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Oryza sativa
cluster # 4344 cluster # 4344       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4344#0 length = 2189 sequences # 2  
consensus_4344#1 length = 1887 sequences # 1  

consensusID : consensus_4344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2189
fasta sequence
                              [CCGCCGAGCTCTGCCGTGGCCATGAAGCAGCATCAGCAGCAGGAGGCTACGGCCTGTTCATCAGAACAGCAGATTGTTCCATGGCTGAAGCACAACAAGAAGTCGCAGCAGCAGCGAAAGGGTACTGGTCTTCTCCCTCCTCGCCGTCGTCGATGTCCCCCACTCCGTCACCTCCACCGGCGGCAGCTGTCCATGGAGGCGGAGGAAGAGCGGAGGAGTCCACCATCGCCGCCGCTGCAACGCCAGCCGCACGGAGTTTGGCTGCAGGGGACAACGGCATGCAGGTGAGTGGCCATGGCGAGCATGCTGGGTTGAGCTCCGGGCGGCGCCGTGGCCGGCAAAAAGGATCCGGGCGGCGCCAGATCCTTGCCAATCTAGGTCAGTACATCGCCGTCCACCCGCGTGCGCACTCGCCATGGCCAGCGGCAGTGGCGCTGGCGCCGGCCTTCCACTCGAAGAGCTAGGGCTTGACGGTGCTGTACTCGACGCGCTCTGGCGATGCGCCGCCGCCGCCGCCCCGCCACCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGAGGAAGCCGTGCGCCGGGATGCCGCCATGCGTCGTCACCGTCGGCGGTGAACCCTGGCGATGCGCCGCTGCCGCCGCCCCGCTGTGGCCGCCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGGAAGAACAGTGTCAAAGGGTTATTTTGGTACTTACACAACTCTTTCTCTCTCCATTTCAACCGAAAATAATAAAATAATGGGAGGAGTGTCCAGCAGCTAATTACCACTTTTTTACAGTGTTCACGAGCAAATACACGTTTTTGGGTGTCTCACAGCAAAGGCCACAATCTTTCGGTGTCCTGTAGCAAATTTTGCCTAAATTAAATTTATGTATCATATACTGCTATCGTTTTTTTCCCCAAGTTGGATTCTTGACTGCTATTCAGATTTGGAAATGTCAACAATCTGCAATTTTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCATTTATGATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATTCGATTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGTTGAGCAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAATGAAATTGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTGAGATGGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAAACTGAATTGCCAAACCATATAAAGATTTTGGCCAAAACCCTTCAGCTTTACATGATTCGCACATTCAGAATGGTTCTTGTTTCAAAACCAACTTTACTCACAGCTTTTCGAGAGGAAGGTGTATGGGACTTAATATTCTCAGAGAATTGTTTCTACTTTGGGTCATCTGTAGAAGACATGCAATTTCATATTGTCGCAGAAGTTCAAAATGAAGATATTAACGGTAATACTGAACCCACTGATTCTGAAAGCTTATACCTATCAGATGTTAACATTCTTCAGTTGGAAGCCATTTCCTTCTTGGAGTATGCTGCAACGCTTAATGAAAACAAATATAACCTGCCAGAATGCTCAGCACTGCTGGAAGCTCTTGAACACTGCATTTATGATCCTGTGGTGGTCAGCATTCTTCTTAAAAGTTTTCGTGTTATTCTACAACTCGCCACAGAACAAACTCTAGTTTCATTTAAATCCTTGGATGTAATTACTGGAGTCCTTAAGGCTGCATGCCAACAAGCAAAAGAACTACAAAACTTCAGCTGTTTTCCTAGTGATGATGTTATCAGCAGTGGATATGGTTCTAAGATAGAAAATATTGAAATGAGTTCGTCAGGAAAGAGAACTGAGTATGCTATTATTTGTATAGAGTTAGCTTTGAGCCTCTTCAAGGAATATGTCACCATATCTAGCTATGGAAGAATTCTAATTTTGCACAATCCTGACTGTATTGAGTGTTTATTCAACTTATTCCAAGAAAAGAACTTCCGCAAGCATGTACTGGAGCAAATTTTTGCTTTATTCAGGGTAAAATTG]

