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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4311#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2698 fasta sequence
[ATTGGTAAGAGACTAAGAGAGTGAGCTTGCCGGAGATGTCGCGGTTTGTCGACAAGCTGCCGCTGTTCGACCGGAGGCCGTCGCCGATGGAGGAGGCCGAGGGCCTCCCGCGCAGTGGCTATCTTGGGCAGCTGCACCACCACCAGTACTACCAGCCGCACAGCAACATGCTGCCGCTGGAGCAGTCGCCGCCGACGAGCACGAAGCACACGTCGGTCACGCTCGCGCAGCTCCTGAAGCGCGTGAACGACGCGCGCAGCGGGTCGTCGACGCCCATCTCGTCGCCGCGCTACACCATCGAGCTGGGCGGGTCCAAGCCGGAGTCCGTCAGCAGCGAGAGCGACGACCACCACTCCGACGACGGCGGCAGCGAGGGGCAGCCGAGGGCGCTCGTGCTCAAGTTCACCGACCTGACGTACAGCGTGAAGCAGCGGAGGAAGGGGTCGTGCCTGCCGTTCCGTCGTGCGGCGGCGGACGAGCCCGAGCTGCCCGCGATGAGGACGCTGCTCGACGGCATCTCCGGCGAGGCCCGGGACGGCGAGATCATGGCGGTGCTCGGCGCGAGCGGGTCCGGCAAGAGCACGCTCATCGACGCGCTCGCCAACCGCATCGCCAAGGAGAGCCTCCACGGCTCCGTCACGATCAACGGCGAGTCCATCGACAGCAACCTGCTCAAGGTCATCTCAGCGTACGTCCGGCAGGAGGACCTTCTGTACCCGATGCTCACCGTCGAGGAGACGCTCATGTTCGCCGCCGAGTTCCGCCTGCCGCGCTCCCTCCCCACCAGGGAGAAGAAGAAGCGGGTGAAGGAGCTAATCGACCAGCTCGGCCTGAAGAGAGCGGCGAACACGATCATCGGCGACGAGGGCCACCGCGGCGTGTCGGGAGGCGAGCGCCGGCGCGTCTCCATCGGTGTCGACATCATCCACAACCCGATCATGCTGTTCCTCGACGAGCCCACCTCCGGGCTGGACTCCACCAGCGCGTTCATGGTGGTGACGGTCCTCAAGGCCATCGCGCAGAGCGGCAGCGTCGTCGTCATGTCCATCCACCAGCCGAGCTACCGCATCCTCGGCCTCCTCGACCGCCTCCTGTTCCTCTCCCGCGGGAAGACGGTGTACTACGGCCCGCCGAGCGAGCTGCCGCCGTTCTTCCTCGACTTCGGCAAGCCCATCCCGGACAACGAGAACCCGACGGAGTTCGCGCTGGACCTCATCAAGGAGATGGAGACCGAGACGGAGGGGACCAAGCGTCTCGCCGAGCACAACGCGGCGTGGCAGCTGAAGCACCACGGGGAAGGCCGCGGGTACGGCGGCAAGCCGGGGATGTCCCTCAAGGAGGCCATCAGCGCCAGCATCTCGCGCGGGAAGCTCGTGTCCGGCGCGACCGACGGCACCGTGTCGGTCGCCGCCTCCGACCATTCTGCGCCGCCGCCGTCGTCGTCGTCCGTGTCCAAGTTCGTCAACCCGTTCTGGATCGAGATGGGGGTGCTGACGCGTCGCGCGTTCATCAACACGAAGCGCACGCCGGAGGTGTTCATCACCCGCCTCGCGGCGGTGCTGGTCACCGGGTTCATCCTCGCCACCATCTTCTGGCGCCTGGACGAGTCGCCCAAGGGCGTGCAGGAGCGGCTGGGCTTCTTCGCCATCGCCATGTCCACCATGTACTACACCTGCTCCGACGCGCTCCCGGTGTTCCTCAGCGAGCGCTACATCTTCCTCAGGGAGACGGCGTACAACGCGTACCGCCGCTCATCCTACGTGCTCTCCCACACCATCGTCGGCTTCCCGTCGCTCGTGGTTCTCTCCTTCGCGTTCGCGCTCACCACCTTCTTCTCCGTGGGGCTCGCGGTGGCGTGAACGGGTTCTTCTACTTCGTGGCAATCGTGCTGGCCTCCTTCTGGGCGGGGAGCGGCTTCGCCACGTTCCTCTCCGGCGTGGTGACGCACGTGATGCTGGGGTTCCCCGTGGTGCTCTCCACGCTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCAACCGCGACAGGATCCCGCGCTACTGGCTGTGGTTCCACTACATCTCGCTCGTCAAGTACCCGTACGAGGCGGTGATGCAGAACGAGTTCGGCGACCCGACGAGGTGCTTCGTCCGCGGCGTGCAGATGTTCGACAACACGCCGCTGGCGGCGCTGCCGGCGGCGGTCAAGGTGCGGGTGCTGCAGTCCATGTCGGCGTCGCTCGGCGTGAACATCGGCACGGGGACGTGCATCACCACGGGACCGGACTTCCTGAAGCAGCAGGCGATCACCGACTTCGGCAAGTGGGAGTGCCTCTGGATCACCGTCGCGTGGGGATTCCTCTTCCGCATCCTCTTCTACATCTCGCTGCTGCTCGGCAGCAGGAACAAGCGGAGGTAGACGACGACGACGACCACCTTGCTGATCGATCAGTAGCTCGTACGTGATAGCGATCGTCACCTCGTCTCACCGCAGCGGCGGCGTGGACCGGCCGGCTTCGTTGGAGCAAGCGACGCGTGGGACACCATTGGTTGCATGGTTTCCCTTGTTTTTTTTTTCACTTGTTAAGCATTTCGATGTTTTTTGATTAACCGCCTGTGATTACCATGGGACGGGAGTTGTTTGTAAAATTTGTGTGCAAGTTGCAAGTCGAAATTGTATCTGGATGATATGACATTTTTTTTTCAAAAAAAAAAAAAA]
