cluster # 4361

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Oryza sativa
cluster # 4361 cluster # 4361 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4361#0 length = 890 sequences # 3

consensusID : consensus_4361#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 890
fasta sequence

                              [CACCGCCGCCGCCGCCGTCCTCCATGGCCGACGACCGAGTAGCCGGCGGCGCAACCCCGCCGCCACCTCCTCCTCCCCCTCCTCTCGACGCCTCCGCGTTCACGCACACCCCGTACTACTGTGAAGAAAATGTTCACTTGCTATGTAAGGAACTCATTAGAAGTGGAATTTCTGATCCTGCTGGCACCAACTTATATGCTGTTTTCATATCAAATGAGGAAAAGAAGGTTCCTCTCTGGTATCAGAAAGCAAGTCATAGCGGTGATGGTTTTGTCCTGTGGGATTATCATGTAATTTGTATCCAGTCTAGGCGAAAAAATGGAGAAGTACTTGATCTTGTTTGGGATTTGGACTCCAGCCTTCCTTTCCCATGTTCATTCATCCAGTACGTTTCTGATGCCATACGACCATTATCATTTGGCAACTCTACCTACAGGAGGCTTTTCCGTGTGATTCATGCTCCTGTATTTCTTCGATCATTTGCATCTGATAGAAGCCACATGAAGGATCATGCAGGGAATTGGATTCAGTTGCCCCCAAAGTATGAATCAATTGTTGCAGAAGATGGAACCACCAATAATCTGAATGAGTACATTACGATGTCTATGGATGATGTGAAGGACCTGGAAAGTATGGCTGATGATGTCTACTCCAGCAAACATGGTGTGGTGATAAATGAAACTATCCTGCCTGAATTCTTCTCTCGCTT-GCCTGGA-TGACTCAACAGGAGCTATCTATCCCGATTCATGAAGCTATT-TTGTTGTCCAATGAGATTTATGAACCAAGTCCAGAGTTA-AAATGATGTTGTCCAAGCAATTGTTAACACAATGTTTACACAGTTTTGCTTGCTGAGTAAATCACACTTGCGATGATCAAAAAAAAAAAAAAAA]