[+] EMBL AK107560             [CCGCCGAGCTCTGCCGTGGCCATGAAGCAGCATCAGCAGCAGGAGGCTACGGCCTGTTCATCAGAACAGCAGATTGTTCCATGGCTGAAGCACAACAAGAAGTCGCAGCAGCAGCGAAAGGGTACTGGTCTTCTCCCTCCTCGCCGTCGTCGATGTCCCCCACTCCGTCACCTCCACCGGCGGCAGCTGTCCATGGAGGCGGAGGAAGAGCGGAGGAGTCCACCATCGCCGCCGCTGCAACGCCAGCCGCACGGAGTTTGGCTGCAGGGGACAACGGCATGCAGGTGAGTGGCCATGGCGAGCATGCTGGGTTGAGCTCCGGGCGGCGCCGTGGCCGGCAAAAAGGATCCGGGCGGCGCCAGATCCTTGCCAATCTAGGTCAGTACATCGCCGTCCACCCGCGTGCGCACTCGCCATGGCCAGCGGCAGTGGCGCTGGCGCCGGCCTTCCACTCGAAGAGCTAGGGCTTGACGGTGCTGTACTCGACGCGCTCTGGCGATGCGCCGCCGCCGCCGCCCCGCCACCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGAGGAAGCCGTGCGCCGGGATGCCGCCATGCGTCGTCACCGTCGGCGGTGAACCCTGGCGATGCGCCGCTGCCGCCGCCCCGCTGTGGCCGCCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGGAAGAACAGTGTCAAAGGGTTATTTTGGTACTTACACAACTCTTTCTCTCTCCATTTCAACCGAAAATAATAAAATAATGGGAGGAGTGTCCAGCAGCTAATTACCACTTTTTTACAGTGTTCACGAGCAAATACACGTTTTTGGGTGTCTCACAGCAAAGGCCACAATCTTTCGGTGTCCTGTAGCAAATTTTGCCTAAATTAAATTTATGTATCATATACTGCTATCGTTTTTTTCCCCAAGTTGGATTCTTGACTGCTATTCAGATTTGGAAATGTCAACAATCTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK101184             [                                                           ATCAGAACAGCAGATTGTTCCATGGCTGAAGCACAACAAGAAGTCGCAGCAGCAGCGAAAGGG ACTGGTCTTCTCCCTCCTCGCCGTCGTCGATGTCCCCCACTCCGTCACCTCCACCGGCGGCAGCTGTCCATGGAGGCGGAGGAAGAGCGGAGGAGTCCACCATCGCCGCCGCTGCAACGCCAGCCGCACGGAGTTTGGCTGCAGGGGACAACGGCATGCAGGTGAGTGGCCATGGCGAGCATGCTGGGTTGAGCTCCGGGCGGCGTCGTGGCCGGCAAAAAGGATCCGGGCGGCGCCAGATCCTTGCCAATCTAGGTCAGTACATCGCCGTCCACCCGCGTGCGCACTCGCCATGGCCAGCGGCAGTGGCGCTGGCGCCGGCCTTCCACTCGAAGAGCTAGGGCTTGACGGTGCTGTACTCGACGCGCTCTGGCGATGCGCCGCCGCCGCCGCCCCGCCACCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGAGGAAGCCGTGCGCCGGGATGCCGCCATGCGTCGTCACCGTCGGCGGTGAACCCTGGCGATGCGCCGCTGCCGCCGCCCCGCTGTGGCCGCCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGGAAGAACAGTGTCAAAGGGTTATTTTGGTACTTACACAACTCTTTCTCTCTCCATTTCAACCGAAAATAATAAAATAATGGGAGGAGTGTCCAGCAGCTAATTACCACTTTTTTACAGTGTTCACGAGCAAATACACGTTTTTGGGTGTCTCACAGCAAAGGCCACAATCTTTCGGTGTCCTGTAGCAAATTTTGCCTAAATTAAATTTATGTATCATATACTGCTATCGTTTTTTTCCCCAAGTTGGATTCTTGACTGCTATTCAGATTTGGAAATGTCAACAATCTGCAATTTTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCATTTATGATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATTCGATTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGTTGAGCAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAATGAAATTGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTGAGATGGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAAACTGAATTGCCAAACCATATAAAGATTTTGGCCAAAACCCTTCAGCTTTACATGATTCGCACATTCAGAATGGTTCTTGTTTCAAAACCAACTTTACTCACAGCTTTTCGAGAGGAAGGTGTATGGGACTTAATATTCTCAGAGAATTGTTTCTACTTTGGGTCATCTGTAGAAGACATGCAATTTCATATTGTCGCAGAAGTTCAAAATGAAGATATTAACGGTAATACTGAACCCACTGATTCTGAAAGCTTATACCTATCAGATGTTAACATTCTTCAGTTGGAAGCCATTTCCTTCTTGGAGTATGCTGCAACGCTTAATGAAAACAAATATAACCTGCCAGAATGCTCAGCACTGCTGGAAGCTCTTGAACACTGCATTTATGATCCTGTGGTGGTCAGCATTCTTCTTAAAAGTTTTCGTGTTATTCTACAACTCGCCACAGAACAAACTCTAGTTTCATTTAAATCCTTGGATGTAATTACTGGAGTCCTTAAGGCTGCATGCCAACAAGCAAAAGAACTACAAAACTTCAGCTGTTTTCCTAGTGATGATGTTATCAGCAGTGGATATGGTTCTAAGATAGAAAATATTGAAATGAGTTCGTCAGGAAAGAGAACTGAGTATGCTATTATTTGTATAGAGTTAGCTTTGAGCCTCTTCAAGGAATATGTCACCATATCTAGCTATGGAAGAATTCTAATTTTGCACAATCCTGACTGTATTGAGTGTTTATTCAACTTATTCCAAGAAAAGAACTTCCGCAAGCATGTACTGGAGCAAATTTTTGCTTTATTCAGGGTAAAATTG]


