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Oryza sativa
cluster # 4393 cluster # 4393       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4393#0 length = 1963 sequences # 1  
consensus_4393#1 length = 1490 sequences # 1  
consensus_4393#2 length = 940 sequences # 1  

consensusID : consensus_4393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1963
fasta sequence
                              [TCCCAGTGAAAAGTGCAGTGGCAGAGGCAGAGCAGCCGGTGAAGTAGCAGTTGGAGCTAAGCTAGCAATGGATCCCCTGAAGCTGAAACCACCCTCCATGGCCACCCGCAAGCGCCTCGCCGGCGCCGCCCTCAGCTGCCTCTCGCTCTTCCTCCTCTCCCGCGCCCTCCTCTTCTCCCAAGACGACCCGGAGCCCGTCAAGCGACCGGACGAGGCGTCCTCAATCTCATTGCCGCCCGACCGCATTGCCATTATTGCTGCTGCACCTGCGCCGAGCCCAGCTACTGCTGCTGCTTCCGATGGCTCGCCGGCGCCGGCCCAGGATGAAGTCCGGTGCGACCTGTTCGACGGCAGCTGGGTGTACGACCCGGCCGGCTATCCGCTCTACGACGCCGGGGAGTGCCCCTTCTTGAGCGACCAGGTCACCTGCTGGAGGAACGGCCGGCCGGACTCCGGCTACGAGCACTGGCGGTGGCAGCCCAGGCGGTGCGCCGCCGCTCTCAGGTGCGTGGCCACTGCTACCTACCTTGCATCTCTTCTGCCTTTTTGAAATTTCTCTTCATTTTGTTTTAAATCCTGGACAGACAAACTAAAGCTGGTCTCTTTAGTAGATTCTGAATCTGATTTGTTTTTGAAATGCGCATGAATCGTTCATGAATGCTCTCCGTTGTGTGTGTGTATCCCCTGTGACACAGTCGTAATCGATGGCTAAAATGAACAAGCCCGTGCAAGTCGCACTGTCTCAGGGCCCGTTCTTGGATACAAAAGGTAAATGAAAAGTGGGTAAAGTTGTCAACTTGTGACGATGTGCGTTGCTTTTGAGTTGGGAACACAGCTCTGACAGTGCCCTGTGCATAGTACTACTAGTGTTATGGCAGTAATTAATTATTTTTCACTTTGAAACACATAGTTGACACTAGTTGCACACATGACAACCAACCACGGTCACTGTTCCTGATTCCTCCGGTGCATCATTCCGACCGGAATAATCGTGTTGATTCTCCATGAGTAATCCTCTGCAAATCGCACACGTCGCACTGAATAATGCTTCACTTTTTTATCAGGCTGCGTGGTGGGGAGATGCTGGAGCAGTGCCGGGACAAGCGAGTGGTGCTCGTCGGCGACTCGCTCAACCGCAACATGTGGGAGTCGCTCGCCTGCGTCCTCTACGCCGCGGCGCCCGACCGCTCACGCGCCACCGTCGACGACGCCAGCGCCGACCACAAGATCTTCCAAGCATTGGATTACAACTGCACGGTGGAGTTCTACTGGAGCCCGTTCCTGGTGGACCTCGACGACCAGACCAGGGTGCTGAAGCTGGACCGCCTCCCGGCGACGACGTATCGCCGGCTCGCCGCCGCCGACGTGCTGGTGTTCAACACGGGCCACTGGTGGACGCACACCGGCAAGTTCAGGGCGTGGGATCACCTGGAGAGGAACGGGAAGAAGGTGGAGATGGGAGCGGAGGAAGCCTTCAACCGCGCGCTCCGGACATGGACGCGGTGGCTCGATCGAAACGTGGACTCTCACAAGACCATGGTGTTCTTCCGCAGCATCTCCCCCGAGCACAAGAACAAGAACTGGTGCTACAACGAGACGGCTCCGATGGCGAGGGCGGAGGAGTACGTGGAGGCGTTCCCGAGAGGGATGGTGTCGATCGTGGAGAGGAACGTGAGGAGGGCGAGGACGGCGGTGGGGTACCTGGACATCACCCGGCTGTCGGAGCTCCGGCGAGACGCGCACCCGTCAGTGTTCACGGTCAGGGGAGGGAAGCTGCTGACGCCGGAGCAGAGGCGGCAGCCGGGATCGTACGCCGACTGCAGCCACTGGTGCCTGCCCGGGCTGCCTGACACGTGGAACCTTCTCCTCTTTGCCTCCTGGACCTCGCTTCGATCCTGAGATCATCTCTTCTTCTCCATTGTCGATGCGCCATTGATGCATCATGCATGTATATATAGGATTA]

