These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4379#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 894 fasta sequence [GCTAGTATAGTATAGATCACTAGTACAAATACATCCAGAATCCTGATGCACGAATCACAATGTAAAAATTTTGCCGGCAGCCCAGCCCTGAAAAGTGTATTGCTATCTCATGATTCTTCCAGAGCTGTACTGGTAAATGGCATGCCATATGTGCTTCAGTGCCTACAGAAATGAACCAATGGAAAAGGATACAGGTGACAACAACGGAGTGGAACAGGCACGGCACAGGTCATGACTTGGCATCCGCACCAGTAGAGTCAGAGCTGAGAGTGACGCACGGGAACCAGTATCTGCGCTTGCCATCCCTGTGCCCATCGTCGATCATCGCAAGCCCTTCCTTGAGCAAAGTTTCAAGGACGTCAAATGGCACGG-CCAGTTGACCACGAGAAC-TTTC-TCTCGACTTGCTCTACGGTGACAAAA-CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTC-AAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTGGTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCTAGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCACCTTTTGCACACATCTCATGGAACTGTTGTCTAAATAGTGGATTTTTACGGATATCATTCTTATGCTTGCGTGCAAATTCTTCGAGCTGTGTCCGAAACGTCGCAAGCTGCTCCTTCATGACATCG] [+] EMBL CB650168 [GCTAGTATAGTATAGATCACTAGTACAAATACATCCAGAATCCTGATGCACGAATCACAATGTAAAAATTTTGCCGGCAGCCCAGCCCTGAAAAGTGTATTGCTATCTCATGATTCTTCCAGAGCTGTACTGGTAAATGGCATGCCATATGTGCTTCAGTGCCTACAGAAATGAACCAATGGAAAAGGATACAGGTGACAACAACGGAGTGGAACAGGCACGGCACAGGTCATGACTTGGCATCCGCACCAGTAGAGTCAGAGCTGAGAGTGACGCACGGGAACCAGTATCTGCGCTTGCCATCCCTGTGCCCATCGTCGATCATCGCAAGCCCTTCCTTGAGCAAAGTTTCAAGGACGTC AATGGCACGG CCAGTTGACCACGAGAAC TTTC TCTCGACTTGCTCTACGGTGACAAAA CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTC AAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTGGTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCTAGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCACCTTTTGCACACATCTCATGGA ] [-] EMBL OSC31472 [ AGTATCTGCGCTTGCCATCCCTGTGCCCATCGTCGATCATCGNAAGCCCTTCCTTGAGCAAAGTTTCAAGGANNTCAAATGGNACGG CCAGTTGACCACGAGAAC TTTC TCTCGACTTGCTCTACGGTGACAAAA CCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTC AAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTT ] [-] EMBL CF323461 [ AGGACGTCAAAATGCACGGCCCAGTTGACCACGAGAACTTTTCTTCT GACTTGCTCTACGGTGACAAAACCCTTCAGCCTGAGCTAGCTCAAGTATCCCATTGTGATCTTTATTCAGTTCTGTAGGAACAGAACGCACAAGCTTTTTCTTCCCAACAGAAATTACTTCAAAAACCACTACCAAGGACCTTCAGCTTACTTATCGCACGCAAACAATCATCTGATGTTAACGATCCAAGATCAGCTTTCCTCTTCTGACAGAGGAGTTTACGGAGATCTAGCAAGTCAATCAAGCCACCGTTGGTCGCTCTGGTTGCTATGCATATGTCAACAATCTGAACTCCCAATTCATAGTAGAAGTCACCAATCCCTAGAAGCTCTGCCCAAGCTCCTTTATTCGAAGCCAGCGGGTCTACTCCAACTTTTGCACACATCTCATGGAACTGTTGTCTAAATAGTGGATTTTTACGGATATCATTCTTATGCTTGCGTGCAAATTCTTCGAGCTGTGTCCGAAACGTCGCAAGCTGCTCCTTCATGACATCG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||