[+] EMBL AK062285             [CACCGCCGCCGCCGCCGTCCTCCATGGCCGACGACCGAGTAGCCGGCGGCGCAACCCCGCCGCCACCTCCTCCTCCCCCTCCTCTCGACGCCTCCGCGTTCACGCACACCCCGTACTACTGTGAAGAAAATGTTCACTTGCTATGTAAGGAACTCATTAGAAGTGGAATTTCTGATCCTGCTGGCACCAACTTATATGCTGTTTTCATATCAAATGAGGAAAAGAAGGTTCCTCTCTGGTATCAGAAAGCAAGTCATAGCGGTGATGGTTTTGTCCTGTGGGATTATCATGTAATTTGTATCCAGTCTAGGCGAAAAAATGGAGAAGTACTTGATCTTGTTTGGGATTTGGACTCCAGCCTTCCTTTCCCATGTTCATTCATCCAGTACGTTTCTGATGCCATACGACCATTATCATTTGGCAACTCTACCTACAGGAGGCTTTTCCGTGTGATTCATGCTCCTGTATTTCTTCGATCATTTGCATCTGATAGAAGCCACATGAAGGATCATGCAGGGAATTGGATTCAGTTGCCCCCAAAGTATGAATCAATTGTTGCAGAAGATGGAACCACCAATAATCTGAATGAGTACATTACGATGTCTATGGATGATGTGAAGGACCTGGAAAGTATGGCTGATGATGTCTACTCCAGCAAACATGGTGTGGTGATAAATGAAACTATCCTGCCTGAATTCTTCTCTCGCTT GCCTGGA TGACTCAACAGGAGCTATCTATCCCGATTCATGAAGCTATT TTGTTGTCCAATGAGATTTATGAACCAAGTCCAGAGTTA AAATGATGTTGTCCAAGCAATTGTTAACACAATGTTTACACAGTTTTGCTTGCTGAGTAAATCAC                             ]
[-] EMBL CA763656             [                                                                                                                                                                                                                               gggGGTTCCTCTCTGGTATCAGAAAGCAAGTCATAGCGGTGATGGTTTTGTCCTGTGGGATTATCATGTAATTGGTATCCAGTCTAGGCGAAAAAATGGAGAAGTACTTGATCTTGTTTGGGATTTGGACTCCAGCCTTCCTTTCCCATGTTCATTCATCCAGTACGTTTCTGATGCCATACGACCATTATCATTTGGCAACTCTACCTATAGGAGGCTTTTCCGTGTGATTCATGCTCCTGTATTTCTTCGATCATTTGCATTTGATAGAAGCCACATGAAGGATCATGCAGGGAATTGGATTCAGTTGCCCCCAAAGTATGAATCAATTGTTGCAGAAGATGGAACCACCAATAATTTGAATGAGTACATTACGATGTCTATGGATGATGTGAAGGACCTGGAAAGTATGGCTGATGATGTCTACTCCAGCAAACATGGTGTGGTGATAAATGAAACTATGGGGGCTGAATTCTTCTCTCGCTT GCCTGGA TGACTCAACAGGAGCTATCTATCCCGATTCATGAAGCTATT TTGTTGTCCAATGAGATTTATGAACCAAGTCCAGAGTTA AAATGATGTTGTCCAAGCAATTGTTAACACAATGTTTACACAGTTTTGCTTGCTGAGTAAATCACACTTGCGATGATCAAAAAAAAAAAAAAAA]
[+] EMBL BI813509             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAATTCTTCTCTCGCTTGGCCTGGACTGACTCAACAGGAGCTATCTATCCCGATTCATGAAGCTATTGTTGTTGTCCTATGAGATTTATGAACCAAGTCCAGAGTTATAAATGATGTTGTCCAAGC ATTGTTAACACAATGTTTACACAGTTTTGCTTGCTGAGTAAATCACACTTGCGATGATCAAAAAAAAAA      ]




>consensus_4361#0
CACCGCCGCCGCCGCCGTCCTCCATGGCCGACGACCGAGTAGCCGGCGGCGCAACCCCGC
CGCCACCTCCTCCTCCCCCTCCTCTCGACGCCTCCGCGTTCACGCACACCCCGTACTACT
GTGAAGAAAATGTTCACTTGCTATGTAAGGAACTCATTAGAAGTGGAATTTCTGATCCTG
CTGGCACCAACTTATATGCTGTTTTCATATCAAATGAGGAAAAGAAGGTTCCTCTCTGGT
ATCAGAAAGCAAGTCATAGCGGTGATGGTTTTGTCCTGTGGGATTATCATGTAATTTGTA
TCCAGTCTAGGCGAAAAAATGGAGAAGTACTTGATCTTGTTTGGGATTTGGACTCCAGCC
TTCCTTTCCCATGTTCATTCATCCAGTACGTTTCTGATGCCATACGACCATTATCATTTG
GCAACTCTACCTACAGGAGGCTTTTCCGTGTGATTCATGCTCCTGTATTTCTTCGATCAT
TTGCATCTGATAGAAGCCACATGAAGGATCATGCAGGGAATTGGATTCAGTTGCCCCCAA
AGTATGAATCAATTGTTGCAGAAGATGGAACCACCAATAATCTGAATGAGTACATTACGA
TGTCTATGGATGATGTGAAGGACCTGGAAAGTATGGCTGATGATGTCTACTCCAGCAAAC
ATGGTGTGGTGATAAATGAAACTATCCTGCCTGAATTCTTCTCTCGCTTGCCTGGATGAC
TCAACAGGAGCTATCTATCCCGATTCATGAAGCTATTTTGTTGTCCAATGAGATTTATGA
ACCAAGTCCAGAGTTAAAATGATGTTGTCCAAGCAATTGTTAACACAATGTTTACACAGT
TTTGCTTGCTGAGTAAATCACACTTGCGATGATCAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case