[+] EMBL AK064730             [TCCCAGTGAAAAGTGCAGTGGCAGAGGCAGAGCAGCCGGTGAAGTAGCAGTTGGAGCTAAGCTAGCAATGGATCCCCTGAAGCTGAAACCACCCTCCATGGCCACCCGCAAGCGCCTCGCCGGCGCCGCCCTCAGCTGCCTCTCGCTCTTCCTCCTCTCCCGCGCCCTCCTCTTCTCCCAAGACGACCCGGAGCCCGTCAAGCGACCGGACGAGGCGTCCTCAATCTCATTGCCGCCCGACCGCATTGCCATTATTGCTGCTGCACCTGCGCCGAGCCCAGCTACTGCTGCTGCTTCCGATGGCTCGCCGGCGCCGGCCCAGGATGAAGTCCGGTGCGACCTGTTCGACGGCAGCTGGGTGTACGACCCGGCCGGCTATCCGCTCTACGACGCCGGGGAGTGCCCCTTCTTGAGCGACCAGGTCACCTGCTGGAGGAACGGCCGGCCGGACTCCGGCTACGAGCACTGGCGGTGGCAGCCCAGGCGGTGCGCCGCCGCTCTCAGGTGCGTGGCCACTGCTACCTACCTTGCATCTCTTCTGCCTTTTTGAAATTTCTCTTCATTTTGTTTTAAATCCTGGACAGACAAACTAAAGCTGGTCTCTTTAGTAGATTCTGAATCTGATTTGTTTTTGAAATGCGCATGAATCGTTCATGAATGCTCTCCGTTGTGTGTGTGTATCCCCTGTGACACAGTCGTAATCGATGGCTAAAATGAACAAGCCCGTGCAAGTCGCACTGTCTCAGGGCCCGTTCTTGGATACAAAAGGTAAATGAAAAGTGGGTAAAGTTGTCAACTTGTGACGATGTGCGTTGCTTTTGAGTTGGGAACACAGCTCTGACAGTGCCCTGTGCATAGTACTACTAGTGTTATGGCAGTAATTAATTATTTTTCACTTTGAAACACATAGTTGACACTAGTTGCACACATGACAACCAACCACGGTCACTGTTCCTGATTCCTCCGGTGCATCATTCCGACCGGAATAATCGTGTTGATTCTCCATGAGTAATCCTCTGCAAATCGCACACGTCGCACTGAATAATGCTTCACTTTTTTATCAGGCTGCGTGGTGGGGAGATGCTGGAGCAGTGCCGGGACAAGCGAGTGGTGCTCGTCGGCGACTCGCTCAACCGCAACATGTGGGAGTCGCTCGCCTGCGTCCTCTACGCCGCGGCGCCCGACCGCTCACGCGCCACCGTCGACGACGCCAGCGCCGACCACAAGATCTTCCAAGCATTGGATTACAACTGCACGGTGGAGTTCTACTGGAGCCCGTTCCTGGTGGACCTCGACGACCAGACCAGGGTGCTGAAGCTGGACCGCCTCCCGGCGACGACGTATCGCCGGCTCGCCGCCGCCGACGTGCTGGTGTTCAACACGGGCCACTGGTGGACGCACACCGGCAAGTTCAGGGCGTGGGATCACCTGGAGAGGAACGGGAAGAAGGTGGAGATGGGAGCGGAGGAAGCCTTCAACCGCGCGCTCCGGACATGGACGCGGTGGCTCGATCGAAACGTGGACTCTCACAAGACCATGGTGTTCTTCCGCAGCATCTCCCCCGAGCACAAGAACAAGAACTGGTGCTACAACGAGACGGCTCCGATGGCGAGGGCGGAGGAGTACGTGGAGGCGTTCCCGAGAGGGATGGTGTCGATCGTGGAGAGGAACGTGAGGAGGGCGAGGACGGCGGTGGGGTACCTGGACATCACCCGGCTGTCGGAGCTCCGGCGAGACGCGCACCCGTCAGTGTTCACGGTCAGGGGAGGGAAGCTGCTGACGCCGGAGCAGAGGCGGCAGCCGGGATCGTACGCCGACTGCAGCCACTGGTGCCTGCCCGGGCTGCCTGACACGTGGAACCTTCTCCTCTTTGCCTCCTGGACCTCGCTTCGATCCTGAGATCATCTCTTCTTCTCCATTGTCGATGCGCCATTGATGCATCATGCATGTATATATAGGATTA]