[+] EMBL AK072135 [ATTGGTAAGAGACTAAGAGAGTGAGCTTGCCGGAGATGTCGCGGTTTGTCGACAAGCTGCCGCTGTTCGACCGGAGGCCGTCGCCGATGGAGGAGGCCGAGGGCCTCCCGCGCAGTGGCTATCTTGGGCAGCTGCACCACCACCAGTACTACCAGCCGCACAGCAACATGCTGCCGCTGGAGCAGTCGCCGCCGACGAGCACGAAGCACACGTCGGTCACGCTCGCGCAGCTCCTGAAGCGCGTGAACGACGCGCGCAGCGGGTCGTCGACGCCCATCTCGTCGCCGCGCTACACCATCGAGCTGGGCGGGTCCAAGCCGGAGTCCGTCAGCAGCGAGAGCGACGACCACCACTCCGACGACGGCGGCAGCGAGGGGCAGCCGAGGGCGCTCGTGCTCAAGTTCACCGACCTGACGTACAGCGTGAAGCAGCGGAGGAAGGGGTCGTGCCTGCCGTTCCGTCGTGCGGCGGCGGACGAGCCCGAGCTGCCCGCGATGAGGACGCTGCTCGACGGCATCTCCGGCGAGGCCCGGGACGGCGAGATCATGGCGGTGCTCGGCGCGAGCGGGTCCGGCAAGAGCACGCTCATCGACGCGCTCGCCAACCGCATCGCCAAGGAGAGCCTCCACGGCTCCGTCACGATCAACGGCGAGTCCATCGACAGCAACCTGCTCAAGGTCATCTCAGCGTACGTCCGGCAGGAGGACCTTCTGTACCCGATGCTCACCGTCGAGGAGACGCTCATGTTCGCCGCCGAGTTCCGCCTGCCGCGCTCCCTCCCCACCAGGGAGAAGAAGAAGCGGGTGAAGGAGCTAATCGACCAGCTCGGCCTGAAGAGAGCGGCGAACACGATCATCGGCGACGAGGGCCACCGCGGCGTGTCGGGAGGCGAGCGCCGGCGCGTCTCCATCGGTGTCGACATCATCCACAACCCGATCATGCTGTTCCTCGACGAGCCCACCTCCGGGCTGGACTCCACCAGCGCGTTCATGGTGGTGACGGTCCTCAAGGCCATCGCGCAGAGCGGCAGCGTCGTCGTCATGTCCATCCACCAGCCGAGCTACCGCATCCTCGGCCTCCTCGACCGCCTCCTGTTCCTCTCCCGCGGGAAGACGGTGTACTACGGCCCGCCGAGCGAGCTGCCGCCGTTCTTCCTCGACTTCGGCAAGCCCATCCCGGACAACGAGAACCCGACGGAGTTCGCGCTGGACCTCATCAAGGAGATGGAGACCGAGACGGAGGGGACCAAGCGTCTCGCCGAGCACAACGCGGCGTGGCAGCTGAAGCACCACGGGGAAGGCCGCGGGTACGGCGGCAAGCCGGGGATGTCCCTCAAGGAGGCCATCAGCGCCAGCATCTCGCGCGGGAAGCTCGTGTCCGGCGCGACCGACGGCACCGTGTCGGTCGCCGCCTCCGACCATTCTGCGCCGCCGCCGTCGTCGTCGTCCGTGTCCAAGTTCGTCAACCCGTTCTGGATCGAGATGGGGGTGCTGACGCGTCGCGCGTTCATCAACACGAAGCGCACGCCGGAGGTGTTCATCACCCGCCTCGCGGCGGTGCTGGTCACCGGGTTCATCCTCGCCACCATCTTCTGGCGCCTGGACGAGTCGCCCAAGGGCGTGCAGGAGCGGCTGGGCTTCTTCGCCATCGCCATGTCCACCATGTACTACACCTGCTCCGACGCGCTCCCGGTGTTCCTCAGCGAGCGCTACATCTTCCTCAGGGAGACGGCGTACAACGCGTACCGCCGCTCATCCTACGTGCTCTCCCACACCATCGTCGGCTTCCCGTCGCTCGTGGTTCTCTCCTTCGCGTTCGCGCTCACCACCTTCTTCTCCGTGGGGCTCGCGGTGGCGTGAACGGGTTCTTCTACTTCGTGGCAATCGTGCTGGCCTCCTTCTGGGCGGGGAGCGGCTTCGCCACGTTCCTCTCCGGCGTGGTGACGCACGTGATGCTGGGGTTCCCCGTGGTGCTCTCCACGCTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCAACCGCGACAGGATCCCGCGCTACTGGCTGTGGTTCCACTACATCTCGCTCGTCAAGTACCCGTACGAGGCGGTGATGCAGAACGAGTTCGGCGACCCGACGAGGTGCTTCGTCCGCGGCGTGCAGATGTTCGACAACACGCCGCTGGCGGCGCTGCCGGCGGCGGTCAAGGTGCGGGTGCTGCAGTCCATGTCGGCGTCGCTCGGCGTGAACATCGGCACGGGGACGTGCATCACCACGGGACCGGACTTCCTGAAGCAGCAGGCGATCACCGACTTCGGCAAGTGGGAGTGCCTCTGGATCACCGTCGCGTGGGGATTCCTCTTCCGCATCCTCTTCTACATCTCGCTGCTGCTCGGCAGCAGGAACAAGCGGAGGTAGACGACGACGACGACCACCTTGCTGATCGATCAGTAGCTCGTACGTGATAGCGATCGTCACCTCGTCTCACCGCAGCGGCGGCGTGGACCGGCCGGCTTCGTTGGAGCAAGCGACGCGTGGGACACCATTGGTTGCATGGTTTCCCTTGTTTTTTTTTTCACTTGTTAAGCATTTCGATGTTTTTTGATTAACCGCCTGTGATTACCATGGGACGGGAGTTGTTTGTAAAATTTGTGTGCAAGTTGCAAGTCGAAATTGTATCTGGATGATATGACA ]
