cluster # 4394

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Oryza sativa
cluster # 4394 cluster # 4394 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4394#0 length = 484 sequences # 3

consensusID : consensus_4394#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 484
fasta sequence

                              [CGATGCGCATTCAAAGGCATGCATGGTGGATCCTGAAGATAACCAGAACTGGATCTTGATACAGAATTTCGTTCCTCCAATGTCATACTTAAGCTCAAGACTAGGTGAACACAACCCAATCATGTTCTTTCTGACTTGGAATTCGAACATGAAACATTTGCTAATT-GCAATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTTTTTTTGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGGCGGCCCAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCT-TGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGGACACCAGTTGTTGAAATGAGTTTAACTTGGCTTTAAAAAAAA]

[+] EMBL BI802210             [CGATGCGCATTCAAAGGCATGCATGGTGGATCCTGAAGATAACCAGAACTGGATCTTGATACAGAATTTCGTTCCTCCAATGTCATACTTAAGCTCAAGACTAGGTGAACACAACCCAATCATGTTCTTTCTGACTTGGAATTCGAACATGAAACATTTGCTAATTGGCAATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTGTTTGTGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGCCGCCCAAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCT TGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGAACACCAGTTGTTGAAATGAGTTTAACTTGGCTTTAAAAAAAA]
[-] EMBL CB966579             [                                                                                                                                                           ATTTGCTAATT GCCATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACCGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTCCCATTTTTTTTTTTTTTTTGTTGTATCTGTTCTCTTAACCCATCCAACTATTCTGGGCGGCCCAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCTNTGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGGACCCCCGTTGTTGAAATGAGTTTA                  ]
[-] EMBL CB964565             [                                                                                                                                                           ATTTGCTAATT GCAATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTTTTTTTGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGGCGGCCCAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCT TGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGGACACCAGTTGTTGAAATGAGTTTA                  ]




>consensus_4394#0
CGATGCGCATTCAAAGGCATGCATGGTGGATCCTGAAGATAACCAGAACTGGATCTTGAT
ACAGAATTTCGTTCCTCCAATGTCATACTTAAGCTCAAGACTAGGTGAACACAACCCAAT
CATGTTCTTTCTGACTTGGAATTCGAACATGAAACATTTGCTAATTGCAATTTAGACTTG
AAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTG
TACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTTTTTT
TGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGGCGGCCCAATTGACTCAGATAT
TTTGTTGTGTTGCTAGTTTTCCTTCTTGTAGTGTAATGCTATCTCTGTAGACTGTAGTTA
TTCCCATTCACATTTTCTGGGGACACCAGTTGTTGAAATGAGTTTAACTTGGCTTTAAAA
AAAA

clustalw multiple alignements is not computed in this case