>consensus_4393#0 TCCCAGTGAAAAGTGCAGTGGCAGAGGCAGAGCAGCCGGTGAAGTAGCAGTTGGAGCTAA GCTAGCAATGGATCCCCTGAAGCTGAAACCACCCTCCATGGCCACCCGCAAGCGCCTCGC CGGCGCCGCCCTCAGCTGCCTCTCGCTCTTCCTCCTCTCCCGCGCCCTCCTCTTCTCCCA AGACGACCCGGAGCCCGTCAAGCGACCGGACGAGGCGTCCTCAATCTCATTGCCGCCCGA CCGCATTGCCATTATTGCTGCTGCACCTGCGCCGAGCCCAGCTACTGCTGCTGCTTCCGA TGGCTCGCCGGCGCCGGCCCAGGATGAAGTCCGGTGCGACCTGTTCGACGGCAGCTGGGT GTACGACCCGGCCGGCTATCCGCTCTACGACGCCGGGGAGTGCCCCTTCTTGAGCGACCA GGTCACCTGCTGGAGGAACGGCCGGCCGGACTCCGGCTACGAGCACTGGCGGTGGCAGCC CAGGCGGTGCGCCGCCGCTCTCAGGTGCGTGGCCACTGCTACCTACCTTGCATCTCTTCT GCCTTTTTGAAATTTCTCTTCATTTTGTTTTAAATCCTGGACAGACAAACTAAAGCTGGT CTCTTTAGTAGATTCTGAATCTGATTTGTTTTTGAAATGCGCATGAATCGTTCATGAATG CTCTCCGTTGTGTGTGTGTATCCCCTGTGACACAGTCGTAATCGATGGCTAAAATGAACA AGCCCGTGCAAGTCGCACTGTCTCAGGGCCCGTTCTTGGATACAAAAGGTAAATGAAAAG TGGGTAAAGTTGTCAACTTGTGACGATGTGCGTTGCTTTTGAGTTGGGAACACAGCTCTG ACAGTGCCCTGTGCATAGTACTACTAGTGTTATGGCAGTAATTAATTATTTTTCACTTTG AAACACATAGTTGACACTAGTTGCACACATGACAACCAACCACGGTCACTGTTCCTGATT CCTCCGGTGCATCATTCCGACCGGAATAATCGTGTTGATTCTCCATGAGTAATCCTCTGC AAATCGCACACGTCGCACTGAATAATGCTTCACTTTTTTATCAGGCTGCGTGGTGGGGAG ATGCTGGAGCAGTGCCGGGACAAGCGAGTGGTGCTCGTCGGCGACTCGCTCAACCGCAAC ATGTGGGAGTCGCTCGCCTGCGTCCTCTACGCCGCGGCGCCCGACCGCTCACGCGCCACC GTCGACGACGCCAGCGCCGACCACAAGATCTTCCAAGCATTGGATTACAACTGCACGGTG GAGTTCTACTGGAGCCCGTTCCTGGTGGACCTCGACGACCAGACCAGGGTGCTGAAGCTG GACCGCCTCCCGGCGACGACGTATCGCCGGCTCGCCGCCGCCGACGTGCTGGTGTTCAAC ACGGGCCACTGGTGGACGCACACCGGCAAGTTCAGGGCGTGGGATCACCTGGAGAGGAAC GGGAAGAAGGTGGAGATGGGAGCGGAGGAAGCCTTCAACCGCGCGCTCCGGACATGGACG CGGTGGCTCGATCGAAACGTGGACTCTCACAAGACCATGGTGTTCTTCCGCAGCATCTCC CCCGAGCACAAGAACAAGAACTGGTGCTACAACGAGACGGCTCCGATGGCGAGGGCGGAG GAGTACGTGGAGGCGTTCCCGAGAGGGATGGTGTCGATCGTGGAGAGGAACGTGAGGAGG GCGAGGACGGCGGTGGGGTACCTGGACATCACCCGGCTGTCGGAGCTCCGGCGAGACGCG CACCCGTCAGTGTTCACGGTCAGGGGAGGGAAGCTGCTGACGCCGGAGCAGAGGCGGCAG CCGGGATCGTACGCCGACTGCAGCCACTGGTGCCTGCCCGGGCTGCCTGACACGTGGAAC CTTCTCCTCTTTGCCTCCTGGACCTCGCTTCGATCCTGAGATCATCTCTTCTTCTCCATT GTCGATGCGCCATTGATGCATCATGCATGTATATATAGGATTA