>consensus_4344#0 CCGCCGAGCTCTGCCGTGGCCATGAAGCAGCATCAGCAGCAGGAGGCTACGGCCTGTTCA TCAGAACAGCAGATTGTTCCATGGCTGAAGCACAACAAGAAGTCGCAGCAGCAGCGAAAG GGTACTGGTCTTCTCCCTCCTCGCCGTCGTCGATGTCCCCCACTCCGTCACCTCCACCGG CGGCAGCTGTCCATGGAGGCGGAGGAAGAGCGGAGGAGTCCACCATCGCCGCCGCTGCAA CGCCAGCCGCACGGAGTTTGGCTGCAGGGGACAACGGCATGCAGGTGAGTGGCCATGGCG AGCATGCTGGGTTGAGCTCCGGGCGGCGCCGTGGCCGGCAAAAAGGATCCGGGCGGCGCC AGATCCTTGCCAATCTAGGTCAGTACATCGCCGTCCACCCGCGTGCGCACTCGCCATGGC CAGCGGCAGTGGCGCTGGCGCCGGCCTTCCACTCGAAGAGCTAGGGCTTGACGGTGCTGT ACTCGACGCGCTCTGGCGATGCGCCGCCGCCGCCGCCCCGCCACCGTCGCGCCTCTGCTC CGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGAGAGAGAGAGGAAGCCGTGCGCCGGGAT GCCGCCATGCGTCGTCACCGTCGGCGGTGAACCCTGGCGATGCGCCGCTGCCGCCGCCCC GCTGTGGCCGCCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAGA GAGAGAGGAAGAACAGTGTCAAAGGGTTATTTTGGTACTTACACAACTCTTTCTCTCTCC ATTTCAACCGAAAATAATAAAATAATGGGAGGAGTGTCCAGCAGCTAATTACCACTTTTT TACAGTGTTCACGAGCAAATACACGTTTTTGGGTGTCTCACAGCAAAGGCCACAATCTTT CGGTGTCCTGTAGCAAATTTTGCCTAAATTAAATTTATGTATCATATACTGCTATCGTTT TTTTCCCCAAGTTGGATTCTTGACTGCTATTCAGATTTGGAAATGTCAACAATCTGCAAT TTTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCATTTA TGATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATTCGA TTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGTTGA GCAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAATGAAA TTGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTGAGAT GGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAAACTG AATTGCCAAACCATATAAAGATTTTGGCCAAAACCCTTCAGCTTTACATGATTCGCACAT TCAGAATGGTTCTTGTTTCAAAACCAACTTTACTCACAGCTTTTCGAGAGGAAGGTGTAT GGGACTTAATATTCTCAGAGAATTGTTTCTACTTTGGGTCATCTGTAGAAGACATGCAAT TTCATATTGTCGCAGAAGTTCAAAATGAAGATATTAACGGTAATACTGAACCCACTGATT CTGAAAGCTTATACCTATCAGATGTTAACATTCTTCAGTTGGAAGCCATTTCCTTCTTGG AGTATGCTGCAACGCTTAATGAAAACAAATATAACCTGCCAGAATGCTCAGCACTGCTGG AAGCTCTTGAACACTGCATTTATGATCCTGTGGTGGTCAGCATTCTTCTTAAAAGTTTTC GTGTTATTCTACAACTCGCCACAGAACAAACTCTAGTTTCATTTAAATCCTTGGATGTAA TTACTGGAGTCCTTAAGGCTGCATGCCAACAAGCAAAAGAACTACAAAACTTCAGCTGTT TTCCTAGTGATGATGTTATCAGCAGTGGATATGGTTCTAAGATAGAAAATATTGAAATGA GTTCGTCAGGAAAGAGAACTGAGTATGCTATTATTTGTATAGAGTTAGCTTTGAGCCTCT TCAAGGAATATGTCACCATATCTAGCTATGGAAGAATTCTAATTTTGCACAATCCTGACT GTATTGAGTGTTTATTCAACTTATTCCAAGAAAAGAACTTCCGCAAGCATGTACTGGAGC AAATTTTTGCTTTATTCAGGGTAAAATTG



