cluster # 4343

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Oryza sativa
cluster # 4343 cluster # 4343 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4343#0 length = 1243 sequences # 3
consensusID : consensus_4343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1243
fasta sequence
                              [TCTCTCTCTCGTTGCCTCCTCGATCTCCTTGAATCGATCAGCGGCAACCAGCCTGATCGTTGTTTGCTAGTTAGTTAATTTCCGTCGCCGATGCCGACGACGCCTCGTCGCAAGGAGCCATGAACCGCTGCACCGACGTCGAGATCAGGAACGCGCTGCGCCTCCTCGCGCCCAAGCCCACCGAGGACATGTCCCGCCTCCACCAGGCCTACGACCGCGGCTAGCTTAGCGAGTAGCTGCTACTAGCGTCCATAATCATTCTGTGTTCCATCGCTCGAGTTCTTGAACACGAAGAGGAGCTTAGTAGTTTGTGTCAGCTGTTAGTTTAGTTTGTGCATAGTTCGCTGCGCGCGGCGACGACGACGATGAAGGAAGGAGGAGGAGGAGGAGGGGAGAGGAGGAACATCCTGGCCAAGACGATCGACAGGTGCCGGTCGTCGCTGGGGCACCGGACAACGAGGCGCCCCGCCTCCGCCGCCGGCGGCGGCGGCTACGGCGGCGCGGCCGTGCCGGCGGGGTTCTTCGCGGTGCTGGTGGGGCCGGAGAAGGAGCGGTTCGCGGTGCGGGCGCGGTGCGCCAACCACCCGCTGTTCCGGGCTCTGCTGGACCAGGCGGAGACGGAGTACGGGTTCGCCGGGTGCGAGGGCCCCCTCGAGCTCCCCTGCGACGTCGACGCCTTCATGGACGTCATGTGGGAGATGGAGCAGGCCGACCCCGCCGCGTCCCCGCGCTGCGGCGCGCGCTTCGGCGGTCCCGCCGCCGCCGGCAGCGGCAGGGGCTACGGGGGCCACGGCCACCACCACCAACACCAGGGGTACCAGATGATGAGCACCCCGGCGAGGCTCCTCGTCGCCGGCCGCTCGTGATCGATGTCTCGGCATCTCTCGCGACGCCGGCCATCGCCGGCGATCTCGTCGTGCCCGTCCTTAGTTAATCAATTTGCTGTCTGCTTGTAAGTACTATAGTAGGCACGTGTTGGGCGCATGCAGAGAGAGGTTTGTTCACCTGCTTGCTTGCTTTGCTATGCTATGACTGTGATAGGGTAGGGGTGTTCAAGTTCAACTGTTCATGTCAACGTTTGTTTCCATGTCGCGTTCGATGTATCTCTGTAATCGTAGTTTTGTATGTGTGAGTGATCTCATGCGTGTTCAACCAACCCCTAAGTCGATAAAAGATCGATGCATGTACATGCATGGTGTTTTGTTCAGTGTTAACTGTGAATCACTATGAATAAAAAGACTAT]

