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Oryza sativa
cluster # 4320 cluster # 4320       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4320#0 length = 1975 sequences # 2  
consensus_4320#1 length = 1541 sequences # 1  

consensusID : consensus_4320#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1975
fasta sequence
                              [GGAATCTGTTGCTTTGCTTTGCTTCGGTTAGCTTCTTTCACAGCTAAACAACGCCTTCTTTTTCCTCTTTTGATGATGATACTGTTGTTTTACGTGTTCAGATGATGGAGAAGGATCAGAGGAAGGGCGCCATGCCGGTGAAGAAGGGATCATCGGCCAACGCGGTCACCAAAGGCATCACGAACAGAATCCAAGCGAGGAGAGAGCGGAAGCTCGCACTGCAGCAAGATGTGGACAAGCTGAAGAAGAAGCTGAGGCACGAGGAGAACGTCCACCGAGCCCTCGAGAGGGCGTTCACGAGGCCGCTCGGCGCTCTGCCTCGCCTGCCGCCGTATCTGCCATCTCAAACACTGGCGCTTCTCGCGGAGGTGGCGGTGCCGGAAGAAGAGGTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTCTCCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATCCAGACTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGGCTTTGATCCGGAGGCTTTCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTACAATTCGTGCATGATGAATGCATTTCTCGAGCAAGGGATACCTACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGTGGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGCGGCTGCCCTACAGCGTGAAGCATGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACGTGACGATGCGAGGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTCCCCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAGGGACTACCTGCAGTCGGCGGTGGTGGTGTCGGCGCCGGCGAAGGTGGCGATCCCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTGCCTCCAGCTACCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCATGCAGGTCCTGCCGTACGAATTCAGATTCAGGTACCTGCTGGCCTCATGAAGAGAGGCCAGTGAGTAGCAGCAATCAGCGAGTGAATTCGAGGGTGTTTTACTGCACCTTGTACACAGGCTTCCAATAATTGTGAGTTTTGTTCTTCGGTGATGTGAATGAATGAAAGGAAGTATAAAAGG]

[+] EMBL AK068942             [GGAATCTGTTGCTTTGCTTTGCTTCGGTTAGCTTCTTTCACAGCTAAACAACGCCTTCTTTTTCCTCTTTTGATGATGATACTGTTGTTTTACGTGTTCAGATGATGGAGAAGGATCAGAGGAAGGGCGCCATGCCGGTGAAGAAGGGATCATCGGCCAACGCGGTCACCAAAGGCATCACGAACAGAATCCAAGCGAGGAGAGAGCGGAAGCTCGCACTGCAGCAAGATGTGGACAAGCTGAAGAAGAAGCTGAGGCACGAGGAGAACGTCCACCGAGCCCTCGAGAGGGCGTTCACGAGGCCGCTCGGCGCTCTGCCTCGCCTGCCGCCGTATCTGCCATCTCAAACACTGGCGCTTCTCGCGGAGGTGGCGGTGCCGGAAGAAGAGGTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTCTCCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATCCAGACTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGGCTTTGATCCGGAGGCTTTCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTACAATTCGTGCATGATGAATGCATTTCTCGAGCAAGGGATACCTACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGTGGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGCGGCTGCCCTACAGCGTGAAGCATGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACGTGACGATGCGAGGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTCCCCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAGGGACTACCTGCAGTCGGCGGTGGTGGTGTCGGCGCCGGCGAAGGTGGCGATCCCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTGCCTCCAGCTACCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCATGCAGGTCCTGCCGTACGAATTCAGATTCAGGTACCTGCTGGCCTCATGAAGAGAGGCCAGTGAGTAGCAGCAATCAGCGAGTGAATTCGAGGGTGTTTTACTGCACCTTGTACACAGGCTTCCAATAATTGTGAGTTTTGTTCTTCGGTGATGTGAATGAAT                  ]
[+] EMBL AK060628             [                                                                                                                                                                                                                                                                                                                                                                                                             GCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTCTCCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATCCAGACTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGGCTTTGATCCGGAGGCTTCCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTACAATTCGTGCATGATGAATGCATTTCTCGAGCAAGGGATACCTACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGTGGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGCGGCTGCCCTACAACGTGAAGCATGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACGTGACGATGCGAGGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTCCCCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAGGGACTACCTGCAGTCGGCGGTGGTGGTGTCGGCGCCGGCGAAGGTGGCGATCCCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTGCCTCCAGCTGCCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCGTGCAGGTCCTGCCGTACGAATTCAGATTCAGGTACCTGCTGGCCTCATGAAGAGAGGCCAGTGAGTAGCAGCAATCAGCGAGTGAATTCGAGGGTGTTTTACTGCACCTTGTACACAGGCTTCCAATAATTGTGAGTTTTGTTCTTCGGTGATGTGAATGAATGAAAGGAAGTATAAAAGG]