consensusID : consensus_4344#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1887
fasta sequence
                              [ACTCTCCTCCCCCACTTCCATTTCGCGGCTAAACATAGGCGATTAGGAGAGCGAGCTCGACGCACGCGCGCAATCACACACCCACGAAAATTTTCGATCCACGCGATTTCCCCATTCGCTCCCGAATCGAGGCCGCATTTTTTTCGATCGAATTTGGGGTTCGGATCGAATAATCCTGTAGGTTTTGCTCACCTCTTCGATCGTCATCTCCGGCGAGCCGGTGGCGGTGGTGATGGTGATGGTGCGTGGCTAGGCGCGCGTGGCGTGGTGGTCGGAGGCCATGAACATCGTGCGGGGCGTCGCCGATCTCCTCCGCAAGGCGCCGGCGCCGCCGCCCGCGCCGCCCGCGGTGCCCTCCTCCTCCTTCGGCGTCCGCGAGGGCTCCTTCCATGGTGCCGACCAGGACGTCGCTCCCTCTCCCCGCGTCGTCTTCAGTGATAGCACGGAGGAGAGAGTCTTAAATACACTATGGAAGAAGTATGAGAATGCCCTCAATAAGGCTGAAAAGGAGAAATCCCTGCAAATTTTTGTCTTACAATTTGTACAAACATTCAGAGATTGGGGACCATACCATAATATTCATTTGGTTGATCAAGAACAAGGATCTGATGAAACAGTTGTAGGATGCTCTCACGGGCATCCTTCTGAGGTCATTCTTATCCTGATTCAGGAGATGTCTATAATAACATCAACTATTGCAGAAATAGGTGGCAACAGTCCAGAATCTTCTCCGAACTATTCAGAGCAACCAGGAGATCTGGGATTAAGTACTGAACGGCTACATGTTTTGGAGTGCTTGACAATTTTGACTCGTTCCATGCATAACTGTAGAGTATTTAGCTATTATGGTGGTGTAAAGAAGGTTACTTCTCTACTAAAAGCTGCAGTTGCTCAGCTCAAAATCCAGAACAGTTTGCTTGCTGCAGATAACCACGTCTCATGCCAAGCTGTAGAAAATATAAAAATGATGCTAAATATGCTCAAATACATAGTTACAATAATTTCCAACTTCATGAAATTGGAGCCAACTATCCTGAGGATTCCCCATTTTCTCAATTCCACTAAGTGTGCCTCATCAAAAAATCATTTGGCCACAGTTACTCCAAGCACTTCAGAAAGTGGTATTTTTGATACACTTCAACGTTGGCAACAAAGGGCTATTGTTCTTGTGATGGGAGCTGGTGGTGTCAATTCGTTAGTAGAACTTTTGCGGGTCATTCAGAGACTGAATTCGGAGCAGTGGACAGATCTTTCACTTCATTTTATCACATTATGCACTTTGCGATCAACTATATCTGGAACCCGTGCCCAGAATCATGTTAGAAGCATTGGTGGTTTGGAAATTCTACTTGATGGGCTAGGACTCCCTTCAAGTAAATTTTCAGTTTTGAAGAATTCATCTATCCCAAAAGATGAAAGGGTTGAAGTTCTTCTGCTCCAAATATTATATTTGGAAATTCTAAGTGAGGCAGTATTTGGAAATGTCAACAATCTGCAATTTTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCATTTATGATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATTCGATTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGTTGAGCAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAATGAAATTGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTGAGATGGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAAACTGAATTGCCAAACCATATAAAGTAAGTTTG]

[+] EMBL AK109845             [ACTCTCCTCCCCCACTTCCATTTCGCGGCTAAACATAGGCGATTAGGAGAGCGAGCTCGACGCACGCGCGCAATCACACACCCACGAAAATTTTCGATCCACGCGATTTCCCCATTCGCTCCCGAATCGAGGCCGCATTTTTTTCGATCGAATTTGGGGTTCGGATCGAATAATCCTGTAGGTTTTGCTCACCTCTTCGATCGTCATCTCCGGCGAGCCGGTGGCGGTGGTGATGGTGATGGTGCGTGGCTAGGCGCGCGTGGCGTGGTGGTCGGAGGCCATGAACATCGTGCGGGGCGTCGCCGATCTCCTCCGCAAGGCGCCGGCGCCGCCGCCCGCGCCGCCCGCGGTGCCCTCCTCCTCCTTCGGCGTCCGCGAGGGCTCCTTCCATGGTGCCGACCAGGACGTCGCTCCCTCTCCCCGCGTCGTCTTCAGTGATAGCACGGAGGAGAGAGTCTTAAATACACTATGGAAGAAGTATGAGAATGCCCTCAATAAGGCTGAAAAGGAGAAATCCCTGCAAATTTTTGTCTTACAATTTGTACAAACATTCAGAGATTGGGGACCATACCATAATATTCATTTGGTTGATCAAGAACAAGGATCTGATGAAACAGTTGTAGGATGCTCTCACGGGCATCCTTCTGAGGTCATTCTTATCCTGATTCAGGAGATGTCTATAATAACATCAACTATTGCAGAAATAGGTGGCAACAGTCCAGAATCTTCTCCGAACTATTCAGAGCAACCAGGAGATCTGGGATTAAGTACTGAACGGCTACATGTTTTGGAGTGCTTGACAATTTTGACTCGTTCCATGCATAACTGTAGAGTATTTAGCTATTATGGTGGTGTAAAGAAGGTTACTTCTCTACTAAAAGCTGCAGTTGCTCAGCTCAAAATCCAGAACAGTTTGCTTGCTGCAGATAACCACGTCTCATGCCAAGCTGTAGAAAATATAAAAATGATGCTAAATATGCTCAAATACATAGTTACAATAATTTCCAACTTCATGAAATTGGAGCCAACTATCCTGAGGATTCCCCATTTTCTCAATTCCACTAAGTGTGCCTCATCAAAAAATCATTTGGCCACAGTTACTCCAAGCACTTCAGAAAGTGGTATTTTTGATACACTTCAACGTTGGCAACAAAGGGCTATTGTTCTTGTGATGGGAGCTGGTGGTGTCAATTCGTTAGTAGAACTTTTGCGGGTCATTCAGAGACTGAATTCGGAGCAGTGGACAGATCTTTCACTTCATTTTATCACATTATGCACTTTGCGATCAACTATATCTGGAACCCGTGCCCAGAATCATGTTAGAAGCATTGGTGGTTTGGAAATTCTACTTGATGGGCTAGGACTCCCTTCAAGTAAATTTTCAGTTTTGAAGAATTCATCTATCCCAAAAGATGAAAGGGTTGAAGTTCTTCTGCTCCAAATATTATATTTGGAAATTCTAAGTGAGGCAGTATTTGGAAATGTCAACAATCTGCAATTTTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCATTTATGATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATTCGATTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGTTGAGCAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAATGAAATTGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTGAGATGGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAAACTGAATTGCCAAACCATATAAAGTAAGTTTG]


>consensus_4344#1 ACTCTCCTCCCCCACTTCCATTTCGCGGCTAAACATAGGCGATTAGGAGAGCGAGCTCGA CGCACGCGCGCAATCACACACCCACGAAAATTTTCGATCCACGCGATTTCCCCATTCGCT CCCGAATCGAGGCCGCATTTTTTTCGATCGAATTTGGGGTTCGGATCGAATAATCCTGTA GGTTTTGCTCACCTCTTCGATCGTCATCTCCGGCGAGCCGGTGGCGGTGGTGATGGTGAT GGTGCGTGGCTAGGCGCGCGTGGCGTGGTGGTCGGAGGCCATGAACATCGTGCGGGGCGT CGCCGATCTCCTCCGCAAGGCGCCGGCGCCGCCGCCCGCGCCGCCCGCGGTGCCCTCCTC CTCCTTCGGCGTCCGCGAGGGCTCCTTCCATGGTGCCGACCAGGACGTCGCTCCCTCTCC CCGCGTCGTCTTCAGTGATAGCACGGAGGAGAGAGTCTTAAATACACTATGGAAGAAGTA TGAGAATGCCCTCAATAAGGCTGAAAAGGAGAAATCCCTGCAAATTTTTGTCTTACAATT TGTACAAACATTCAGAGATTGGGGACCATACCATAATATTCATTTGGTTGATCAAGAACA AGGATCTGATGAAACAGTTGTAGGATGCTCTCACGGGCATCCTTCTGAGGTCATTCTTAT CCTGATTCAGGAGATGTCTATAATAACATCAACTATTGCAGAAATAGGTGGCAACAGTCC AGAATCTTCTCCGAACTATTCAGAGCAACCAGGAGATCTGGGATTAAGTACTGAACGGCT ACATGTTTTGGAGTGCTTGACAATTTTGACTCGTTCCATGCATAACTGTAGAGTATTTAG CTATTATGGTGGTGTAAAGAAGGTTACTTCTCTACTAAAAGCTGCAGTTGCTCAGCTCAA AATCCAGAACAGTTTGCTTGCTGCAGATAACCACGTCTCATGCCAAGCTGTAGAAAATAT AAAAATGATGCTAAATATGCTCAAATACATAGTTACAATAATTTCCAACTTCATGAAATT GGAGCCAACTATCCTGAGGATTCCCCATTTTCTCAATTCCACTAAGTGTGCCTCATCAAA AAATCATTTGGCCACAGTTACTCCAAGCACTTCAGAAAGTGGTATTTTTGATACACTTCA ACGTTGGCAACAAAGGGCTATTGTTCTTGTGATGGGAGCTGGTGGTGTCAATTCGTTAGT AGAACTTTTGCGGGTCATTCAGAGACTGAATTCGGAGCAGTGGACAGATCTTTCACTTCA TTTTATCACATTATGCACTTTGCGATCAACTATATCTGGAACCCGTGCCCAGAATCATGT TAGAAGCATTGGTGGTTTGGAAATTCTACTTGATGGGCTAGGACTCCCTTCAAGTAAATT TTCAGTTTTGAAGAATTCATCTATCCCAAAAGATGAAAGGGTTGAAGTTCTTCTGCTCCA AATATTATATTTGGAAATTCTAAGTGAGGCAGTATTTGGAAATGTCAACAATCTGCAATT TTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCATTTAT GATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATTCGAT TTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGTTGAG CAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAATGAAAT TGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTGAGATG GTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAAACTGA ATTGCCAAACCATATAAAGTAAGTTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4344#0      CCGCCGAGCTCTGCCGTGGCCATGAAGCAGCATCAGCAGCAGGAGGCTACGGCCTGTTCA 60
consensus_4344#1      ------------------ACTCTCCTCCCCCACTTCCATTTCGCGGCTAAACATAGGCGA 42
                                         *  *    *  **    **    * *****      *   *