[+] EMBL AK108786             [TCTCTCTCTCGTTGCCTCCTCGATCTCCTTGAATCGATCAGCGGCAACCAGCCTGATCGTTGTTTGCTAGTTAGTTAATTTCCGTCGCCGATGCCGACGACGCCTCGTCGCAAGGAGCCATGAACCGCTGCACCGACGTCGAGATCAGGAACGCGCTGCGCCTCCTCGCGCCCAAGCCCACCGAGGACATGTCCCGCCTCCACCAGGCCTACGACCGCGGCTAGCTTAGCGAGTAGCTGCTACTAGCGTCCATAATCATTCTGTGTTCCATCGCTCGAGTTCTTGAACACGAAGAGGAGCTTAGTAGTTTGTGTCAGCTGTTAGTTTAGTTTGTGCATAGTTCGCTGCGCGCGGCGACGACGACGATGAAGGAAGGAGGAGGAGGAGGAGGGGAGAGGAGGAACATCCTGGCCAAGACGATCGACAGGTGCCGGTCGTCGCTGGGGCACCGGACAACGAGGCGCCCCGCCTCCGCCGCCGGCGGCGGCGGCTACGGCGGCGCGGCCGTGCCGGCGGGGTTCTTCGCGGTGCTGGTGGGGCCGGAGAAGGAGCGGTTCGCGGTGCGGGCGCGGTGCGCCAACCACCCGCTGTTCCGGGCTCTGCTGGACCAGGCGGAGACGGAGTACGGGTTCGCCGGGTGCGAGGGCCCCCTCGAGCTCCCCTGCGACGTCGACGCCTTCATGGACGTCATGTGGGAGATGGAGCAGGCCGACCCCGCCGCGTCCCCGCGCTGCGGCGCGCGCTTCGGCGGTCCCGCCGCCGCCGGCAGCGGCAGGGGCTACGGGGGCCACGGCCACCACCACCAACACCAGGGGTACCAGATGATGAGCACCCCGGCGAGGCTCCTCGTCGCCGGCCGCTCGTGATCGATGTCTCGGCATCTCTCGCGACGCCGGCCATCGCCGGCGATCTCGTCGTGCCCGTCCTTAGTTAATCAATTTGCTGTCTGCTTGTAAGTACTATAGTAGGCACGTGTTGGGCGCATGCAGAGAGAGGTTTGTTCACCTGCTTGCTTGCTTTGCTATGCTATGACTGTGATAGGGTAGGGGTGTTCAAGTTCAACTGTTCATGTCAACGTTTGTTTCCATGTCGCGTTCGATGTATCTCTGTAATCGTAGTTTTGTATGTGTGAGTGATCTCATGCGTGTTCAACCAACCCCTAAGTCGATAAAAGATCGATGCATGTACATGCATGGTGTTTTGTTCAGTGTTAACTGTGAATCACTATGAATAAAAAGACTAT]
[+] EMBL AU184046             [                                                                                                                                                                                                                                                                                                                                                                                                   GAGGGGAGAGGAGGAACATCCTGGCCAAGACGATCGACAGGTGCCGGTCGTCGCTGGGGCACCGGACAACGAGGCGCCCCGCCTCCGCCGCCGGCGGCGGCGGCTACGGCGGCGCGGCCGTGCCGGCGGGGTTCTTCGCGGTGCTGGTGGGGCCGGAGAAGGAGCGGTTCGCGGTGCGGGCGCGGTGCGCCAACCACCCGCTGTTCCGGGCTCTGCTGGACCAGGCGGAGACGGAGTACGGGTTCGCCGGGTGCGAGGGCCCCCTCGAGCTCCCCTGCGACGTCGACGCCTTCATGGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU101615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGGGCTCTGCTGGACCAGCCGAAGACGGAGTACGGGTTCGCCGGGTGCNAGGGCCCCCTCGAGCTCCCCTGCGACGTCGACGCCTTCATGGACGTCATGTGGAAGATGGAGCA GCCGACCCCGCCGCGTCCCCGCGCTGCGGCGCGCGCTTCGGCGGTCCCGCCGCCGCCGGCAGCGGCAGGGGCTACGGGGGCCACGGCCACCACCACCAACACCAGGGGTACCAGATGATGAGCACCCCGGCGAGGCTCCTCGTCGCCGGCCGCTCGTGATCGATGTCTCGGCATCTCTCGCGACGCCGGCCATCGCCGGCGATCTCGTCGTGCCCGTCCTTAGTTAATCAATTTGCTGTCTGCTTGTAAGTACTATAGTAGGCACGTGTTGGGCGCATGCAGAGAGAGGTTTGTTCACCTGCTTGCTTGCTTTGCTATGCTATGACTGTGATAGGGTAGGGGTGTTCAAGTTCAACTGTTCATGTCAACGTTTGTTTCCATGTCGCGTTCGATGTATCTCTGTAATCGTAGTTTTGTATGTGTGAGTGATCTCATGCGTGTTCAACCAACCCCTAAGTCGATAAAAGATCGATGCATGTAaaaaaa                                                  ]




>consensus_4343#0
TCTCTCTCTCGTTGCCTCCTCGATCTCCTTGAATCGATCAGCGGCAACCAGCCTGATCGT
TGTTTGCTAGTTAGTTAATTTCCGTCGCCGATGCCGACGACGCCTCGTCGCAAGGAGCCA
TGAACCGCTGCACCGACGTCGAGATCAGGAACGCGCTGCGCCTCCTCGCGCCCAAGCCCA
CCGAGGACATGTCCCGCCTCCACCAGGCCTACGACCGCGGCTAGCTTAGCGAGTAGCTGC
TACTAGCGTCCATAATCATTCTGTGTTCCATCGCTCGAGTTCTTGAACACGAAGAGGAGC
TTAGTAGTTTGTGTCAGCTGTTAGTTTAGTTTGTGCATAGTTCGCTGCGCGCGGCGACGA
CGACGATGAAGGAAGGAGGAGGAGGAGGAGGGGAGAGGAGGAACATCCTGGCCAAGACGA
TCGACAGGTGCCGGTCGTCGCTGGGGCACCGGACAACGAGGCGCCCCGCCTCCGCCGCCG
GCGGCGGCGGCTACGGCGGCGCGGCCGTGCCGGCGGGGTTCTTCGCGGTGCTGGTGGGGC
CGGAGAAGGAGCGGTTCGCGGTGCGGGCGCGGTGCGCCAACCACCCGCTGTTCCGGGCTC
TGCTGGACCAGGCGGAGACGGAGTACGGGTTCGCCGGGTGCGAGGGCCCCCTCGAGCTCC
CCTGCGACGTCGACGCCTTCATGGACGTCATGTGGGAGATGGAGCAGGCCGACCCCGCCG
CGTCCCCGCGCTGCGGCGCGCGCTTCGGCGGTCCCGCCGCCGCCGGCAGCGGCAGGGGCT
ACGGGGGCCACGGCCACCACCACCAACACCAGGGGTACCAGATGATGAGCACCCCGGCGA
GGCTCCTCGTCGCCGGCCGCTCGTGATCGATGTCTCGGCATCTCTCGCGACGCCGGCCAT
CGCCGGCGATCTCGTCGTGCCCGTCCTTAGTTAATCAATTTGCTGTCTGCTTGTAAGTAC
TATAGTAGGCACGTGTTGGGCGCATGCAGAGAGAGGTTTGTTCACCTGCTTGCTTGCTTT
GCTATGCTATGACTGTGATAGGGTAGGGGTGTTCAAGTTCAACTGTTCATGTCAACGTTT
GTTTCCATGTCGCGTTCGATGTATCTCTGTAATCGTAGTTTTGTATGTGTGAGTGATCTC
ATGCGTGTTCAACCAACCCCTAAGTCGATAAAAGATCGATGCATGTACATGCATGGTGTT
TTGTTCAGTGTTAACTGTGAATCACTATGAATAAAAAGACTAT
clustalw multiple alignements is not computed in this case