>consensus_4320#0 GGAATCTGTTGCTTTGCTTTGCTTCGGTTAGCTTCTTTCACAGCTAAACAACGCCTTCTT TTTCCTCTTTTGATGATGATACTGTTGTTTTACGTGTTCAGATGATGGAGAAGGATCAGA GGAAGGGCGCCATGCCGGTGAAGAAGGGATCATCGGCCAACGCGGTCACCAAAGGCATCA CGAACAGAATCCAAGCGAGGAGAGAGCGGAAGCTCGCACTGCAGCAAGATGTGGACAAGC TGAAGAAGAAGCTGAGGCACGAGGAGAACGTCCACCGAGCCCTCGAGAGGGCGTTCACGA GGCCGCTCGGCGCTCTGCCTCGCCTGCCGCCGTATCTGCCATCTCAAACACTGGCGCTTC TCGCGGAGGTGGCGGTGCCGGAAGAAGAGGTCGTCAGGCTCGAGGAGCAGGTGGTCAATT TCCGGCAAGGACTCTACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCC CCGGCGGCGAGGGATGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAG AGGTCTCTCCGGCAAATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCG GTGCAAAGCAAACGCCGAGAAAGCCTTCTCCTTCGGCGGCGGTGGCGCAAGACGACCGCT CCGGCGCCGGGAAAGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATT CGCCGCTGCTGCAGAAGGCATCAAAATCCAGACTGCCGACAGCAGCAGCGCCTGAGAAAC GCAGGGCTACTGCTCAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTG TCAGCAATAATTCAGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGG AGGAACTGTTGAGATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCG GCCAAGACGAGGAGCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAG AGGACGCATACCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGT CATACAAGCGATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACG ACACCATGCTTACCCGGAAACTCAAGGCTTTGATCCGGAGGCTTTCATCGGTTGACCTGA CGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTACAATTCGTGCATGA TGAATGCATTTCTCGAGCAAGGGATACCTACCACCCCTCATATGCTCGTGGCAATGATGC CGAAGGCGACAATAAATGTGGGTGGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCA TCCTGCGGCTGCCCTACAGCGTGAAGCATGTGAATCCTGGTGGAGTGACCAAGGGCGCCG CCGACGACGTGACGATGCGAGGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCT TCGCGCTCTCCTGCGGCAGCTGGTCCTCCCCTGCTGTGAGGGTGTACACGGCGCGGGGAG TGGAGGAGGAGCTGGAGGCGGCGAAGAGGGACTACCTGCAGTCGGCGGTGGTGGTGTCGG CGCCGGCGAAGGTGGCGATCCCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGG ACGTGGACTCCCTCATGGACTGGGTGTGCCTCCAGCTACCGAGCGAGCTGCGGCAGAAGG CGATGAGGATCGTGGAGGACGGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCATGCAGG TCCTGCCGTACGAATTCAGATTCAGGTACCTGCTGGCCTCATGAAGAGAGGCCAGTGAGT AGCAGCAATCAGCGAGTGAATTCGAGGGTGTTTTACTGCACCTTGTACACAGGCTTCCAA TAATTGTGAGTTTTGTTCTTCGGTGATGTGAATGAATGAAAGGAAGTATAAAAGG