[+] EMBL CA754858 [ CTCTGGATCACCGTCGCGTGGGGATTCCTCTTCCGCATCCTCTTCTACATCTCGCTGCTGCTCGGCAGCAGGAACAAGCGGAGGTAGACGACGACGACGACCACCTTGCTGATCGATCAGTAGCTCGTACGTGATAGCGATCGTCACCTCGTCTCACCGCAGCGGCGGCGTGGACCGGCCGGCTTCGTTGGAGCAAGCGACGCGTGGGACACCATTGGTTGCATGGTTTCCCTTGTTTTTTTTTTCACTTGTTAAACATTTCGATGTTTTTTGATTAACCGCCTGTGATTAACATGGGACGGGAGTTGTTTGTAAAATTTGTGTGCAAGTTGCAAGTCGAAATTGTATCTGGATGATATGACATTTTTTTTTCAAAAAAAAAAAAAA]
consensusID : consensus_4311#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2605 fasta sequence
[TGAACCACGCCACGCCGAATCGTCCGTCGTCCTAGATAGTGCTTCGCTAGCTGTGGGTGTGCATGCCATGGCGCGCGCAGTGCACGACCGCCTCCCGTTCCTAGCCACGCCCCCGCCGGCGCCGGCGAGGGGCAGGAACCCGCCGCTCGCTGAGATGCTCCGCCTCGTCGGCGCTGCCACCGTCGACTCCGACGCCGCCGCCGCCGCCGCGGATGAGGAGGCCAACGCGCTGTCGTTGCCACTGCCGCGCGGTGGTGTTACTCCTCCTCCGCCTGGCGGGCGGACCATCCAGTTCAGGCTGGCGTTCACCAGCCTCACCTACAGCGTCCGCGCGGCGCGGCGGGCGAGGCCCGGCGGCGGCGATGGCGGCGGCGGGTTTCGCCTGCCTCTGCAGAACCGGTGCGACCGCGTCACCGCGGCGGCGCCCGACGCGCACTCGTCCCGCGCGAGGGTGCTGCTGGACGGCATCACCGGGGAGGCGAGGGAGGGCGAGATCCTGGCGGTGATGGGGGCCAGTGGCTCCGGCAAGTCCACGCTCATCGACGCGCTCGCCAACCGCATCTCCCGCGACGCGCTCAAGGGCTCCGTCACGCTCAACGGCGAGCCGCTCACCGGCAACGTCATCAAGTCCATCTCCGCCTACGTCATGCAGGACGATCGGCTGTTCCCCATGCTCACCGTCGCCGAGACGCTCTCCTTCGCCGCCGAGTTCCGCCTCCCGCGCGCGCTGCCCGCCGCCAAGAAGCGCACGCGCGTGCTGGAGCTCATAGAACAGCTCGGCCTCCGCGCGGCGGCGGACACCATCATCGGCGACGAGGGCCACCGTGGAGTCTCGGGAGGCGAGCGCCGGAGGGTCTCCATCGGCACCGACATCATCCATGACCCCATCCTCCTGTTCCTCGACGAGCCCACGTCGGGGCTCGACTCCACCTCGGCGTTCATGGTCGTGCAGGTGCTCCGCAACATCGCCGAGAGCGGCAGCATTGTCATCACTTCCATCCACCAGCCGAGCCAGCGCATCCTCGGCCTTCTTGACCGCCTCATCCTCCTCTCCGGTGGACGCACCGTCTTCAGTGGACCTCCCTCCGCCATCCCGGCCTACTTCGCCGAGTTCGGGTACCCGGTGCCCGACGACGAGAACCGCGCCGAGTTCGCGCTCGACCTGATCCGCGAGTTCGAGTCGTTGCCGGCGGGAACCGGACAGCTCGTCAGCTTCAACAAGACGTGGCAGGTCATGCACGCGGCGAGGCACAACCCAAACGATGATCCGTGGGCGCCAACCATGTCGCTGAAGGAGGCCATCAGCGCGAGCATCTCGCGCGGGAAGCTGGTGTCCGGCTCGGACGTGGCCGGCGAGGCGGCGTCGATGCACACCTACGCGAACCCGTTCTGGGTGGAGATGAAGGTGCTGACGAAGCGGTCGGCGATCAACACGCGGCGCATGCCGGAGCTGTTCCTCATCAGGCTCGGCGCCGTGGTGATCACCGGCGCGATCCTCGCCACCGTGTTCTACAAGCTCGACCAGTCGCCCAAGGGCGCGCAGGAGCGGCTCGGCTTCTTCGCCTTCGCCATGTCCACCATGTTCTACACCTGCGCCGACGCGCTCCCGGTGTTCCTGCACGAGCGCTACATCTTCCTCCGGGAGACCGCCTACGGCGCGTACCGCCGCACCTCCTACGTGCTCTCCAACGCCATCGTCTCCTTCCCGCCGCTCGTCGTGCTCTCCCTCGCCTTCGCCTTCACCACATTCTTCGCCGTCGGCCTCGCCGGCGGCGTGTCCGGGTTCGCCTTCTACACCCTCGCCATCCTCGCCTCCTTCTGGGCCGGCAGCGGGTTCGTCACGTTCCTCTCCGGCGTCATACCGCACGTCATGATCGGCTACACCGTCGTCGTCGCCATCCTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCAACCGGGACAGGATACCGGACTACTGGATATGGTTCCACTACCTCTCACTCGTCAAGTACCCGTTCGAGGGCGTGCTCCAGAACGAGTTCGGCCGCGGCGGCGAGTGCTACGTCCGTGGCACGCAGATGTTCGACAACTCGCCGCTGGCCGTGCTGCCGGACACGGTGAAGACGAGGGTGCTGGCGTCCATCGGCACGGCGCTCGGCGTCAAGATCGGCCCCAACACCTGCGTGATGACCGGGCACAACGTGCTCCGGGAGGCGGCGGTGACGCAGCTCGGCAAGTGGGAGTGCCTCCTCGTCACGGCGGCGTGGGGCTTCTTCTTCCGGCTGCTCTTCTACTTCAGCCTCGTGCTCGGCAGCAAGAACAAGAGGAGGTGATCGAGCCGTACGGACGAGGTTGCACGCGCGCGCGCGCATTTGCGCACGCGTTTGAACGTCCGGGGGCATTAAACGCTTGGGGAGAAATAGAGAGAAAATGATGGCCTAGTTAATTTGAAGCTGTTTAATTTATGCAATTGTTAAGGCGGATATGATGTGATTTCAATTTGGACCCCTTTTTGTTTCCTGTGATTTGTAGCTAAATAAGTGGCTTATAGTCCACTACACTTTTTTTTCTTCTTTTTCTCTTTGTAGTCGCTGTGTTAAAGACTTATATATGAAATGATG]
[+] EMBL AK067556 [TGAACCACGCCACGCCGAATCGTCCGTCGTCCTAGATAGTGCTTCGCTAGCTGTGGGTGTGCATGCCATGGCGCGCGCAGTGCACGACCGCCTCCCGTTCCTAGCCACGCCCCCGCCGGCGCCGGCGAGGGGCAGGAACCCGCCGCTCGCTGAGATGCTCCGCCTCGTCGGCGCTGCCACCGTCGACTCCGACGCCGCCGCCGCCGCCGCGGATGAGGAGGCCAACGCGCTGTCGTTGCCACTGCCGCGCGGTGGTGTTACTCCTCCTCCGCCTGGCGGGCGGACCATCCAGTTCAGGCTGGCGTTCACCAGCCTCACCTACAGCGTCCGCGCGGCGCGGCGGGCGAGGCCCGGCGGCGGCGATGGCGGCGGCGGGTTTCGCCTGCCTCTGCAGAACCGGTGCGACCGCGTCACCGCGGCGGCGCCCGACGCGCACTCGTCCCGCGCGAGGGTGCTGCTGGACGGCATCACCGGGGAGGCGAGGGAGGGCGAGATCCTGGCGGTGATGGGGGCCAGTGGCTCCGGCAAGTCCACGCTCATCGACGCGCTCGCCAACCGCATCTCCCGCGACGCGCTCAAGGGCTCCGTCACGCTCAACGGCGAGCCGCTCACCGGCAACGTCATCAAGTCCATCTCCGCCTACGTCATGCAGGACGATCGGCTGTTCCCCATGCTCACCGTCGCCGAGACGCTCTCCTTCGCCGCCGAGTTCCGCCTCCCGCGCGCGCTGCCCGCCGCCAAGAAGCGCACGCGCGTGCTGGAGCTCATAGAACAGCTCGGCCTCCGCGCGGCGGCGGACACCATCATCGGCGACGAGGGCCACCGTGGAGTCTCGGGAGGCGAGCGCCGGAGGGTCTCCATCGGCACCGACATCATCCATGACCCCATCCTCCTGTTCCTCGACGAGCCCACGTCGGGGCTCGACTCCACCTCGGCGTTCATGGTCGTGCAGGTGCTCCGCAACATCGCCGAGAGCGGCAGCATTGTCATCACTTCCATCCACCAGCCGAGCCAGCGCATCCTCGGCCTTCTTGACCGCCTCATCCTCCTCTCCGGTGGACGCACCGTCTTCAGTGGACCTCCCTCCGCCATCCCGGCCTACTTCGCCGAGTTCGGGTACCCGGTGCCCGACGACGAGAACCGCGCCGAGTTCGCGCTCGACCTGATCCGCGAGTTCGAGTCGTTGCCGGCGGGAACCGGACAGCTCGTCAGCTTCAACAAGACGTGGCAGGTCATGCACGCGGCGAGGCACAACCCAAACGATGATCCGTGGGCGCCAACCATGTCGCTGAAGGAGGCCATCAGCGCGAGCATCTCGCGCGGGAAGCTGGTGTCCGGCTCGGACGTGGCCGGCGAGGCGGCGTCGATGCACACCTACGCGAACCCGTTCTGGGTGGAGATGAAGGTGCTGACGAAGCGGTCGGCGATCAACACGCGGCGCATGCCGGAGCTGTTCCTCATCAGGCTCGGCGCCGTGGTGATCACCGGCGCGATCCTCGCCACCGTGTTCTACAAGCTCGACCAGTCGCCCAAGGGCGCGCAGGAGCGGCTCGGCTTCTTCGCCTTCGCCATGTCCACCATGTTCTACACCTGCGCCGACGCGCTCCCGGTGTTCCTGCACGAGCGCTACATCTTCCTCCGGGAGACCGCCTACGGCGCGTACCGCCGCACCTCCTACGTGCTCTCCAACGCCATCGTCTCCTTCCCGCCGCTCGTCGTGCTCTCCCTCGCCTTCGCCTTCACCACATTCTTCGCCGTCGGCCTCGCCGGCGGCGTGTCCGGGTTCGCCTTCTACACCCTCGCCATCCTCGCCTCCTTCTGGGCCGGCAGCGGGTTCGTCACGTTCCTCTCCGGCGTCATACCGCACGTCATGATCGGCTACACCGTCGTCGTCGCCATCCTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCAACCGGGACAGGATACCGGACTACTGGATATGGTTCCACTACCTCTCACTCGTCAAGTACCCGTTCGAGGGCGTGCTCCAGAACGAGTTCGGCCGCGGCGGCGAGTGCTACGTCCGTGGCACGCAGATGTTCGACAACTCGCCGCTGGCCGTGCTGCCGGACACGGTGAAGACGAGGGTGCTGGCGTCCATCGGCACGGCGCTCGGCGTCAAGATCGGCCCCAACACCTGCGTGATGACCGGGCACAACGTGCTCCGGGAGGCGGCGGTGACGCAGCTCGGCAAGTGGGAGTGCCTCCTCGTCACGGCGGCGTGGGGCTTCTTCTTCCGGCTGCTCTTCTACTTCAGCCTCGTGCTCGGCAGCAAGAACAAGAGGAGGTGATCGAGCCGTACGGACGAGGTTGCACGCGCGCGCGCGCATTTGCGCACGCGTTTGAACGTCCGGGGGCATTAAACGCTTGGGGAGAAATAGAGAGAAAATGATGGCCTAGTTAATTTGAAGCTGTTTAATTTATGCAATTGTTAAGGCGGATATGATGTGATTTCAATTTGGACCCCTTTTTGTTTCCTGTGATTTGTAGCTAAATAAGTGGCTTATAGTCCACTACACTTTTTTTTCTTCTTTTTCTCTTTGTAGTCGCTGTGTTAAAGACTTATATATGAAATGATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4311#0 ATTGGTAAGAGACTAAGAGAGTGAGCTTGCCGGAGATGTCGCGGTTTGTCGACAAGCTGC 60
consensus_4311#1 ---------------------TGAACCACGCCACGCCGAATCG-TCCGTCGTCC--TAGA 36
*** * * * * ** * **** * *
consensus_4311#0 CGCTGTTCGACCGGAGGCCGTCGCCGATGGAGGAGGCCGAGGGCCTCCCGCGCAGTGGCT 120
consensus_4311#1 TAGTGCTTCGCTAGCTGTGGGTGTGCATGCC--ATGGCGCGCGCAGTGCACG-ACCGCCT 93
** * * * * * * *** * * ** * ** * ** * * **
consensus_4311#0 ATCTTGGGCAGCTGCACCACCACCAGTACTACCAGCCGCACAGCAACATGCTGC-CGCTG 179
consensus_4311#1 CCCGTTCCTAGCCACGCCCCCGCCGGCGCCGGC-GAGGGGCAGGAACCCGCCGCTCGCTG 152
* * *** * ** ** ** * * * * * *** *** ** ** *****
consensus_4311#0 GAGCAGTCGCCGCCGACGAGCACGAAGCACACGTCGGTCACGCTCGCGCAGCTCCTGAAG 239
consensus_4311#1 AGATGCTCCGCCTCGTCGG---CGCTGCCACCGTCG---ACTCCGACGCCGCCGCCGCCG 206
** * ** ** ** ** ***** ** * *** ** * * *
consensus_4311#0 CGCGTGAACGACGCGCGCAGCGGGTCGTCGACGCC--CATCTCGTCGCCGCGCTACACCA 297
consensus_4311#1 C-CGCGGATGAGGAGGCCAACGCGCTGTCGTTGCCACTGCCGCGCGGTGGTGTTACTCCT 265
* ** * * ** * * ** ** * **** *** * ** * * * *** **
consensus_4311#0 TCGA-GCTGGGCGGGTCCAAGCCGGAGTCCGTCAGCAGCGAGAGCGACGACCACCA-CTC 355
consensus_4311#1 CCTCCGCCTGGCGGGC--------GGACCATCCAGT--TCAGGCTGGCGTTCACCAGCCT 315
* ** ****** * * *** ** * ** ***** *
consensus_4311#0 CGACGACGGCGGCAGCGAGGGGCAGCCGAGGGCGCTCGTGCTCAAGTTCACCGACCTGAC 415
consensus_4311#1 CACCTACAGCGTCCGCGCGGCGCGGCGGGCGAGGCCCGGCGGCGGCGATGGCGGC--GGC 373
* * ** *** * *** ** ** ** * * ** ** * ** * * *
consensus_4311#0 GTACAGCGTGAAGCAGCGGAGGAAGGGGTCGTGCCTGCCGTTCCGTCGTGCGGCGGCGGA 475
consensus_4311#1 GGGTTTCGCCTGCCTCTGCAGAACCGGTGCGACCGCGTCACCGCG----GCGGCGCCCGA 429
* ** * * ** * ** ** * * * ** ****** * **
consensus_4311#0 CGAGCCCGAGCTGCCCGCGATGAGGACGCTGCTCGACGGCATCTCCGGCGAGGCCCGGGA 535
consensus_4311#1 CGCGCACTCGT--CCCGCG-CGAGGGTGCTGCTGGACGGCATCACCGGGGAGGCGAGGGA 486
** ** * * ****** **** ****** ********* **** ***** ****
consensus_4311#0 CGGCGAGATCATGGCGGTGCTCGGCGCGAGCGGGTCCGGCAAGAGCACGCTCATCGACGC 595
