cluster # 4382

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Oryza sativa
cluster # 4382 cluster # 4382 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4382#0 length = 410 sequences # 3

consensusID : consensus_4382#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 410
fasta sequence

                              [GGCGTCGTCGTCGGCGTCACCGGAGGAGGAGGCCCCGGCAATCGCGCANAAGGGGTTCTTCCTCCACCCGTCGCCGAGGAGCGCCGANCCGCCTCGCCTCCTGCCGCTGTTCCCCGTCACGTCCCCGAGGGTANCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGTCGCCGTCGCCTCGCCGTCGTTCGAGTGANCGAGCTATGCACGTCGGCGNACC-CGTCGCGCTGCTTAGATTATTTATGATATGAGCACTGCTCGGTAGTATGTACTGTTCGTACTCGTTCTTGGTGCTTAATTGCTGTAATTTTTTTCTCNCTTCATTGAGCGNTTTGCTCNCGAAGAAACAACGGAAAAGAAANACATNTTGANCGTCAGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU077914             [GGCGTCGTCGTCGGCGTCACCGGAGGAGGAGGCCCCGGCAATCGCGCANAAGGGGTTCTTCCTCCACCCGTCGCCGAGGAGCGCCGANCCGCCTCGCCTCCTGCCGCTGTTCCCCGTCACGTCCCCGAGGGTANCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGTCGCCGTCGCCTCGCCGTCGTTCGAGTGANCGAGCTATGCACGTCGGCGNACC CGTCGCGCTGCTTAGATTATTTATGATATGAGCACTGCTCGGTAGTATGTACTGTTCGTACTCGTTCTTGGTGCTTAATTGCTGTAATTTTTTTCTCACTTCATTGAGCGNTTTGCTCNCGAAGAAACAACGGAAAAGAAANACATNTTGATCGTCAGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU077926             [                                                                                                                   nTCACGTCCCCGAGGGTAGCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGTCGCCGTCGCCTCGCCGTCGTTCGAGTGANCGAGCTATGCACGTCGGCGAACCGCGTCGCGNTGCTTAGATTATTTATGATATGAGCACTGCNCGGTAGTATGTACTGTTCGTACNCGTTCTTGGTGCTTAATTGCTGTAATTTTTTTCTCNCTTCATTGAGCGNTTTNCTCNCGAAGAAACAACGGNAAANAAANACATNTTGANCGTCAGTTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU097483             [                                                                                                                                                                              CGCCTCGNCGTCGTTCGAGTGATCGAGCTATGCACGTCGACGNACC CGTNGCGCTGCTTAGATTATTTATGATATGANCACTGCTCGGTAGTATGTACTGTTCGTACTCGTTCTTGGTGCTTAATTGCTGTAATTTTTTTCTCNCTTCATTGANCGATTTGCTCCCGAAGAAACAACGGAAAAGAAACACATCTTGANCGTCAGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_4382#0
GGCGTCGTCGTCGGCGTCACCGGAGGAGGAGGCCCCGGCAATCGCGCANAAGGGGTTCTT
CCTCCACCCGTCGCCGAGGAGCGCCGANCCGCCTCGCCTCCTGCCGCTGTTCCCCGTCAC
GTCCCCGAGGGTANCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGTCGCCGTCGCCTC
GCCGTCGTTCGAGTGANCGAGCTATGCACGTCGGCGNACCCGTCGCGCTGCTTAGATTAT
TTATGATATGAGCACTGCTCGGTAGTATGTACTGTTCGTACTCGTTCTTGGTGCTTAATT
GCTGTAATTTTTTTCTCNCTTCATTGAGCGNTTTGCTCNCGAAGAAACAACGGAAAAGAA
ANACATNTTGANCGTCAGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case