consensusID : consensus_4320#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1541
fasta sequence
                              [GGCTTCAAAGCTCAGCAGAGCTTTCTGTGTTCAACAAGTTTTGTACACCTCACTCCTGTTGCTTTCGCGTGCCAATTCGGATGGTTTTCGCTCTGAGTTTTTGAAATGGGCTCCGGGGGATCCATTCCAGTCGAGAGCAGTTCAAATTCGGTGATGGAGAGGCCCAACTCGAAGATTCCGGCGATGAAGGCGTCGTCCTCCAATGCTGCGGCGCCCCAGATGATCATGAACAGGAGCCAATCCAGGAGAGACAGGAAGATTGCACTGCAGCAAGACGTGGACAAGCTGAGGAAGAAGCTGCGGCACGAGGAGAACGTCCACCGAGCTCTGGAGCGCGCCTTCACGAGGCCACTCGGCGCTCTCCCTCGCCTTCCACCTTACCTGCCTTCTCAGACGCTGGAGCTCCTCGCCGAGGTCGCGGTCTTGGAGGAGGAGGTCGTCCGGCTCGAGGAGCAGGTCGTCAGCTTCCGGCAAGGGCTCTACGAGGAGGCTGTCACCATCTCCATGGCGAAGAGCGCGTACTTCTCCGACACCGACCGGTGCACGCCGGCGCGCCATGGCCAAGTTCCCGACCAAGCTGCTAGTGCTAGCTGGTCGTCTCTGAAGCGAGTCACCAATGTCAAGCAGACGCCAAGAAGGACTATTCCTTCCATGAACCATGGAGGTGATCGTCCTGGGAAGGAGAACCAATCGTGTACCACCAACTCTTTCAGAGATCACAGCCGGTTCCCTCTGAAAACCGTGCCAAAATGCAGTAATCCAGAAGAGGAGAAATGTGCCGATTTTCAGACAGTTAGTGCAGTGAAAGATCAGAAAGGTACTGAGGACACCACTGTCATTGATTCAGAAAACATCTCGACAGAAGCAAACAAAGTGTCTGAGGAGCTATTGACGTGCCTACTGAATATCTTCTCACAGATGAGGTCCTCCAGTGACCAAGATGAGGACCGATCATCGTCTCCGTCGGTTTCAGGCTCCTGCGAGAGCTCCGACGGCGCCGCCTGCGCCGGCGACCCCTACGGCGTCCTGGAATTGGGTAGCAGGGACATTGGTCCATACAAGCAATTCAGAGCAGTTGATGCCACTTCATTCGATCAGAATGTTTTTGACAACAGCAACTCCCTTCTTGACAGGAGATTGAAGTGAGTTTCCACTGATCTGGGGGCCTTGCTCCAGAAGCTCTCTTCAGTTGACCTAGTGGGCCTTTCCCATCAGCAGAAGTTAGCATTCTGGATCAACACCTACAATTCCTGCATGATGAATGCTTGTTTATTCTGCAACTCCAGGCATTTCTTGAGCATGGAGCACCTACCACCCCACAAACGCTGGTGGCAATGATGCCCAAGGCGACAATCAACGTGGGTGGGCGCGTGCTGAGCGCCATGACGATCGAGCACTTCATCCTAAGGCTGCCCTACAATGCAAAGCATGTAAGAGTAAGATGCTAGCATCATTGCCGTGTGCCTGAAAACTTATCTGATCGATTTCATGGTACAAAAGATTGACGCCCCGTCGTTCGGGCGTATTTGCAAAAGAAAAAA]