consensus_4311#1 GGGCGAGATCCTGGCGGTGATGGGGGCCAGTGGCTCCGGCAAGTCCACGCTCATCGACGC 546
********* ******** * ** ** ** ** ********* ***************
consensus_4311#0 GCTCGCCAACCGCATCGCCAAGGAGAGCCTCCACGGCTCCGTCACGATCAACGGCGAGTC 655
consensus_4311#1 GCTCGCCAACCGCATCTCCCGCGACGCGCTCAAGGGCTCCGTCACGCTCAACGGCGAGCC 606
**************** ** ** *** * ************ *********** *
consensus_4311#0 CATCGACAGCAACCTGCTCAAGGTCATCTCAGCGTACGTCCGGCAGGAGGACCTTCTGTA 715
consensus_4311#1 GCTCACCGGCAACGTCATCAAGTCCATCTCCGCCTACGTCATGCAGGACGATCGGCTGTT 666
** * ***** * ***** ****** ** ****** ****** ** * ****
consensus_4311#0 CCCGATGCTCACCGTCGAGGAGACGCTCATGTTCGCCGCCGAGTTCCGCCTGCCGCGCTC 775
consensus_4311#1 CCCCATGCTCACCGTCGCCGAGACGCTCTCCTTCGCCGCCGAGTTCCGCCTCCCGCGCGC 726
*** ************* ********* ******************** ****** *
consensus_4311#0 CCTCCCCACCAGGGAGAAGAAGAAGCGGGTGAAGGAGCTAATCGACCAGCTCGGCCTGAA 835
consensus_4311#1 GCTGCCCGCCGCCAAGAAGCGCACGCGCGTGCTGGAGCTCATAGAACAGCTCGGCCTCCG 786
** *** ** ***** * *** *** ****** ** ** ***********
consensus_4311#0 GAGAGCGGCGAACACGATCATCGGCGACGAGGGCCACCGCGGCGTGTCGGGAGGCGAGCG 895
consensus_4311#1 CGCGGCGGCGGACACCATCATCGGCGACGAGGGCCACCGTGGAGTCTCGGGAGGCGAGCG 846
****** **** *********************** ** ** **************
consensus_4311#0 CCGGCGCGTCTCCATCGGTGTCGACATCATCCACAACCCGATCATGCTGTTCCTCGACGA 955
consensus_4311#1 CCGGAGGGTCTCCATCGGCACCGACATCATCCATGACCCCATCCTCCTGTTCCTCGACGA 906
**** * *********** ************ **** *** * **************
consensus_4311#0 GCCCACCTCCGGGCTGGACTCCACCAGCGCGTTCATGGTGGTGACGGTCCTCAAGGCCAT 1015
consensus_4311#1 GCCCACGTCGGGGCTCGACTCCACCTCGGCGTTCATGGTCGTGCAGGTGCTCCGCAACAT 966
****** ** ***** ********* *********** *** *** *** ***
consensus_4311#0 CGCGCAGAGCGGCAGCGTCGTCGTCATGTCCATCCACCAGCCGAGCTACCGCATCCTCGG 1075
consensus_4311#1 CGCCGAGAGCGGCAGCATTGTCATCACTTCCATCCACCAGCCGAGCCAGCGCATCCTCGG 1026
*** *********** * *** *** ****************** * ***********
consensus_4311#0 CCTCCTCGACCGCCTCCTGTTCCTCTCCCGCGGGAAGACGGTGTACTACGGCCCGCCGAG 1135
consensus_4311#1 CCTTCTTGACCGCCTCATCCTCCTCTCCGGTGGACGCACCGTCTTCAGTGGACCTCCCTC 1086
*** ** ********* * ******** * ** ** ** * * ** ** **
consensus_4311#0 CGAGCTGCCGCCGTTCTTCCTCGACTTCGGCAAGCCCATCCCGGACAACGAGAACCCGAC 1195
consensus_4311#1 CGCCATCCCGGCCTACTTCGCCGAGTTCGGGTACCCGGTGCCCGACGACGAGAACCGCGC 1146
** * *** * * **** *** ***** * ** * ** *** ********* *
consensus_4311#0 GGAGTTCGCGCTGGACCTCATCAAGGAGATGGAGACCGAGACGGAGGGGACCAAGCGTCT 1255
consensus_4311#1 CGAGTTCGCGCTCGACCTGATCCGCGAGTTCGAGTCGTTGCCGGCGGGAACCGGACAGCT 1206
*********** ***** *** *** * *** * * *** *** *** * **
consensus_4311#0 CGCCGAGCACAACGCGGCGTGGCAGCTGAAGCACCACGGGGAAGGCCGCGGGTACGGCGG 1315
