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Oryza sativa
cluster # 4318 cluster # 4318       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4318#0 length = 1550 sequences # 3  
consensusID : consensus_4318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1550
fasta sequence 
                              [AGACAGACAGATACATCGATCGATCGATCAGAGCTTTTTCTATCATCATTAGCTAGCAAGATGAAGCAGTACTACAAAGCAGCGCTGCTTCGCTACTGGGTAGTAGTCCCGTTCCTCCTGTGGCTGGTAGCCACGGAGGAGCAACTCGCCGCCGGCGCCGTGGCCGGGGCAGCTGCCGAGTCGTCGTCGACTTGGGGCGGCCAGGGCCAGCTGCAGCTGCCTCTCTGGGTGCGACCCGGAGACCGGCGCCTCCTGGGGATGTCTGTGGCCGGCATGGCGGTGGATGCCGTCGTGGCGGCCGACGGCACCGGCCAGTACACTACCATCAAGCAAGCCGTGAAGGCAGCAGAGGCGGACACGAGCGGGCGCCGGTACACAATCCATGTGAAAGCTGGCAAGTACGTCGAAGACGTTGAGATATGGAGGCCTAATATTACCATGATAGGCGACGGGATCGGGCGTACCATAATCAGCGGCATGAAGAGCAAAAACAAGAATCGGGGGACGGCCTGTACGGGCACACTGAACGTGCAAAAGGACGGGTTCATCGCGCGAGAGCTTACGGTGGAGAACACCGCGGGGCCGCAGGCAATGCAGGCGGCGGCGGTGGTGGTGAAGTCGGATCGCGCCGTCTTCTTCAGGTGCGAGATAACGGGTTACCAGGACACGCTGCTGGCAGATGTTTACAGGCAGTTCTACAGGGAATGTGTTATCTCCGGGACAATTGATTTCGTGTGGGGCGAGGCGACGGCCGTCTTCCAGATGTGCCACCTCCTGGTGCGTCGCCCGTTGGAGGGCTCCCACAACACCATCACCGCGCAAGGGCGCAACCACTCCGAGCCCGTCGTCGCACGCTCGGGTTTCGTATTTCAGGAGTGCAACGTGTCGACCAAGGAGGACCTGAGGGGCGTGGACACCTACCTGGGCCGCCCCTGGCACCCGGACTCCCGCGTCATCTTCATGTCGTCCTACTTGGACGGCAACGTGGTCAATCCCAAGGGATGGGTGGCGTGGCGCATCAACAACGCCACCGACGAGCGCTCCACCGCCAGCACCGTCTACTACGCGGAGTACAACAACACTGGGGCTGGGGCCAACGTCACCCAGCGTGTTAACTGGCATGGTTTCCACCTTCTTGCACCACACGAGGTACGCAATTTCACCGTTGACAGCTTCATCGACGGTGGCAGTTGGCTGCCAGAGACCAACGTCCCGTACCATCTCGATCTCGATCTCGGTCTGTAATAATACCTGCTACTCTCTTTATTTACTGTTTGCCTGCCTATATTTGCTTGGTATTGGTATTGTATCATCGATCTCGATGTGCTAGCTCCTGTGTGTGTAGTATGCCATGGTTTGTACGTAACTGGTACTGTATGATGCATGCGTGCTCCTGTGTGTGTGTGTATATGCGATATGATGGTTTGTAACTGGTACTGTATGATCTCGATGTGCTCCGATGTGGCTGTGTGTATTGCGATGGTTAATGGTTTGTAACTTAATTTTCTTTCTTTATGCACTGTCTGAACGAGGAATAAGCACTGTATATA]