[+] EMBL AK106668             [GGCTTCAAAGCTCAGCAGAGCTTTCTGTGTTCAACAAGTTTTGTACACCTCACTCCTGTTGCTTTCGCGTGCCAATTCGGATGGTTTTCGCTCTGAGTTTTTGAAATGGGCTCCGGGGGATCCATTCCAGTCGAGAGCAGTTCAAATTCGGTGATGGAGAGGCCCAACTCGAAGATTCCGGCGATGAAGGCGTCGTCCTCCAATGCTGCGGCGCCCCAGATGATCATGAACAGGAGCCAATCCAGGAGAGACAGGAAGATTGCACTGCAGCAAGACGTGGACAAGCTGAGGAAGAAGCTGCGGCACGAGGAGAACGTCCACCGAGCTCTGGAGCGCGCCTTCACGAGGCCACTCGGCGCTCTCCCTCGCCTTCCACCTTACCTGCCTTCTCAGACGCTGGAGCTCCTCGCCGAGGTCGCGGTCTTGGAGGAGGAGGTCGTCCGGCTCGAGGAGCAGGTCGTCAGCTTCCGGCAAGGGCTCTACGAGGAGGCTGTCACCATCTCCATGGCGAAGAGCGCGTACTTCTCCGACACCGACCGGTGCACGCCGGCGCGCCATGGCCAAGTTCCCGACCAAGCTGCTAGTGCTAGCTGGTCGTCTCTGAAGCGAGTCACCAATGTCAAGCAGACGCCAAGAAGGACTATTCCTTCCATGAACCATGGAGGTGATCGTCCTGGGAAGGAGAACCAATCGTGTACCACCAACTCTTTCAGAGATCACAGCCGGTTCCCTCTGAAAACCGTGCCAAAATGCAGTAATCCAGAAGAGGAGAAATGTGCCGATTTTCAGACAGTTAGTGCAGTGAAAGATCAGAAAGGTACTGAGGACACCACTGTCATTGATTCAGAAAACATCTCGACAGAAGCAAACAAAGTGTCTGAGGAGCTATTGACGTGCCTACTGAATATCTTCTCACAGATGAGGTCCTCCAGTGACCAAGATGAGGACCGATCATCGTCTCCGTCGGTTTCAGGCTCCTGCGAGAGCTCCGACGGCGCCGCCTGCGCCGGCGACCCCTACGGCGTCCTGGAATTGGGTAGCAGGGACATTGGTCCATACAAGCAATTCAGAGCAGTTGATGCCACTTCATTCGATCAGAATGTTTTTGACAACAGCAACTCCCTTCTTGACAGGAGATTGAAGTGAGTTTCCACTGATCTGGGGGCCTTGCTCCAGAAGCTCTCTTCAGTTGACCTAGTGGGCCTTTCCCATCAGCAGAAGTTAGCATTCTGGATCAACACCTACAATTCCTGCATGATGAATGCTTGTTTATTCTGCAACTCCAGGCATTTCTTGAGCATGGAGCACCTACCACCCCACAAACGCTGGTGGCAATGATGCCCAAGGCGACAATCAACGTGGGTGGGCGCGTGCTGAGCGCCATGACGATCGAGCACTTCATCCTAAGGCTGCCCTACAATGCAAAGCATGTAAGAGTAAGATGCTAGCATCATTGCCGTGTGCCTGAAAACTTATCTGATCGATTTCATGGTACAAAAGATTGACGCCCCGTCGTTCGGGCGTATTTGCAAAAGAAAAAA]