consensus_4344#0      TCAGAACAGCAGATTGTTCCATGGCTGAAGCACAACAAGAAGTCGCAGCAGCAGCGAAAG 120
consensus_4344#1      TTAGGAGAGCGAGCT----------CGACGCACG-CGCGCAATCACA-CACCCACGAAAA 90
                      * ** * ***    *           ** ****  *  * * ** ** ** *  ***** 

consensus_4344#0      GGTACTGGTCTTCTCCCTCCTCGCCGTCGTCGATGTCCCCCACTCCGTCACCTCCACCGG 180
consensus_4344#1      ----------TTTTCGATCCACGCGAT--------TTCCCCATTCGCTC---CCGAATCG 129
                                ** **  *** ***  *        * ***** **  **    * *   *

consensus_4344#0      CGGCAGCTGTCCATGGAGGCGGAGGAAGAGCGGAGGAGTCCACCATCGCCGCCGCTGCAA 240
consensus_4344#1      AGGCCGCATTTTTTTCGATCGAATTTGGGGTTCGGA--TCGAATAATCCTGTAGGTTTTG 187
                       *** **  *   *     ** *    * *    *   ** *  *   * *  * *    

consensus_4344#0      CGCCAGCCGCACGGAGTTTGGCTGCAGGGGACAACGGCATGCAGGTGAGTGGCCATGGCG 300
consensus_4344#1      C-TCACCTCTTCGATCGTCATCTCCGGCGAGC--CGGT-----GGCG-GTGGTGATGGTG 238
                      *  ** *    **    *   ** * * *  *  ***      ** * ****  **** *

consensus_4344#0      AGCATGCTGGGTTGAGCTCCGGGCGGCGCCGTGGCCGGCAAAAAGGATCCGGGCGGCGCC 360
consensus_4344#1      ATGGTGCGTGGCTAGGCGC-GCGTGGCGTGGTGGTCGG------------AGGCCATG-- 283
                      *   ***  ** *  ** * * * ****  **** ***             ***   *  

consensus_4344#0      AGATCCTTGCCAATCTAGGTCAGTACATCGCCGTCCACCCGCGTGCGCACTCGCCATGGC 420
consensus_4344#1      -----------AACATCGTGCGGGGCGTCGCCGATCTCCTCCGCAAG---GCGCCGGCGC 329
                                 **  * *  * *  * ******  * **  **   *    ****   **

consensus_4344#0      CAGCGGCAGTGGCGCTGGCGCCGGCCTTCCACTCGAAGAGCTAGGGCTTGACGGTGCTGT 480
consensus_4344#1      CGCCGCCCGCGCCGCCCGCGGTGCCCTCCTCCTCCTTCGGC--GTCCGCGAGGGCTCCTT 387
                      *  ** * * * ***  ***  * *** *  ***     **  *  *  ** **  *  *

consensus_4344#0      ACTCGACGCGCTCTGGCGATGCGCCGCCGCCGCCGCCCCGCCACCGTCGCGCCTCTGCTC 540
consensus_4344#1      CCATGGTGC---CGACCAGGACGTCGCT-CCCTCTCCCCG----CGTCGT-CTTCAGTGA 438
                       *  *  **   *   *    ** ***  **  * *****    *****  * ** *   

consensus_4344#0      CGCTGCGAGGAAGAAGGGGA-AAAGAAAAGAAGAGAGAGAGAGGAAGCCGTGCGCCGGGA 599
consensus_4344#1      TAGCACGGAGGAGAGAGTCTTAAATACACTATGGAAGAAGTATGAGAATGCCCTCAATAA 498
                           **  * ***  *    *** * *  * *  ***   * **    *  * *    *

consensus_4344#0      TGCCGCCATGCGTCGTCACCGTCGGCGGTGAACCCTGGCGATGCGCCGCTGCCGCCGCCC 659
consensus_4344#1      GGCTGAAAAGGAGAAATCCCTGCAAATTTTTGTCTTA-CAATTTG----TACAAACATTC 553
                       ** *  * *        **  *     *    * *  * **  *    * *   *   *