consensusID : consensus_4393#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1490
fasta sequence
                              [TTAAACTCTCGTCGTTAGCGATGGATCATTCCGCCGCCGCCATGGCGAACAAGCCGTCGCTCGCCGTCGCGGCGGCGTCGCGGCAGAGGTGGGCGCTGGCCACCTCGCTCTGCGCGCTCCTCTGCCTCTCCCTCGTCGTCTCCGCCGGCCTCCTCCTCCTCGGCTCGACGCGCCCGTTCCGCCGGCCGCTCTTCGCGGCGCCGCAGCAGCAGCGGGAGGTGGTCGGGGAGGCGCCGTGGGAGAGGTACGTCAAGCTGGCGCAAGCGGCGTCGCCGGGCGGTGCCCGTGATCGCGCGCCTGATCTTGGCGGGGATGAGGGGGCGGAGGGGGACGACGATGATGCCATCAGCACCGCACCGGCGCCGGCGCCTTCGCCGGCCGCCGAGGAGGGAGGAGATGAGGAGAGCTGCGACCTGTTCCAGGGGCGGTGGGTGCGCGACGGCGCGGCGGCGGGGGGCTACCCGCTGTACGAGGCGGCGGAGTGCCCGTTCCTGAGCGACCAGGTGACGTGCCGGCGGAACGGGCGGCCGGACGCCGAGTACGAGCAGTGGCGATGGGAGCCGCGAGGGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGTAGGGAGGCGGCGCTGGCGCTAGCGCTGGAGCAGTGCCGGAACCGGAGGGTGGTGTTCGTCGGCGACTCGCTGAACCGCAACATGTGGGAGTCGCTCGCCTGCCTCCTCTACACCGCCGTGCCCGACCGCTCGCGGTCGCGCGTCCTCGACGTCGCCTCCGACTACAGGATCTTCCGCGCCATGGACTACAACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGACCGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCCGACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACCTCAGAGCGTGGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGATGGGAGGCGAGGAGGCGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAACGTGGACTCGGCCAGGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAGCGAAAACTGGTGCTACAACCAGACGTCCCCAATCACGGACGAGACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGGTGTCCATCGTCGAGAGGAACATCCGGAGCACGAGGACGCCCGTCACGTACCTCAACATCACCCGCCTCTCCGAGCTCCGGGTCGACGCGCATCCGTCGGTGTACACCATCACCAGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGGCAACAGCCGCTGGTGTACGCTGACTGTAGCCACTGGTGCTTACCGGGGCTGCCTGATACCTGGAACCTGCTCTTGCTTGCCTCCTTGGCGAGGTCTCCAGTTAATGTACACTAGCTTAGGATAAAAGAGATAATACACAGTTTT]

[+] EMBL AK105551             [TTAAACTCTCGTCGTTAGCGATGGATCATTCCGCCGCCGCCATGGCGAACAAGCCGTCGCTCGCCGTCGCGGCGGCGTCGCGGCAGAGGTGGGCGCTGGCCACCTCGCTCTGCGCGCTCCTCTGCCTCTCCCTCGTCGTCTCCGCCGGCCTCCTCCTCCTCGGCTCGACGCGCCCGTTCCGCCGGCCGCTCTTCGCGGCGCCGCAGCAGCAGCGGGAGGTGGTCGGGGAGGCGCCGTGGGAGAGGTACGTCAAGCTGGCGCAAGCGGCGTCGCCGGGCGGTGCCCGTGATCGCGCGCCTGATCTTGGCGGGGATGAGGGGGCGGAGGGGGACGACGATGATGCCATCAGCACCGCACCGGCGCCGGCGCCTTCGCCGGCCGCCGAGGAGGGAGGAGATGAGGAGAGCTGCGACCTGTTCCAGGGGCGGTGGGTGCGCGACGGCGCGGCGGCGGGGGGCTACCCGCTGTACGAGGCGGCGGAGTGCCCGTTCCTGAGCGACCAGGTGACGTGCCGGCGGAACGGGCGGCCGGACGCCGAGTACGAGCAGTGGCGATGGGAGCCGCGAGGGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGTAGGGAGGCGGCGCTGGCGCTAGCGCTGGAGCAGTGCCGGAACCGGAGGGTGGTGTTCGTCGGCGACTCGCTGAACCGCAACATGTGGGAGTCGCTCGCCTGCCTCCTCTACACCGCCGTGCCCGACCGCTCGCGGTCGCGCGTCCTCGACGTCGCCTCCGACTACAGGATCTTCCGCGCCATGGACTACAACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGACCGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCCGACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACCTCAGAGCGTGGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGATGGGAGGCGAGGAGGCGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAACGTGGACTCGGCCAGGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAGCGAAAACTGGTGCTACAACCAGACGTCCCCAATCACGGACGAGACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGGTGTCCATCGTCGAGAGGAACATCCGGAGCACGAGGACGCCCGTCACGTACCTCAACATCACCCGCCTCTCCGAGCTCCGGGTCGACGCGCATCCGTCGGTGTACACCATCACCAGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGGCAACAGCCGCTGGTGTACGCTGACTGTAGCCACTGGTGCTTACCGGGGCTGCCTGATACCTGGAACCTGCTCTTGCTTGCCTCCTTGGCGAGGTCTCCAGTTAATGTACACTAGCTTAGGATAAAAGAGATAATACACAGTTTT]


