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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4349 cluster # 4349       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4349#0 length = 447 sequences # 3  

consensusID : consensus_4349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 447
fasta sequence
                              [NTAGTATGCTGATAGATGTGAAGGAGAATTTTGATTCTGCAAAAGTGGTGGAAGAAGAAAAGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAACAAGCGCTCACGAGAGAATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTAACGAGGCGTATTGAAGAGCTTGAATTGGAAAAGGAGAAATTGGTAAAGGGCGTGACAGAAGCAGAAAACAAGCAGAACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCTGATAAAGATAAGGAGCTGGC-TGA-TGCAACTCAGTCACTGAAGGAGC-TGGGTTC-TGAGCTTGAGAGCT-CAAAGGAGAGGATTCAAG-AATTGAAGCTGAATTAGCTGCGTCCGCTGACAAGCTCCACAAACTTGAAGAGCTCAAGGATGAAAGAAGCTTGCATGC]

[+] EMBL OSS4353A             [NTAGTATGCTGATAGATGTGAAGGAGAATTTTGATTCTGCAAAAGTGGTGGAAGAAGAAAAGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAACAAGCGCTCACGAGAGAATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTAACGAGGCGTATTGAAGAGCTTGAATTGGAAAAGGAGAAATTNGTAAAGGGCGTGACAGAAGCAGANAACAAGCAGAACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCTGATAAAGATAAGGAGCTGGC TGA TGCAACTCAGNCACTGAAGGAGC TGGGTTC TGAGCTTGAGAGCT CAAAGGAGAGGATTCAAG AATTGAA                                                                       ]
[+] EMBL OSS4345A             [ gtngnaGCTGATAGATGTGAAGGAGAATTTTGATTCTGCAAAAGTGGTGGAAGAAGAAAAGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAACAAGCGCTCACGAGAGAATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTAACGAGGCGTATTGAAGAGCTTGAATTGGAAAAGGAGAAATTGGTAAAGGGCGTGACAGAAGCAGAAAACAAGCAGAACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCTGATAAAGATAAGGAGCTGGCTTGATTGCAACTCAGTCACTTGAGGAGCTTGGGTTCTTGAGCTTGAGAGCTCCAAAGGAG                                                                                         ]
[+] EMBL AU222980             [             AGATGTGAAGGAGAATTTTGATTCTGCAAAAGTGGTGGAAGAAGAAAAGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAACAAGCGCTCACGAGAGAATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTAACGAGGCGTATTGAAGAGCTTGAATTGGAAAAGGAGAAATTGGTAAAGGGCGTGACAGAAGCAGAAAACAAGCAGAACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCTGATAAAGATAAGGAGCTGGC TGA TGCAACTCAGTCACTGAAGGAGC TGGGTTC TGAGCTTGAGAGCT CAAAGGAGAGGATTCAAGAAATTGAAGCTGAATTAGCTGCGTCCGCTGACAAGCTCCACAAACTTGAAGAGCTCAAGGATGAAAGAAGCTTGCATGC]


>consensus_4349#0 NTAGTATGCTGATAGATGTGAAGGAGAATTTTGATTCTGCAAAAGTGGTGGAAGAAGAAA AGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAACAAGCGCTCACGAGAG AATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTAACGAGGCGTATTGAAG AGCTTGAATTGGAAAAGGAGAAATTGGTAAAGGGCGTGACAGAAGCAGAAAACAAGCAGA ACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCTGATAAAGATAAGGAGC TGGCTGATGCAACTCAGTCACTGAAGGAGCTGGGTTCTGAGCTTGAGAGCTCAAAGGAGA GGATTCAAGAATTGAAGCTGAATTAGCTGCGTCCGCTGACAAGCTCCACAAACTTGAAGA GCTCAAGGATGAAAGAAGCTTGCATGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)