consensus_4311#1 CGTCAGCTTCAACAAGACGTGGCAGGTCATGCACGCGGCGAGGCACAACCCAAACGATGA 1266
** * **** * ******** * * **** * * * * *** *
consensus_4311#0 CAAGCCGGGG------ATGTCCCTCAAGGAGGCCATCAGCGCCAGCATCTCGCGCGGGAA 1369
consensus_4311#1 TCCGTGGGCGCCAACCATGTCGCTGAAGGAGGCCATCAGCGCGAGCATCTCGCGCGGGAA 1326
* ** * ***** ** ***************** *****************
consensus_4311#0 GCTCGTGTCCGGCGCGACCGACGGCACCGTGTCGGTCGCCGCCTCCGACCATTCTGCGCC 1429
consensus_4311#1 GCTGGTGTCCGGC------------------TCGGACGTGGCCGGCGA------------ 1356
*** ********* **** ** *** ***
consensus_4311#0 GCCGCCGTCGTCGTCGTCCGTGTCCAAGTTCGTCAACCCGTTCTGGATCGAGATGGGGGT 1489
consensus_4311#1 ---------GGCGGCGTCGATGCACACCTACGCGAACCCGTTCTGGGTGGAGATGAAGGT 1407
* ** **** ** ** * ** ************ * ****** ***
consensus_4311#0 GCTGACGCGTCGCGCGTTCATCAACACGAAGCGCACGCCGGAGGTGTTCATCACCCGCCT 1549
consensus_4311#1 GCTGACGAAGCGGTCGGCGATCAACACGCGGCGCATGCCGGAGCTGTTCCTCATCAGGCT 1467
******* ** ** ********* ***** ******* ***** *** * * **
consensus_4311#0 CGCGGCGGTGCTGGTCACCGGGTTCATCCTCGCCACCATCTTCTGGCGCCTGGACGAGTC 1609
consensus_4311#1 CGGCGCCGTGGTGATCACCGGCGCGATCCTCGCCACCGTGTTCTACAAGCTCGACCAGTC 1527
** ** *** ** ******* ************ * **** ** *** ****
consensus_4311#0 GCCCAAGGGCGTGCAGGAGCGGCTGGGCTTCTTCGCCATCGCCATGTCCACCATGTACTA 1669
consensus_4311#1 GCCCAAGGGCGCGCAGGAGCGGCTCGGCTTCTTCGCCTTCGCCATGTCCACCATGTTCTA 1587
*********** ************ ************ ****************** ***
consensus_4311#0 CACCTGCTCCGACGCGCTCCCGGTGTTCCTCAGCGAGCGCTACATCTTCCTCAGGGAGAC 1729
consensus_4311#1 CACCTGCGCCGACGCGCTCCCGGTGTTCCTGCACGAGCGCTACATCTTCCTCCGGGAGAC 1647
******* ********************** ******************* *******
consensus_4311#0 GGCGTACAACGCGTACCGCCGCTCATCCTACGTGCTCTCCCACACCATCGTCGGCTTCCC 1789
consensus_4311#1 CGCCTACGGCGCGTACCGCCGCACCTCCTACGTGCTCTCCAACGCCATCGTCTCCTTCCC 1707
** *** ************* * *************** ** ******** ******
consensus_4311#0 GTCGCTCGTGGTTCTCTCCTTCGCGTTCGCGCTCACCACCTTCTTCTCCGTGGGGCTCGC 1849
consensus_4311#1 GCCGCTCGTCGTGCTCTCCCTCGCCTTCGCCTTCACCACATTCTTCGCCGTCGGCCTCGC 1767
* ******* ** ****** **** ***** ******* ****** **** ** *****
consensus_4311#0 -GGTGGCGTGAACGGGTTCTTCTACTTCGTGGCAATCGTGCTGGCCTCCTTCTGGGCGGG 1908
consensus_4311#1 CGGCGGCGTGTCCGGGTTCGCCTTCTACACCCTCGCCATCCTCGCCTCCTTCTGGGCCGG 1827
** ****** ******* ** ** * * * ** ************** **
consensus_4311#0 GAGCGGCTTCGCCACGTTCCTCTCCGGCGTGGTGACGCACGTGATGCTGGGGTTCCCCGT 1968
consensus_4311#1 CAGCGGGTTCGTCACGTTCCTCTCCGGCGTCATACCGCACGTCATGATCGGCTACACCGT 1887
***** **** ****************** * ******* *** * ** * * ****
consensus_4311#0 GGTGCTCTCCACGCTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCAACCGCGACAG 2028