>consensus_4393#1 TTAAACTCTCGTCGTTAGCGATGGATCATTCCGCCGCCGCCATGGCGAACAAGCCGTCGC TCGCCGTCGCGGCGGCGTCGCGGCAGAGGTGGGCGCTGGCCACCTCGCTCTGCGCGCTCC TCTGCCTCTCCCTCGTCGTCTCCGCCGGCCTCCTCCTCCTCGGCTCGACGCGCCCGTTCC GCCGGCCGCTCTTCGCGGCGCCGCAGCAGCAGCGGGAGGTGGTCGGGGAGGCGCCGTGGG AGAGGTACGTCAAGCTGGCGCAAGCGGCGTCGCCGGGCGGTGCCCGTGATCGCGCGCCTG ATCTTGGCGGGGATGAGGGGGCGGAGGGGGACGACGATGATGCCATCAGCACCGCACCGG CGCCGGCGCCTTCGCCGGCCGCCGAGGAGGGAGGAGATGAGGAGAGCTGCGACCTGTTCC AGGGGCGGTGGGTGCGCGACGGCGCGGCGGCGGGGGGCTACCCGCTGTACGAGGCGGCGG AGTGCCCGTTCCTGAGCGACCAGGTGACGTGCCGGCGGAACGGGCGGCCGGACGCCGAGT ACGAGCAGTGGCGATGGGAGCCGCGAGGGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGGA GTAGGGAGGCGGCGCTGGCGCTAGCGCTGGAGCAGTGCCGGAACCGGAGGGTGGTGTTCG TCGGCGACTCGCTGAACCGCAACATGTGGGAGTCGCTCGCCTGCCTCCTCTACACCGCCG TGCCCGACCGCTCGCGGTCGCGCGTCCTCGACGTCGCCTCCGACTACAGGATCTTCCGCG CCATGGACTACAACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGA CGAAGCAGGACCGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGC TGCGCGGCGCCGACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACC TCAGAGCGTGGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGATGGGAGGCGAGGAGG CGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAACGTGGACTCGGCCA GGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAGCGAAAACTGGTGCTACA ACCAGACGTCCCCAATCACGGACGAGACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGG TGTCCATCGTCGAGAGGAACATCCGGAGCACGAGGACGCCCGTCACGTACCTCAACATCA CCCGCCTCTCCGAGCTCCGGGTCGACGCGCATCCGTCGGTGTACACCATCACCAGGGAAG GGAAGCCCCTGAGCACGGAGCAGCGGCAACAGCCGCTGGTGTACGCTGACTGTAGCCACT GGTGCTTACCGGGGCTGCCTGATACCTGGAACCTGCTCTTGCTTGCCTCCTTGGCGAGGT CTCCAGTTAATGTACACTAGCTTAGGATAAAAGAGATAATACACAGTTTT



consensusID : consensus_4393#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 940
fasta sequence
                              [CAGTGTTCGTTTAGTTATCAATCCGTACATCGAATGACAAGCAGGACCTTTCTAAAGTTCTGATTACATATGTGACTCAAACATGCACAGGACTACAACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGACCGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCCGACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACCTCAGAGCGTAAGCCACTCCGCTCCAGAGCGTCTCCTCTCTGGCTCTCTCTCTCTCCAGCAGGGCAGTGAAGCCGAGTGTGTTACTGCAGGTGGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGATGGGAGGCGAGGAGGCGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAACGTGGACTCGGCCAGGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAGGTAAAAGTTAACTTGCACCACCCGCGGCACCCAGCCACAATGGACACCTCTGATGACTGATCTAACACCTGCAAATGCAGCGAAAACTGGTGCTACAACCAGACGTCCCCAATCACGGACGAGACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGGTGTCCATCGTCGAGAGGAACATCCGGAGCACGAGGACGCCCGTCACGTACCTCAACATCACCCGCCTCTCCGAGCTCCGGGTCGACGCGCATCCGTCGGTGTACACCATCACCAGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGGCAACAGCCGCTGGTGTACGCTGACTGTAGCCACTGGTGCTTACCGGGGCTGCCTGATACCTGGAACCTGCTCTTGCTTGCCTCCTTGGCGAGGTCTCCAGTTAATGTACACTAGCTTAGGATAAAAG]

[-] EMBL AK060357             [CAGTGTTCGTTTAGTTATCAATCCGTACATCGAATGACAAGCAGGACCTTTCTAAAGTTCTGATTACATATGTGACTCAAACATGCACAGGACTACAACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGACCGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCCGACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACCTCAGAGCGTAAGCCACTCCGCTCCAGAGCGTCTCCTCTCTGGCTCTCTCTCTCTCCAGCAGGGCAGTGAAGCCGAGTGTGTTACTGCAGGTGGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGATGGGAGGCGAGGAGGCGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAACGTGGACTCGGCCAGGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAGGTAAAAGTTAACTTGCACCACCCGCGGCACCCAGCCACAATGGACACCTCTGATGACTGATCTAACACCTGCAAATGCAGCGAAAACTGGTGCTACAACCAGACGTCCCCAATCACGGACGAGACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGGTGTCCATCGTCGAGAGGAACATCCGGAGCACGAGGACGCCCGTCACGTACCTCAACATCACCCGCCTCTCCGAGCTCCGGGTCGACGCGCATCCGTCGGTGTACACCATCACCAGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGGCAACAGCCGCTGGTGTACGCTGACTGTAGCCACTGGTGCTTACCGGGGCTGCCTGATACCTGGAACCTGCTCTTGCTTGCCTCCTTGGCGAGGTCTCCAGTTAATGTACACTAGCTTAGGATAAAAG]