>consensus_4320#1 GGCTTCAAAGCTCAGCAGAGCTTTCTGTGTTCAACAAGTTTTGTACACCTCACTCCTGTT GCTTTCGCGTGCCAATTCGGATGGTTTTCGCTCTGAGTTTTTGAAATGGGCTCCGGGGGA TCCATTCCAGTCGAGAGCAGTTCAAATTCGGTGATGGAGAGGCCCAACTCGAAGATTCCG GCGATGAAGGCGTCGTCCTCCAATGCTGCGGCGCCCCAGATGATCATGAACAGGAGCCAA TCCAGGAGAGACAGGAAGATTGCACTGCAGCAAGACGTGGACAAGCTGAGGAAGAAGCTG CGGCACGAGGAGAACGTCCACCGAGCTCTGGAGCGCGCCTTCACGAGGCCACTCGGCGCT CTCCCTCGCCTTCCACCTTACCTGCCTTCTCAGACGCTGGAGCTCCTCGCCGAGGTCGCG GTCTTGGAGGAGGAGGTCGTCCGGCTCGAGGAGCAGGTCGTCAGCTTCCGGCAAGGGCTC TACGAGGAGGCTGTCACCATCTCCATGGCGAAGAGCGCGTACTTCTCCGACACCGACCGG TGCACGCCGGCGCGCCATGGCCAAGTTCCCGACCAAGCTGCTAGTGCTAGCTGGTCGTCT CTGAAGCGAGTCACCAATGTCAAGCAGACGCCAAGAAGGACTATTCCTTCCATGAACCAT GGAGGTGATCGTCCTGGGAAGGAGAACCAATCGTGTACCACCAACTCTTTCAGAGATCAC AGCCGGTTCCCTCTGAAAACCGTGCCAAAATGCAGTAATCCAGAAGAGGAGAAATGTGCC GATTTTCAGACAGTTAGTGCAGTGAAAGATCAGAAAGGTACTGAGGACACCACTGTCATT GATTCAGAAAACATCTCGACAGAAGCAAACAAAGTGTCTGAGGAGCTATTGACGTGCCTA CTGAATATCTTCTCACAGATGAGGTCCTCCAGTGACCAAGATGAGGACCGATCATCGTCT CCGTCGGTTTCAGGCTCCTGCGAGAGCTCCGACGGCGCCGCCTGCGCCGGCGACCCCTAC GGCGTCCTGGAATTGGGTAGCAGGGACATTGGTCCATACAAGCAATTCAGAGCAGTTGAT GCCACTTCATTCGATCAGAATGTTTTTGACAACAGCAACTCCCTTCTTGACAGGAGATTG AAGTGAGTTTCCACTGATCTGGGGGCCTTGCTCCAGAAGCTCTCTTCAGTTGACCTAGTG GGCCTTTCCCATCAGCAGAAGTTAGCATTCTGGATCAACACCTACAATTCCTGCATGATG AATGCTTGTTTATTCTGCAACTCCAGGCATTTCTTGAGCATGGAGCACCTACCACCCCAC AAACGCTGGTGGCAATGATGCCCAAGGCGACAATCAACGTGGGTGGGCGCGTGCTGAGCG CCATGACGATCGAGCACTTCATCCTAAGGCTGCCCTACAATGCAAAGCATGTAAGAGTAA GATGCTAGCATCATTGCCGTGTGCCTGAAAACTTATCTGATCGATTTCATGGTACAAAAG ATTGACGCCCCGTCGTTCGGGCGTATTTGCAAAAGAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4320#0      ------------------------------GGAATCTGTTGCTT-TGCTTTGCTTCGGTT 29
consensus_4320#1      GGCTTCAAAGCTCAGCAGAGCTTTCTGTGTTCAACAAGTTTTGTACACCTCACTCCTGTT 60
                                                      **   ***   *   * *  ** * ***

consensus_4320#0      AGCTTCTTTCACAGCTAAACAACGCCTTCTTTTTCCTCTTTTGATGATGATACTG----- 84
consensus_4320#1      GCTTTCGCGTGCCAATTCGGATGGTTTTCGCTCTGAGTTTTTGAAATGGGCTCCGGGGGA 120
                         ***     *   *    *  *  ***  * *    ******    *   * *     

consensus_4320#0      -TTGTTTTA--CGTGTTCAGATGA----TGGAGAAGGATCAGAGGAAGGGCGCCATGCCG 137
consensus_4320#1      TCCATTCCAGTCGAGAGCAGTTCAAATTCGGTGATGGAGAGGCCCAACTCGAAGATTCCG 180
                          **  *  ** *  *** * *     ** ** ***   *   **       ** ***

consensus_4320#0      GTGAAGAAGGGATCATCGGCCAACGC---GGTCACCAAAGGCATCACGAACAGAATCCAA 194
consensus_4320#1      GCGATGAAGGCGTCGTCCTCCAATGCTGCGGCGCCCCAGATGATCATGAACAGGAGCCAA 240
                      * ** *****  ** **  **** **   **   ** *    **** ****** * ****

consensus_4320#0      GCGAGGAGAGAGCGGAAGCTCGCACTGCAGCAAGATGTGGACAAGCTGAAGAAGAAGCTG 254
consensus_4320#1      TCCAGGAGAGACAGGAAGATTGCACTGCAGCAAGACGTGGACAAGCTGAGGAAGAAGCTG 300
                       * ********  ***** * ************** ************* **********