consensus_4311#1 CGTCGTCGCCATCCTCGCCTACTTCCTCCTCTTCAGCGGCTTCTTCATCAACCGGGACAG 1947
** ** *** ***************************************** *****
consensus_4311#0 GATCCCGCGCTACTGGCTGTGGTTCCACTACATCTCGCTCGTCAAGTACCCGTACGAGGC 2088
consensus_4311#1 GATACCGGACTACTGGATATGGTTCCACTACCTCTCACTCGTCAAGTACCCGTTCGAGGG 2007
*** *** ******* * ************ **** **************** *****
consensus_4311#0 GGTGATGCAGAACGAGTTCGGCGACC-CGACGAGGTGCTTCGTCCGCGGCGTGCAGATGT 2147
consensus_4311#1 CGTGCTCCAGAACGAGTTCGGCCGCGGCGGCGAG-TGCTACGTCCGTGGCACGCAGATGT 2066
*** * *************** * ** **** **** ****** *** ********
consensus_4311#0 TCGACAACACGCCGCTGGCGGCGCTGCCGGCGGCGGTCAAGGTGCGGGTGCTGCAGTCCA 2207
consensus_4311#1 TCGACAACTCGCCGCTGGCCGTGCTGCCGGACACGGTGAAGACGAGGGTGCTGGCGTCCA 2126
******** ********** * ******** **** *** * ******** *****
consensus_4311#0 TGTCGGCGTCGCTCGGCGTGAACATCGGCACGGGGACGTGCATCACCACGGGACCGGACT 2267
consensus_4311#1 TCGGCACGGCGCTCGGCGTCAAGATCGGCCCCAACACCTGCGTGATGACCGGGCACAACG 2186
* ** ********** ** ****** * ** *** * * ** ** * **
consensus_4311#0 TCCTGAAGCAGCAGGCGATCACCGACTTCGGCAAGTGGGAGTGCCTCTGGATCACCGTCG 2327
consensus_4311#1 TGCTCCGGGAGGCGGCGGTGACGCAGCTCGGCAAGTGGGAGTGCCTCCTCGTCACGGCGG 2246
* ** * ** **** * ** * ******************** **** * *
consensus_4311#0 CGTGGGGATTCCTCTTCCGCATCCTCTTCTACATCTCGCTGCTGCTCGGCAGCAGGAACA 2387
consensus_4311#1 CGTGGGGCTTCTTCTTCCGGCTGCTCTTCTACTTCAGCCTCGTGCTCGGCAGCAAGAACA 2306
******* *** ******* * ********* ** ** ************ *****
consensus_4311#0 AGCGGAGGTAGACGA-CGACGACGACCACCTTGC-----TGATCGATCAGTAGCTCGTAC 2441
consensus_4311#1 AGAGGAGGTGATCGAGCCGTACGGACGAGGTTGCACGCGCGCGCGCGCATTTGCGCACGC 2366
** ****** *** * *** * **** * ** ** * ** * *
consensus_4311#0 GTGATAGCGATCGTCACCTCGTCTCACC---GCAGCGGCGGCGTGGACCGGCCGGCTTCG 2498
consensus_4311#1 GTTTGAACGTCCGGGGGCATTAAACGCTTGGGGAGAAATAGAGAGAAAATGATGGCCTAG 2426
** * ** ** * * * * ** * * * * * *** * *
consensus_4311#0 TTGGAGC-AAGCGACGCGTGGGACACCATTGGTTGCATGGTTTC--CCTTGTTTTTTTTT 2555
consensus_4311#1 TTAATTTGAAGCTGTTTAATTTATGCAATTGTTAAGGCGGATATGATGTGATTTCAATTT 2486
** **** * * **** * ** * * *** ***
consensus_4311#0 TCACTTGTTAAGCATTTCGATGTTTTTTGATTAACCGCCTGTGATTACCATGGGACGGGA 2615
consensus_4311#1 GGACCCCTTTTTGTTTCCTGTGATTTGTAGCTAAATA--AGTGGCTTATAGTCCACTACA 2544
** ** ** * ** *** * *** *** * * ** *
consensus_4311#0 GTTGTTTGTAAAATTTGTGTGCAAGTTGCAA--GTCGAAATTGTATCTGGATGATATGAC 2673
consensus_4311#1 CTTTTTTTTCTTCTTTTTCTCTTTGTAGTCGCTGTGTTAAAGACTTATATATGAAATGAT 2604
** *** * *** * * ** * ** ** * * **** ****
consensus_4311#0 ATTTTTTTTTCAAAAAAAAAAAAAA 2698
consensus_4311#1 G------------------------ 2605
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||