consensus_4344#0      CGCTGTGGCCGCCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAG 719
consensus_4344#1      AGAGATTGGGGAC--CATACCATAATATTCATTTGGTTGATCAAGAACAAGGATCTGATG 611
                       *   * *  * *  *   **          *  *    *  * *   ** **   ** *

consensus_4344#0      AGAGAGAGGAAGAACAGTGTCAAAGGGTTATTTTGGTACTTACACAACTCTTTCTCTCTC 779
consensus_4344#1      AAACAGTTGTAGGATGCTCTCACGGGCATCCTTCTGAGGTCATTC---TTATCCTGATTC 668
                      * * **  * ** *   * ***  **  *  **  *   * *  *   *  * **   **

consensus_4344#0      CATTTCAACCGAAAATAATAA-AATAATGGGAGGAGTGTCCAGCAGCTAATTACCA-CTT 837
consensus_4344#1      AGGAGATGTCTATAATAACATCAACTATTGCAGAAATAGGTGGCAACAGTCCAGAATCTT 728
                               * * ***** *  **  ** * ** * *     *** *     *  * ***

consensus_4344#0      TTTTACAGTGTTCACGAGCAAATACACGTTTTTGGGTGTCTCACAGCAAAGGCCACAATC 897
consensus_4344#1      CTCCGAACTATTCA-GAGCAACCAGGAGATCTGGGATTAAGTACTG-AACGGCTACA-TG 785
                       *    * * **** ******  *   * * * ** *     ** * ** *** *** * 

consensus_4344#0      TTTCGGTGTCCTGTAGCAAATTTTGCCTAAATTAAATTTATGTATCATATACTGCTATCG 957
consensus_4344#1      TTTTGGAGTGCT-TGACAA-TTTTGACT------------CGTTCCATGCATAACT---- 827
                      *** ** ** ** *  *** ***** **             **  ***  *   **    

consensus_4344#0      TTTTTTTCCCCAAGTTGGATTCTTGACTGCTATTCAGATTTGGAAATGTCAACAATCTGC 1017
consensus_4344#1      -------------GTAGAGTATTTAGCTATTAT--------GGTGGTGTAAAGAAG--GT 864
                                   ** *  *  **  **  ***        **   *** ** **   * 

consensus_4344#0      AATTTTTGTGCGAAAATGGACGTGTACACAAATTTGCAAACTGCATTTGTTGGCCTGCAT 1077
consensus_4344#1      TACTTCTCTACTAAAAGCTGCAGTTGCTCAG-CTCAAAATCCAGAACAGTTTGCTTGC-- 921
                       * ** * * * ****    *   * * **   *   ** *   *   *** ** ***  

consensus_4344#0      TTATGATTCTGGAGTTCCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCATTAGATT 1137
consensus_4344#1      TGCAGATAACCACGTCTCAT--GCCAAGCTGTAGAAA---------ATATAAAAATGATG 970
                      *   ***      **  ***  ** ***   **  *          *  *  *   *** 

consensus_4344#0      CGATTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAAAGT 1197
consensus_4344#1      CTAAATATGCTCAAATACATAGTTACAATAATTTCCAA-----------CTTCATGAAAT 1019
                      * *  * **  * ***  **  *    ***    * **           **   * ** *

consensus_4344#0      TG-AGCAATGCACTTTGCTCTTTTATTATTCCTTCAAAGGTTATAAGTTACTGTCGTAAT 1256
consensus_4344#1      TGGAGCCAACTATCCTGAGGATTCCCCATTTTCTCAATTCCACTAAGTGTGCCTCATCAA 1079
                      ** *** *   *   **    **    ***   ****      *****     ** * * 

consensus_4344#0      GAAATTGCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCAATCTGTG 1316
consensus_4344#1      AAAATCATTTG-GCCACAGTTACTCCA---AGCACTTCAGAA-----AGTGGTATTTTTG 1130
                       ****   ***   ** * *  **  *   * * * **** *     ** *  ** * **

consensus_4344#0      AGATGGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCATCAAAGCTTGTACTAGTGAA 1376
consensus_4344#1      ATACACTTCA---ACGTTGGCAACAAAGGGCTATTGTTC-TTGTGATGGGAGCTGGTGGT 1186
                      * *   ****     ***   *  * **   *  * * * *        *  ** ***  

consensus_4344#0      ACTGAATTGCCAAACCATATAAAGATTTTGGCCAAAACCCTTCAGCTTTACATGATTCGC 1436
consensus_4344#1      GTCAATTCGTTAG------TAGAACTTTTG---CGGGTCATTCAGA--GACTGAATTCGG 1235
                          * * *  *       ** *  *****        * *****    **   ***** 