consensus_4320#0      AGGCACGAGGAGAACGTCCACCGAGCCCTCGAGAGGGCGTTCACGAGGCCGCTCGGCGCT 314
consensus_4320#1      CGGCACGAGGAGAACGTCCACCGAGCTCTGGAGCGCGCCTTCACGAGGCCACTCGGCGCT 360
                       ************************* ** *** * ** *********** *********

consensus_4320#0      CTGCCTCGCCTGCCGCCGTATCTGCCATCTCAAACACTGGCGCTTCTCGCGGAGGTGGCG 374
consensus_4320#1      CTCCCTCGCCTTCCACCTTACCTGCCTTCTCAGACGCTGGAGCTCCTCGCCGAGGTCGCG 420
                      ** ******** ** ** ** ***** ***** ** **** *** ***** ***** ***

consensus_4320#0      GTGCCGGAAGAAGAGGTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTC 434
consensus_4320#1      GTCTTGGAGGAGGAGGTCGTCCGGCTCGAGGAGCAGGTCGTCAGCTTCCGGCAAGGGCTC 480
                      **   *** ** ********* **************** ****  *********** ***

consensus_4320#0      TACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGA 494
consensus_4320#1      TACGAGGAGGCTGTCACCATCTCCATGGCGAAGAGCGCGTACTTCTCCGACACCGACCGG 540
                      *** *******  * * * *****  *** **** * **  * ** *** *  ***  * 

consensus_4320#0      TGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCA 554
consensus_4320#1      TGCACGCCGGCGCG--CCATG-------GCCAAGTTCCCGAC----------------CA 575
                      ***  ********    ****       ***  ** **  **                **

consensus_4320#0      AATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACG 614
consensus_4320#1      AGCTGCTAGT-----GCTAGCTGGTCGTCTCTGAAGCGAGTCACCAATGTCAAGCAGACG 630
                      *  **  * *      ***   *  * **  ****  * *** **  **  ***** ***

consensus_4320#0      CCGAGAAAGCCTTCTCCTTCGGCGG-CGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAA 673
consensus_4320#1      CCAAGAAGGACTATTCCTTCCATGAACCATGG----AGGTGATCGTCCTGG------GAA 680
                      ** **** * **  ******   *  *  ***    **  ** **  * **      ***

consensus_4320#0      AGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCA 733
consensus_4320#1      GGAGAACCAATCGTGTACCACCAACTCTTTCAGAGATCACAGCCGGTTCCCTCTGA---A 737
                       ******** ***** *  * **   *    *** **    ***  *  ** ***    *

consensus_4320#0      GAAGGCATCAAAATCCAGACTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGC 793
consensus_4320#1      AACCGTGCCAAAATGCAGTAATCCAGAAGAGG---------AGAAATGT---GCCGATTT 785
                       *  *   ****** ***    **   **  *         ***** *    **   *  

consensus_4320#0      TCAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTC 853
consensus_4320#1      TCAGACAGTTAGTGCAGTGAAAGATCAGAAAGGTACTGAGGACACCACTGTCATTGATTC 845
                      ******  ****  *****   ** *  *** *    *  *****      ** * ****

consensus_4320#0      AGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAG 913
consensus_4320#1      AGAAAACATCTCGACAGAAG------------CAAACAAAGTGTCTGAGGAGCTATTGAC 893
                      ******    **   *** *            * **** * **** ***** ** **** 

consensus_4320#0      ATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGA 973
consensus_4320#1      GTGCCTACTGAATATCTTCTCACAGATGAG------GTCCTCCAGTGACCAAGATGAGGA 947
                       ***** **    ******** ****** *       **  * ** * ****** *****

consensus_4320#0      GCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCA---TA 1030
consensus_4320#1      CCGATC---ATCGTCTCCGTCGGTTTCAGGCTCCTGCGAGAGCTCCGACGGCGCCGCCTG 1004
                       *   *   ** ****** *********** ** *********** ** * ***    * 