>consensus_4393#2 CAGTGTTCGTTTAGTTATCAATCCGTACATCGAATGACAAGCAGGACCTTTCTAAAGTTC TGATTACATATGTGACTCAAACATGCACAGGACTACAACTGCTCGGTGGAGTTCTTCTGG AGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGACCGGACGAGGGCGCTCAAGCTTGAC CAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCCGACGTCCTCGTCTTCAACACCGGC CACTGGTGGACCCACACCGGCAACCTCAGAGCGTAAGCCACTCCGCTCCAGAGCGTCTCC TCTCTGGCTCTCTCTCTCTCCAGCAGGGCAGTGAAGCCGAGTGTGTTACTGCAGGTGGGA CCATCTGGAGGCGGACGGGAAGCCGGTCGAGATGGGAGGCGAGGAGGCGTTCAACCAGGC ACTTGGGACATGGGCGAGCTGGGTCGACCAAAACGTGGACTCGGCCAGGACCAGGGTCTT CTTCCGAAGCATCTCCCCAGAACACAAGAGGTAAAAGTTAACTTGCACCACCCGCGGCAC CCAGCCACAATGGACACCTCTGATGACTGATCTAACACCTGCAAATGCAGCGAAAACTGG TGCTACAACCAGACGTCCCCAATCACGGACGAGACGAAGATCGTCCCATGGTTCCCGAGG GGCCTGGTGTCCATCGTCGAGAGGAACATCCGGAGCACGAGGACGCCCGTCACGTACCTC AACATCACCCGCCTCTCCGAGCTCCGGGTCGACGCGCATCCGTCGGTGTACACCATCACC AGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGGCAACAGCCGCTGGTGTACGCTGACTGT AGCCACTGGTGCTTACCGGGGCTGCCTGATACCTGGAACCTGCTCTTGCTTGCCTCCTTG GCGAGGTCTCCAGTTAATGTACACTAGCTTAGGATAAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      TCCCAGTGAAAAGTGCAGTGGCAGAGGCAGAGCAGCCGGTGAAGTAGCAGTTGGAGCTAA 60
                                                                                  

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      GCTAGCAATGGATCCCCTGAAGCTGAAACCACCCTCCATGGCCACCCGCAAGCGCCTCGC 120
                                                                                  

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CGGCGCCGCCCTCAGCTGCCTCTCGCTCTTCCTCCTCTCCCGCGCCCTCCTCTTCTCCCA 180
                                                                                  

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      AGACGACCCGGAGCCCGTCAAGCGACCGGACGAGGCGTCCTCAATCTCATTGCCGCCCGA 240
                                                                                  

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CCGCATTGCCATTATTGCTGCTGCACCTGCGCCGAGCCCAGCTACTGCTGCTGCTTCCGA 300
                                                                                  

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      TGGCTCGCCGGCGCCGGCCCAGGATGAAGTCCGGTGCGACCTGTTCGACGGCAGCTGGGT 360
                                                                                  

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      GTACGACCCGGCCGGCTATCCGCTCTACGACGCCGGGGAGTGCCCCTTCTTGAGCGACCA 420
                                                                                  

consensus_4393#1      --------------------------------------TTAAACTCTCGTCGTTAGCGAT 22
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      GGTCACCTGCTGGAGGAACGGCCGGCCGGACTCCGGCTACGAGCACTGGCGGTGGCAGCC 480
                                                                                  

consensus_4393#1      GGATCATTCCGCCGCCGCCATGGCGAACAAGCCGTCGCTCGCCGTCGCGGCGGCGTCGCG 82
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CAGGCGGTGCGCCGCCGCTCTCAGGTGCGTGGCCACTGCTACCTACCTTGCATCTCTTCT 540
                                                                                  

consensus_4393#1      GCAGAGGTGGG--CGCTGGCCACCTCGCTCTGCGCGCTCCTCTGCCTCTCCCTCGTCGTC 140
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      GCCTTTTTGAAATTTCTCTTCATTTTGTTTTAAATCCTGGACAGACAAACTAAAGCTGGT 600
                                                                                  

consensus_4393#1      TCCGCCGGCCTCCTCCTCCTCGGCTCGACGCGCCCGTTCCGCCGG--CCGCTCTTCGCGG 198
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CTCTTTAGTAGATTCTGAATCTGATTTGTTTTTGAAATGCGCATGAATCGTTCATGAATG 660
                                                                                  

consensus_4393#1      CGCCGCAGCAGCAGCGGGAGGTGGTCGGGGAGGCGCCGTGGGAGAGGTACGT------CA 252
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CTCTCCGTTGTGTGTGTGTATCCCCTGTGACACAGTCGTAATCGATGGCTAAAATGAACA 720
                                                                                  

consensus_4393#1      AGCTGGCGCAAGCGGCGTCGCCGGGCGGTGCCCGTGATCGCGCGCCTGATCTTGGCGGGG 312
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      AGCCCGTGCAAGTCGCACTGTC--TCAGGGCCCGTTCTTGGATACAAAAGGTAAATGAAA 778
                                                                                  