consensus_4344#0      ACATTCAGAATGGTTCTTGTTTCAAAACCAACTTTACTCACAGCTTTTCGAGAGGAAGGT 1496
consensus_4344#1      A-GCAGTGGACAGATCTTTCACTTCATTTTATCACATTATGCACTTTGCGATCA-ACTAT 1293
                      *      * *  * ****       *    *    * *     **** ***    *   *

consensus_4344#0      GTATGGGACTTAATATTCTCAGAGAATTGTTTCTACTTTGGGTCATCTGTAGAAGACATG 1556
consensus_4344#1      ATCTGGAACCCG---TGCCCAGAATCATGTTAGAAGCATTGGTGGTTTG-----GAAATT 1345
                       * *** **      * * ****    ****   *   * ***  * **     ** ** 

consensus_4344#0      CAATTTCATATTGTCGCAGAAGTTCAAAATGAAGATATTAACGGTAATACTGAACCCACT 1616
consensus_4344#1      CTACTTGATGG----GCTAGGACTCCCTTCAAGTAAATTTTCAGTTTTGAAGAATTCATC 1401
                      * * ** **      **      **      *  * ***  * **  *   ***  **  

consensus_4344#0      GATTCTGAAAGCTTATACCTATCAGATGTTAACATTCTTCAGTTGGAAGCCATTTCCTTC 1676
consensus_4344#1      TATCCCAAAAGATGA--------AAGGGTTGAAGTTCTTCTGCTCCAAAT-ATTATATTT 1452
                       ** *  **** * *        *   *** *  ****** * *  **   ***   ** 

consensus_4344#0      TTGGAGTATGC-TGCAACGCTTAATGAAAACAAATATAACCTGCCAGAATGCTCAGCACT 1735
consensus_4344#1      GGAAATTCTAAGTGAGGCAGTATTTGGAAATGTCAACAATCTGC--AATTTTTGTGCGAA 1510
                          * * *   **   *  *   ** ***     * ** ****   * *  *  **   

consensus_4344#0      GCTGGAAGCTCTTGAACACTGCATTTATGATCCTGTGGTGGTCAGCATTCTTCTTAAAAG 1795
consensus_4344#1      AATGGACG----TGTACAC-AAATTTGCAAAC-TGCATTTGTTGGCCTGCATTT--ATGA 1562
                        **** *    ** ****   ****   * * **   * **  ** * * * *  *   

consensus_4344#0      TTTTCGTGTTATTCTACAACTCGCCACAGAACAAACTCTAGT-TTCATTTAAATCCTTGG 1854
consensus_4344#1      TTCTGGAGTT------CCATCGGCAAAGGGATAACACCGGGCCTTCACTTGCA---TTAG 1613
                      ** * * ***      * *   ** *  * * **   *  *  **** **  *   ** *

consensus_4344#0      ATGTAATTACTGGAGTCCTTAAGGCTGC--ATGCCAACAAGCAAAAGAACTACA----AA 1908
consensus_4344#1      ATTCGATTTCTGGCCCAATTTATTTTCTTGATATAACCGAATGGAGGGAGTACTCTGTAA 1673
                      **   *** ****     ** *   *    **   * * *    * * * ***     **

consensus_4344#0      ACTTCAGCTGTTTTCCTAGTGATGATGTTATCAGCAGTGGATATGGTTCTAAGATAGAAA 1968
consensus_4344#1      AGTTGAGCAATGCACTTTGCTCTTTTATTATTC-CTTCAAA---GGTTATAAGTTACTGT 1729
                      * ** ***  *   * * *   *  * ****   *     *   **** **** **    

consensus_4344#0      -ATATTGAAATGAGTTCGTCAGGAAAGAGAACTGAGTATGCTATTATT-TGTATAGAGTT 2026
consensus_4344#1      CGTAATGAAATT-GCTTGCAACAAAATCTCTTTATCTATCCCATCAGCATACCGAGAGCA 1788
                        ** ******  * * *  *  ***      *   *** * ** *   *    ****  

consensus_4344#0      AGCTTTGAGCCTCTTCAAGGAATATGTCACCATA-TCTAGCTATGGAAGAATTCTAATTT 2085
consensus_4344#1      ATCTGTGAGATGGTTCATAAGGGTTCTTATGACAGTCTTCCTATGCA-----TCAAAGCT 1843
                      * ** ****    ****       * * *  * * ***  ***** *     ** **  *

consensus_4344#0      TGCACAATCCTGACTGTATTGAGTGTTTATTCAACTTATTCCAAGAAAAGAACTTCCGCA 2145
consensus_4344#1      TGTACTAGTGAAACTGAATTGCCAAACCATATAAAGTAAGTTTG---------------- 1887
                      ** ** *     **** ****       **  **  **                      

consensus_4344#0      AGCATGTACTGGAGCAAATTTTTGCTTTATTCAGGGTAAAATTG 2189
consensus_4344#1      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)