consensus_4320#0      CCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCG 1090
consensus_4320#1      CGCCGGCGACCCCTACGGCGTCCTGGAATTGGGTAGCAGGGACATTGGTCCATACAAGCA 1064
                      * *    ** ** ** *** * ******** ** *  ** *** ****  ********* 

consensus_4320#0      ATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACGACA---CCAT 1147
consensus_4320#1      ATTCAGAGCAGTTGATGCCACTTCATTCGATCAGAATGTTTTTGACAACAGCAACTCCCT 1124
                      ****   * * * ** ***** ** **********  *   * ** ***  **   ** *

consensus_4320#0      GCTTACCCGGAAACTCAAG---------------------GCTTTGATCCGGAGGCTTTC 1186
consensus_4320#1      TCTTGACAGGAGATTGAAGTGAGTTTCCACTGATCTGGGGGCCTTGCTCCAGAAGCTCTC 1184
                       ***  * *** * * ***                     ** *** *** ** *** **

consensus_4320#0      ATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTA 1246
consensus_4320#1      TTCAGTTGACCTAGTGGGCCTTTCCCATCAGCAGAAGTTAGCATTCTGGATCAACACCTA 1244
                       ** ********   *** ** *************** * **************** ***

consensus_4320#0      CAATTCGTGCATGATGAATGC-----------------------ATTTCTCGAGCAAGGG 1283
consensus_4320#1      CAATTCCTGCATGATGAATGCTTGTTTATTCTGCAACTCCAGGCATTTCTTGAGCATGGA 1304
                      ****** **************                       ****** ***** ** 

consensus_4320#0      ATACCTACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGT 1343
consensus_4320#1      GCACCTACCACCCCACAAACGCTGGTGGCAATGATGCCCAAGGCGACAATCAACGTGGGT 1364
                        ************ ** * *** ************** *********** ** ******

consensus_4320#0      GGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGCGGCTGCCCTACAGCGTG 1403
consensus_4320#1      GGGCGCGTGCTGAGCGCCATGACGATCGAGCACTTCATCCTAAGGCTGCCCTACAATGCA 1424
                      ******  **  ********* ********** ********  ************  *  

consensus_4320#0      AAGCATGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACGTGACGATGCG---A 1460
consensus_4320#1      AAGCATGTAAG----AGTAAGATG-CTAGCATCATTGCCGTGTGCCTGAAAACTTATCTG 1479
                      ******** *      **    ** * *    *   ****    * ***  *        

consensus_4320#0      GGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGC 1520
consensus_4320#1      ATCGATTTCATGGTACAAAAGATTGACGCCCCG---TCGTTCGGGCGTATTTGCAAAAGA 1536
                        **  ***  * *  *   *  ***  *** *    * **** **     ***   ** 

consensus_4320#0      TGGTCCTCCCCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCG 1580
consensus_4320#1      AAAAA------------------------------------------------------- 1541
                                                                                  

consensus_4320#0      GCGAAGAGGGACTACCTGCAGTCGGCGGTGGTGGTGTCGGCGCCGGCGAAGGTGGCGATC 1640
consensus_4320#1      ------------------------------------------------------------
                                                                                  

consensus_4320#0      CCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGAC 1700
consensus_4320#1      ------------------------------------------------------------
                                                                                  

consensus_4320#0      TGGGTGTGCCTCCAGCTACCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGAC 1760
consensus_4320#1      ------------------------------------------------------------
                                                                                  

consensus_4320#0      GGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCATGCAGGTCCTGCCGTACGAATTCAGA 1820
consensus_4320#1      ------------------------------------------------------------
                                                                                  

consensus_4320#0      TTCAGGTACCTGCTGGCCTCATGAAGAGAGGCCAGTGAGTAGCAGCAATCAGCGAGTGAA 1880
consensus_4320#1      ------------------------------------------------------------
                                                                                  

consensus_4320#0      TTCGAGGGTGTTTTACTGCACCTTGTACACAGGCTTCCAATAATTGTGAGTTTTGTTCTT 1940
consensus_4320#1      ------------------------------------------------------------
                                                                                  

consensus_4320#0      CGGTGATGTGAATGAATGAAAGGAAGTATAAAAGG 1975
consensus_4320#1      -----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)