cluster # 4379

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Oryza sativa
cluster # 4379 cluster # 4379 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4379#0 length = 894 sequences # 3

consensusID : consensus_4379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 894
fasta sequence

                              [GCTAGTATAGTATAGATCACTAGTACAAATACATCCAGAATCCTGATGCACGAATCACAATGTAAAAATTTTGCCGGCAGCCCAGCCCTGAAAAGTGTATTGCTATCTCATGATTCTTCCAGAGCTGTACTGGTAAATGGCATGCCATATGTGCTTCAGTGCCTACAGAAATGAACCAATGGAAAAGGATACAGGTGACAACAACGGAGTGGAACAGGCACGGCACAGGTCATGACTTGGCATCCGCACCAGTAGAGTCAGAGCTGAGAGTGACGCACGGGAACCAGTATCTGCGCTTGCCATCCCTGTGCCCATCGTCGATCATCGCAAGCCCTTCCTTGAGCAAAGTTTCAAGGACGTCAAATGGCACGG-CCAGTTGACCACGAGAAC-TTTC-TCTCGACTTGCTCTACGGTGACAAAA-CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTC-AAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTGGTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCTAGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCACCTTTTGCACACATCTCATGGAACTGTTGTCTAAATAGTGGATTTTTACGGATATCATTCTTATGCTTGCGTGCAAATTCTTCGAGCTGTGTCCGAAACGTCGCAAGCTGCTCCTTCATGACATCG]

[+] EMBL CB650168             [GCTAGTATAGTATAGATCACTAGTACAAATACATCCAGAATCCTGATGCACGAATCACAATGTAAAAATTTTGCCGGCAGCCCAGCCCTGAAAAGTGTATTGCTATCTCATGATTCTTCCAGAGCTGTACTGGTAAATGGCATGCCATATGTGCTTCAGTGCCTACAGAAATGAACCAATGGAAAAGGATACAGGTGACAACAACGGAGTGGAACAGGCACGGCACAGGTCATGACTTGGCATCCGCACCAGTAGAGTCAGAGCTGAGAGTGACGCACGGGAACCAGTATCTGCGCTTGCCATCCCTGTGCCCATCGTCGATCATCGCAAGCCCTTCCTTGAGCAAAGTTTCAAGGACGTC AATGGCACGG CCAGTTGACCACGAGAAC TTTC TCTCGACTTGCTCTACGGTGACAAAA CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTC AAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTGGTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCTAGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCACCTTTTGCACACATCTCATGGA                                                                                                        ]
[-] EMBL OSC31472             [                                                                                                                                                                                                                                                                                             AGTATCTGCGCTTGCCATCCCTGTGCCCATCGTCGATCATCGNAAGCCCTTCCTTGAGCAAAGTTTCAAGGANNTCAAATGGNACGG CCAGTTGACCACGAGAAC TTTC TCTCGACTTGCTCTACGGTGACAAAA CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTC AAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTT                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF323461             [                                                                                                                                                                                                                                                                                                                                                                 AGGACGTCAAAATGCACGGCCCAGTTGACCACGAGAACTTTTCTTCT GACTTGCTCTACGGTGACAAAACCCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTCAAAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTGGTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCTAGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCAACTTTTGCACACATCTCATGGAACTGTTGTCTAAATAGTGGATTTTTACGGATATCATTCTTATGCTTGCGTGCAAATTCTTCGAGCTGTGTCCGAAACGTCGCAAGCTGCTCCTTCATGACATCG]




>consensus_4379#0
GCTAGTATAGTATAGATCACTAGTACAAATACATCCAGAATCCTGATGCACGAATCACAA
TGTAAAAATTTTGCCGGCAGCCCAGCCCTGAAAAGTGTATTGCTATCTCATGATTCTTCC
AGAGCTGTACTGGTAAATGGCATGCCATATGTGCTTCAGTGCCTACAGAAATGAACCAAT
GGAAAAGGATACAGGTGACAACAACGGAGTGGAACAGGCACGGCACAGGTCATGACTTGG
CATCCGCACCAGTAGAGTCAGAGCTGAGAGTGACGCACGGGAACCAGTATCTGCGCTTGC
CATCCCTGTGCCCATCGTCGATCATCGCAAGCCCTTCCTTGAGCAAAGTTTCAAGGACGT
CAAATGGCACGGCCAGTTGACCACGAGAACTTTCTCTCGACTTGCTCTACGGTGACAAAA
CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACA
GAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTCAAAACCACTACCAAGGACCTTC
AGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTC
TTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTG
GTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCT
AGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCACCTTTTGCACAC
ATCTCATGGAACTGTTGTCTAAATAGTGGATTTTTACGGATATCATTCTTATGCTTGCGT
GCAAATTCTTCGAGCTGTGTCCGAAACGTCGCAAGCTGCTCCTTCATGACATCG

clustalw multiple alignements is not computed in this case