consensus_4393#1      ATGAGGGGGCGGAGGGGGACGACGATGATGCCATCAGCACCGCACCGGCGCCGGCGCCTT 372
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      AGTGGGTAAAGTTGTCAACTTGTGACGATGTGCGTTGCTTTTGAGTTGGGAACACAGCTC 838
                                                                                  

consensus_4393#1      CGCCGGCCGCCGAGGAGGGAGGAGATGAGGAGAGCTGCGACCTGTTCCAGGGGCGGTGGG 432
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      TGACAGTGCCCTGTG---CATAGTACTACTAGTGTTATGGCAGTAATTAATTATTTTTCA 895
                                                                                  

consensus_4393#1      TGCGCGACGGCGCGGCGGCGGGGGGCTACCCGCTGTACGAGGCGGCGGAGTGCCCGTTCC 492
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CTTTGAAACACATAGTTGACACTAGTTGCACACATGACAACCAACCACGGTCACTGTTCC 955
                                                                                  

consensus_4393#1      TGAGCGACCAGGTGACGTGCCGGCGGAACGGGCGGCCGGACGCCGAGTACGAGCAGTGGC 552
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      TGATTCCTCCGGTGCATCATT--CCGACCGGAATAATCGTGTTGATTCTCCATGAGTAAT 1013
                                                                                  

consensus_4393#1      GATGGGAGCCGCGAGGGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGTAGGGAGGCGG 612
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      CCTCTGCAAATCGCACACGTCGCACTGAATAATGCTTCACTTTTTTATCAGGCTGCGTGG 1073
                                                                                  

consensus_4393#1      CGCTGGCGCTAGCGCTGGAGCAGTGCCGGAACCGGAGGGTGGTGTTCGTCGGCGACTCGC 672
consensus_4393#2      ------------------------------------------------------------
consensus_4393#0      TGGGGA----GATGCTGGAGCAGTGCCGGGACAAGCGAGTGGTGCTCGTCGGCGACTCGC 1129
                                                                                  

consensus_4393#1      TGAACCGCAACATGTGGGAGTCGCTCGCCTGCCT-CCTCTACACCGCCGTGCCCGACCGC 731
consensus_4393#2      --------------CAGTGTTCGTTTAGTTATCAATCCGTACATCGA-ATGACAAGCAGG 45
consensus_4393#0      TCAACCGCAACATGTGGGAGTCGCTCGCCTGCGT-CCTCTACGCCGCGGCGCCCGACCGC 1188
                                      *   *** *    *      *  ***  **    * *   * * 

consensus_4393#1      TCGCGGTCGCGCGTCCTCGACGTCGCCTCCGACTACAGGATCTTCCGCGCCATGGACTAC 791
consensus_4393#2      AC-CTTTCTAAAGTTCT-GATTACATATGTGACTCAAACAT-------GCACAGGACTAC 96
consensus_4393#0      TCACGCGCCACCGTCGACGACGCCAGCGCCGACCACAAGATCTTCCAAGCATTGGATTAC 1248
                       * *   *    **    **   *      ***   *  **       **   *** ***

consensus_4393#1      AACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGAC 851
consensus_4393#2      AACTGCTCGGTGGAGTTCTTCTGGAGCCCGTTCCTGGTGACGCTCGAGACGAAGCAGGAC 156
consensus_4393#0      AACTGCACGGTGGAGTTCTACTGGAGCCCGTTCCTGGTGGACCTCGAC---------GAC 1299
                      ****** ************ *******************   *****          ***

consensus_4393#1      CGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCC 911
consensus_4393#2      CGGACGAGGGCGCTCAAGCTTGACCAGCTCCCGGCTACGCTGGAGAAGCTGCGCGGCGCC 216
consensus_4393#0      CAGACCAGGGTGCTGAAGCTGGACCGCCTCCCGGCGACGACGTATCGCCGGCTCGCCGCC 1359
                      * *** **** *** ***** ****  ******** ***  * *    * ** ** ****

consensus_4393#1      G---ACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACCTCAGAGCG 968
consensus_4393#2      G---ACGTCCTCGTCTTCAACACCGGCCACTGGTGGACCCACACCGGCAACCTCAGAGCG 273
consensus_4393#0      GCCGACGTGCTGGTGTTCAACACGGGCCACTGGTGGACGCACACCGGCAAGTTCAGGGCG 1419
                      *   **** ** ** ******** ************** ***********  **** ***

consensus_4393#1      T----------------------------------------------------------- 969
consensus_4393#2      TAAGCCACTCCGCTCCAGAGCGTCTCCTCTCTGGCTCTCTCTCTCTCCAGCAGGGCAGTG 333
consensus_4393#0      T----------------------------------------------------------- 1420
                      *                                                           

consensus_4393#1      -----------------------GGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGAT 1006
consensus_4393#2      AAGCCGAGTGTGTTACTGCAGGTGGGACCATCTGGAGGCGGACGGGAAGCCGGTCGAGAT 393
consensus_4393#0      -----------------------GGGATCACCTGGAGAGGAACGGGAAGAAGGTGGAGAT 1457
                                             **** ** ******  * ********  *** *****

