cluster # 4363

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Oryza sativa
cluster # 4363 cluster # 4363 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4363#0 length = 511 sequences # 3

consensusID : consensus_4363#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 511
fasta sequence

                              [TTCCTCCTCCTCGACNTCCACACCCCCTTCCTCAACCTCATCACCGCCGCCGCCGACGACAAGTTCCCGGTGCGGCTGC-GGCCGTGCTGCGAGACGTTCACGGCGGAC-GGCCACTGC-GGGCAGGAGGACGAAGCCGGCAACAAGCAGTACACGGTGTGCGACGACCCGGAGCGGCACTTCTACTGGGACGACGTGCACCCCACGCAGGCCGCCTGGGCCGCCGTCGCCCAAGCCTTCACCCCCGCCATCCACCGCTTCCTCTCCACCTGAACGAACGAATGAATACTCACCAACCAGCTTTCTCATTTCCGACGAAATTCCGCGAAATTTCGACGTTTCTATATGGCTCGGAATTAAGTTTCGATTCGAATTTCGAAGGTTAAACAGTAGATTTGATCGAAATTCAGTAGATTTGCTCCNTGCACTTCTTCTTCTTCTTCTTCTTCGTCTTCTTGAACAACTTTTTTTGGGGCCTATCTAATTTATTATTACCTTTGGATGA--AAAAAAAAA]

[+] EMBL AU077872             [TTCCTCCTCCTCGACNTCCACACCCCCTTCCTCAACCTCATCACCGCCGCCGCCGACGACAAGTTCCCGGTGCGGCTGC GGCCGTGCTGCGAGACGTTCACGGCGGAC GGCCACTGC GGGCAGGAGGACGAAGCCGGCAACAAGCAGTACACGGTGTGCGACGACCCGGAGCGGCACTTCTACTGGGACGACGTGCACCCCACGCAGGCCGCCTGGGCCGCCGTCGCCCAAGCCTTCACCCCCGCCATCCACCGCTTCCTCTCCACCTGAACGAACGAATGAATACTCACCAACCAGCTTTCTCATTTCCGACGAAATTCCGCGAAATTTCGACGTTTCTATATGGCTCGGAATTAAGTTTCGATTCGAATTTCGAAGGTTAAACAGTAGATTTGATCGAAATTCAGTAGATTTGCTCCTTGCACTTCTTCTTCTTCTTCTTCTTCGTCTTCTTGAACAACTTTTTTTGGGGCCTATCTAATTTATTATTACCTTTGGATGA  AAAA     ]
[+] EMBL AU166904             [                                                                        CGGCTGC GGCCGTGCTGCGAGACGTTCACGGCGGAC GGCCNCTGC GGGCAGGAGGACGAAGCCGGCAACAAGCAGTACACGGTGTGCGACGACCCGGAGCGGCACTTCTACTGGGACGACGTGCACCCCACGCAGGCCGCCTGGGCCGCCGTCGCCCAAGCCTTCACCCCCGCCATCCACCGCTTCCTCTCCACCTGAACGAACGAATGAATACTCACCAACCAGCTTTCTCATTTCCGACGAAATTCCGCGAAATTTCGACGTTTCTATATGGCTCGGAATTAAGTTTCGATTCGAATTTCGAAGGTTAAACAGTAGATTTGATCGAAATTCAGTAGATTTGCTCCNTGCACTTCTTCTTCTTCTTCTTCTTCGTCTTCTTGAACAACTTTTTTTGGGGCCTATCTAATTTATTATTACCTTTGGATGA  AAAAA    ]
[+] EMBL AU166630             [                                                                      gcgGGCTGCGGGCCGTGCTGCGAGACGTTCACGGCGGACGGGCCACTGCGGGGCAGGAGGACGAAGCCGGCAACAAGCAGTACACGGTGTGCGACGACCCGGAGCGGCACTTCTACTGGGACGACGTGCACCCCACGCAGGCCGCCTGGGCCGCCGTCGCCCAAGCCTTCACCCCCGCCATCCACCGCTTCCTCTCCACCTGAACGAACGAATGAATACTCACCAACCAGCTTTCTCATTTCCGACGAAATTCCGCGAAATTTCGACGTTTCTATATGGCTCGGAATTAAGTTTCGATTCGAATTTCGAAGGTTAAACAGTAGATTTGATCGAAATTCAGTAGATTTGCTCCNTGCACTTCTTCTTCTTCTTCTTCTTCGTCTTCTTGAACAACTTTTTTTGGGGCCTATCTAATTTATTATTACCTTTGGATGATGAAAAAAAAA]




>consensus_4363#0
TTCCTCCTCCTCGACNTCCACACCCCCTTCCTCAACCTCATCACCGCCGCCGCCGACGAC
AAGTTCCCGGTGCGGCTGCGGCCGTGCTGCGAGACGTTCACGGCGGACGGCCACTGCGGG
CAGGAGGACGAAGCCGGCAACAAGCAGTACACGGTGTGCGACGACCCGGAGCGGCACTTC
TACTGGGACGACGTGCACCCCACGCAGGCCGCCTGGGCCGCCGTCGCCCAAGCCTTCACC
CCCGCCATCCACCGCTTCCTCTCCACCTGAACGAACGAATGAATACTCACCAACCAGCTT
TCTCATTTCCGACGAAATTCCGCGAAATTTCGACGTTTCTATATGGCTCGGAATTAAGTT
TCGATTCGAATTTCGAAGGTTAAACAGTAGATTTGATCGAAATTCAGTAGATTTGCTCCN
TGCACTTCTTCTTCTTCTTCTTCTTCGTCTTCTTGAACAACTTTTTTTGGGGCCTATCTA
ATTTATTATTACCTTTGGATGAAAAAAAAAA

clustalw multiple alignements is not computed in this case