGGGCCTCAACAA CGTCTTCTACTGGGGCGCCCAGATGCTCGGCTCCGCGGCCATCGGCTACTTCCTCGACTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)