[+] EMBL AK106909             [AGACAGACAGATACATCGATCGATCGATCAGAGCTTTTTCTATCATCATTAGCTAGCAAGATGAAGCAGTACTACAAAGCAGCGCTGCTTCGCTACTGGGTAGTAGTCCCGTTCCTCCTGTGGCTGGTAGCCACGGAGGAGCAACTCGCCGCCGGCGCCGTGGCCGGGGCAGCTGCCGAGTCGTCGTCGACTTGGGGCGGCCAGGGCCAGCTGCAGCTGCCTCTCTGGGTGCGACCCGGAGACCGGCGCCTCCTGGGGATGTCTGTGGCCGGCATGGCGGTGGATGCCGTCGTGGCGGCCGACGGCACCGGCCAGTACACTACCATCAAGCAAGCCGTGAAGGCAGCAGAGGCGGACACGAGCGGGCGCCGGTACACAATCCATGTGAAAGCTGGCAAGTACGTCGAAGACGTTGAGATATGGAGGCCTAATATTACCATGATAGGCGACGGGATCGGGCGTACCATAATCAGCGGCATGAAGAGCAAAAACAAGAATCGGGGGACGGCCTGTACGGGCACACTGAACGTGCAAAAGGACGGGTTCATCGCGCGAGAGCTTACGGTGGAGAACACCGCGGGGCCGCAGGCAATGCAGGCGGCGGCGGTGGTGGTGAAGTCGGATCGCGCCGTCTTCTTCAGGTGCGAGATAACGGGTTACCAGGACACGCTGCTGGCAGATGTTTACAGGCAGTTCTACAGGGAATGTGTTATCTCCGGGACAATTGATTTCGTGTGGGGCGAGGCGACGGCCGTCTTCCAGATGTGCCACCTCCTGGTGCGTCGCCCGTTGGAGGGCTCCCACAACACCATCACCGCGCAAGGGCGCAACCACTCCGAGCCCGTCGTCGCACGCTCGGGTTTCGTATTTCAGGAGTGCAACGTGTCGACCAAGGAGGACCTGAGGGGCGTGGACACCTACCTGGGCCGCCCCTGGCACCCGGACTCCCGCGTCATCTTCATGTCGTCCTACTTGGACGGCAACGTGGTCAATCCCAAGGGATGGGTGGCGTGGCGCATCAACAACGCCACCGACGAGCGCTCCACCGCCAGCACCGTCTACTACGCGGAGTACAACAACACTGGGGCTGGGGCCAACGTCACCCAGCGTGTTAACTGGCATGGTTTCCACCTTCTTGCACCACACGAGGTACGCAATTTCACCGTTGACAGCTTCATCGACGGTGGCAGTTGGCTGCCAGAGACCAACGTCCCGTACCATCTCGATCTCGATCTCGGTCTGTAATAATACCTGCTACTCTCTTTATTTACTGTTTGCCTGCCTATATTTGCTTGGTATTGGTATTGTATCATCGATCTCGATGTGCTAGCTCCTGTGTGTGTAGTATGCCATGGTTTGTACGTAACTGGTACTGTATGATGCATGCGTGCTCCTGTGTGTGTGTGTATATGCGATATGATGGTTTGTAACTGGTACTGTATGATCTCGATGTGCTCCGATGTGGCTGTGTGTATTGCGATGGTTAATGGTTTGTAACTTAATTTTCTTTCTTTATGCACTGTCTGAACGAGGAATAAGCACTGTATATA]
[+] EMBL AU183886             [                CGATCGATCGATCAGAGCTTTTTCTATCATCATTAGCTAGCAAGATGAAGCAGTACTACAAAGCAGCGCTGCTTCGCTACTGGGTAGTAGTCCCGTTCCTCCTGTGGCTGGTAGCCACGGAGGAGCAACTCGCCGCCGGCGCCGTGGCCGGGGCAGCTGCCGAGTCGTCGTCGACTTGGGGCGGCCAGGGCCAGCTGCAGCTGCCTCTCTGGGTGCGACCCGGAGACCGGCGCCTCCTGGGGATGTCTGTGGCCGGCATGGCGGTGGATGCCGTCGTGGCGGCCGACGGCACCGGCCAGTACACTACCATCAAGCAAGCCGTGAAGGCAGCAGAGGCGGACACGAGCGGGCGCCGGTACACAATCCATGTGAAAGCTGGCAAGTACGTCGAAGACGTTGAGATATGGAGGCCTAATATTACCATGATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU101495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACGTTGGCCGTTGGCTGCCAGAGACCAACGCCCCGTACCATCTCGATCTCGATCTCGGTCTGTAATAATACCTGCTACTCTCTTTATTTACTGTTTGCCTGCCTATATTTGCTTGGTATTGGTATTGTATCATCGATCTCGATGTGCTAGCCCCTGTGTGTGTNGTATGCCATGGTTTGTACGTAACTGGTACTGTATGATGCATGCGTGCTCCTGTGTGTGTGTGTATATGCGATATGATGGTTTGTAACTGGTNCTGTATGATCTCGATGTGCTCCGATGTGGCTGTGTGTATTGCGATGGTTNATGGTTTGTNACTTNATTTTCTTTCTTTAaaaaaa                             ]




>consensus_4318#0
AGACAGACAGATACATCGATCGATCGATCAGAGCTTTTTCTATCATCATTAGCTAGCAAG
ATGAAGCAGTACTACAAAGCAGCGCTGCTTCGCTACTGGGTAGTAGTCCCGTTCCTCCTG
TGGCTGGTAGCCACGGAGGAGCAACTCGCCGCCGGCGCCGTGGCCGGGGCAGCTGCCGAG
TCGTCGTCGACTTGGGGCGGCCAGGGCCAGCTGCAGCTGCCTCTCTGGGTGCGACCCGGA
GACCGGCGCCTCCTGGGGATGTCTGTGGCCGGCATGGCGGTGGATGCCGTCGTGGCGGCC
GACGGCACCGGCCAGTACACTACCATCAAGCAAGCCGTGAAGGCAGCAGAGGCGGACACG
AGCGGGCGCCGGTACACAATCCATGTGAAAGCTGGCAAGTACGTCGAAGACGTTGAGATA
TGGAGGCCTAATATTACCATGATAGGCGACGGGATCGGGCGTACCATAATCAGCGGCATG
AAGAGCAAAAACAAGAATCGGGGGACGGCCTGTACGGGCACACTGAACGTGCAAAAGGAC
GGGTTCATCGCGCGAGAGCTTACGGTGGAGAACACCGCGGGGCCGCAGGCAATGCAGGCG
GCGGCGGTGGTGGTGAAGTCGGATCGCGCCGTCTTCTTCAGGTGCGAGATAACGGGTTAC
CAGGACACGCTGCTGGCAGATGTTTACAGGCAGTTCTACAGGGAATGTGTTATCTCCGGG
ACAATTGATTTCGTGTGGGGCGAGGCGACGGCCGTCTTCCAGATGTGCCACCTCCTGGTG
CGTCGCCCGTTGGAGGGCTCCCACAACACCATCACCGCGCAAGGGCGCAACCACTCCGAG
CCCGTCGTCGCACGCTCGGGTTTCGTATTTCAGGAGTGCAACGTGTCGACCAAGGAGGAC
CTGAGGGGCGTGGACACCTACCTGGGCCGCCCCTGGCACCCGGACTCCCGCGTCATCTTC
ATGTCGTCCTACTTGGACGGCAACGTGGTCAATCCCAAGGGATGGGTGGCGTGGCGCATC
AACAACGCCACCGACGAGCGCTCCACCGCCAGCACCGTCTACTACGCGGAGTACAACAAC
ACTGGGGCTGGGGCCAACGTCACCCAGCGTGTTAACTGGCATGGTTTCCACCTTCTTGCA
CCACACGAGGTACGCAATTTCACCGTTGACAGCTTCATCGACGGTGGCAGTTGGCTGCCA
GAGACCAACGTCCCGTACCATCTCGATCTCGATCTCGGTCTGTAATAATACCTGCTACTC
TCTTTATTTACTGTTTGCCTGCCTATATTTGCTTGGTATTGGTATTGTATCATCGATCTC
GATGTGCTAGCTCCTGTGTGTGTAGTATGCCATGGTTTGTACGTAACTGGTACTGTATGA
TGCATGCGTGCTCCTGTGTGTGTGTGTATATGCGATATGATGGTTTGTAACTGGTACTGT
ATGATCTCGATGTGCTCCGATGTGGCTGTGTGTATTGCGATGGTTAATGGTTTGTAACTT
AATTTTCTTTCTTTATGCACTGTCTGAACGAGGAATAAGCACTGTATATA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)