consensus_4393#1      GGGAGGCGAGGAGGCGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAA 1066
consensus_4393#2      GGGAGGCGAGGAGGCGTTCAACCAGGCACTTGGGACATGGGCGAGCTGGGTCGACCAAAA 453
consensus_4393#0      GGGAGCGGAGGAAGCCTTCAACCGCGCGCTCCGGACATGGACGCGGTGGCTCGATCGAAA 1517
                      *****  ***** ** *******  ** **  ******** ** * *** **** * ***

consensus_4393#1      CGTGGACTCGGCCAGGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAG--- 1123
consensus_4393#2      CGTGGACTCGGCCAGGACCAGGGTCTTCTTCCGAAGCATCTCCCCAGAACACAAGAGGTA 513
consensus_4393#0      CGTGGACTCTCACAAGACCATGGTGTTCTTCCGCAGCATCTCCCCCGAGCACAAGAA--- 1574
                      *********   ** ***** *** ******** *********** ** *******    

consensus_4393#1      ------------------------------------------------------------
consensus_4393#2      AAAGTTAACTTGCACCACCCGCGGCACCCAGCCACAATGGACACCTCTGATGACTGATCT 573
consensus_4393#0      ------------------------------------------------------------
                                                                                  

consensus_4393#1      -----------------CGAAAACTGGTGCTACAACCAGACGTCCCCAATCACGGACGAG 1166
consensus_4393#2      AACACCTGCAAATGCAGCGAAAACTGGTGCTACAACCAGACGTCCCCAATCACGGACGAG 633
consensus_4393#0      -----------------CAAGAACTGGTGCTACAACGAGACGGCTCCGATGGCGAGGGCG 1617
                                       * * *************** ***** * ** **  **   * *

consensus_4393#1      ACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGGTGTCCATCGTCGAGAGGAACATCCGG 1226
consensus_4393#2      ACGAAGATCGTCCCATGGTTCCCGAGGGGCCTGGTGTCCATCGTCGAGAGGAACATCCGG 693
consensus_4393#0      GAGGAGTACGTGGAGGCGTTCCCGAGAGGGATGGTGTCGATCGTGGAGAGGAACGTGAGG 1677
                        * **  ***      ********* **  ******* ***** ********* *  **

consensus_4393#1      AGCACGAGGACGCCCGTCACGTACCTCAACATCACCCGCCTCTCCGAGCTCCGGGTCGAC 1286
consensus_4393#2      AGCACGAGGACGCCCGTCACGTACCTCAACATCACCCGCCTCTCCGAGCTCCGGGTCGAC 753
consensus_4393#0      AGGGCGAGGACGGCGGTGGGGTACCTGGACATCACCCGGCTGTCGGAGCTCCGGCGAGAC 1737
                      **  ******** * **   ******  ********** ** ** *********   ***

consensus_4393#1      GCGCATCCGTCGGTGTACACCATCACCAGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGG 1346
consensus_4393#2      GCGCATCCGTCGGTGTACACCATCACCAGGGAAGGGAAGCCCCTGAGCACGGAGCAGCGG 813
consensus_4393#0      GCGCACCCGTCAGTGTTCACGGTCA---GGGGAGGGAAGCTGCTGACGCCGGAGCAGAGG 1794
                      ***** ***** **** ***  ***   *** ********  ****   ******** **

consensus_4393#1      CAACAGCCGCTGGTGTACGCTGACTGTAGCCACTGGTGCTTACCGGGGCTGCCTGATACC 1406
consensus_4393#2      CAACAGCCGCTGGTGTACGCTGACTGTAGCCACTGGTGCTTACCGGGGCTGCCTGATACC 873
consensus_4393#0      CGGCAGCCGGGATCGTACGCCGACTGCAGCCACTGGTGCCTGCCCGGGCTGCCTGACACG 1854
                      *  ******     ****** ***** ************ * ** *********** ** 

consensus_4393#1      TGGAACCTGCTCTTGCTTGCCTCCTTGGCGA------GGTCTCCAGTTAATGTACACTAG 1460
consensus_4393#2      TGGAACCTGCTCTTGCTTGCCTCCTTGGCGA------GGTCTCCAGTTAATGTACACTAG 927
consensus_4393#0      TGGAACCTTCTCCTCTTTGCCTCCTGGACCTCGCTTCGATCCTGAGATCATCTCTTCTTC 1914
                      ******** *** *  ********* * *        * **   ** * ** *   **  

consensus_4393#1      CTTAGGATAAAAGAGATAATACACAGTTTT------------------- 1490
consensus_4393#2      CTTAGGATAAAAG------------------------------------ 940
consensus_4393#0      TCCATTGTCGATGCGCCATTGATGCATCATGCATGTATATATAGGATTA 1963
                         *   *  * *                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)