Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4394 cluster # 4394       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4394#0 length = 484 sequences # 3  

consensusID : consensus_4394#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 484
fasta sequence
                              [CGATGCGCATTCAAAGGCATGCATGGTGGATCCTGAAGATAACCAGAACTGGATCTTGATACAGAATTTCGTTCCTCCAATGTCATACTTAAGCTCAAGACTAGGTGAACACAACCCAATCATGTTCTTTCTGACTTGGAATTCGAACATGAAACATTTGCTAATT-GCAATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTTTTTTTGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGGCGGCCCAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCT-TGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGGACACCAGTTGTTGAAATGAGTTTAACTTGGCTTTAAAAAAAA]

[+] EMBL BI802210             [CGATGCGCATTCAAAGGCATGCATGGTGGATCCTGAAGATAACCAGAACTGGATCTTGATACAGAATTTCGTTCCTCCAATGTCATACTTAAGCTCAAGACTAGGTGAACACAACCCAATCATGTTCTTTCTGACTTGGAATTCGAACATGAAACATTTGCTAATTGGCAATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTGTTTGTGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGCCGCCCAAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCT TGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGAACACCAGTTGTTGAAATGAGTTTAACTTGGCTTTAAAAAAAA]
[-] EMBL CB966579             [                                                                                                                                                           ATTTGCTAATT GCCATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACCGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTCCCATTTTTTTTTTTTTTTTGTTGTATCTGTTCTCTTAACCCATCCAACTATTCTGGGCGGCCCAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCTNTGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGGACCCCCGTTGTTGAAATGAGTTTA                  ]
[-] EMBL CB964565             [                                                                                                                                                           ATTTGCTAATT GCAATTTAGACTTGAAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTGTACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTTTTTTTGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGGCGGCCCAATTGACTCAGATATTTTGTTGTGTTGCTAGTTTTCCTTCT TGTAGTGTAATGCTATCTCTGTAGACTGTAGTTATTCCCATTCACATTTTCTGGGGACACCAGTTGTTGAAATGAGTTTA                  ]


>consensus_4394#0 CGATGCGCATTCAAAGGCATGCATGGTGGATCCTGAAGATAACCAGAACTGGATCTTGAT ACAGAATTTCGTTCCTCCAATGTCATACTTAAGCTCAAGACTAGGTGAACACAACCCAAT CATGTTCTTTCTGACTTGGAATTCGAACATGAAACATTTGCTAATTGCAATTTAGACTTG AAGCTCAAGGAAGAATATGGAACATAATTTCCTGAGGTCTCATACTTTTGTAGTACAGTG TACTGGGATCATGTTCAACTCTTAGTACATCTAGTTGTATTGCAATTTTTTTTTTTTTTT TGTTGTATCTGTTCTCTTAACCAATCCAACTATTCTGGGCGGCCCAATTGACTCAGATAT TTTGTTGTGTTGCTAGTTTTCCTTCTTGTAGTGTAATGCTATCTCTGTAGACTGTAGTTA TTCCCATTCACATTTTCTGGGGACACCAGTTGTTGAAATGAGTTTAACTTGGCTTTAAAA AAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)