cluster # 4399

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Oryza sativa
cluster # 4399 cluster # 4399 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4399#0 length = 1509 sequences # 3
consensusID : consensus_4399#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1509
fasta sequence
                              [TTTTTGAAAAAAAAGGAGTAATCATCATCAGTTGAAAATTTATTGAGATATACAG-TACAGTCGCCCTATATAGTCCATGTTGTTATGTGTAGGAAATTAAATGGAGGGAGGGCATGCATGGATTGGAATGAATCAAGTAAGGTGGGGGAGGTGGATGTGGAGTGGGACGCCGGGCGTTGGGTGGAGCAGCTGAGCCTCCGGGAGCGTGTCGGCCAGCATGTCCTTGAAGGCCTCCACCGTACCCTCGGTGGCGACGACGGCGGTGAGGAGGCCCTTGGCGTCCACGTCGCCGTTGCTCATTGGGACCACGTACCTTGCCCGCAGCAGGCTGGCCAGCTCCACGGCGTCCTCCTGCCCGGCGACGAGGGTGAAGTTGGCCGGGAGGAGCTGCTTCACGACGGGCGTGATTACCACGTCGGCACGCAGCGCCTCCTTCTCCAGGAAGGACCGGTCGTACACGCAGTGCGGCTCGTAGTACACAAGCCCCTTGGCGTCTTCCTCTTCTTCCTGGAGGAGGAACATGATGTAGCCGTTCTCCGGCCGCTGCCATGGGGGCCCCAGCACGGGCCCAGGGGTGGCCAGTATGCGGACGCCGCCGCCGTTGCAGTTGGTGGATTGCCCGGGCTCCAGGTAGGTGACGTCGCGGAATGGGGTGGGCAGCGCGGCCAGGACGGGGCGCGCGTTGGGGGTGGTGACGACGGGAAGGTCGGGGGCGGCGGCGGCGAGCTGGGCCAGGGTGCGCGCGTGGCAGTGGTCGTCGAGGCTCTGCGTGATGAGGAGCAGGTCGACCCCCGGAGGCTGCAGCACATCTTGGACGCCCAGGTTCTTGAGGCGCTTCTTGGCGGCGTCGAAGAGCCATGGCGCGCCGAAGTCGAGGTTGCCGGCGAGGATGGGGTCGACCAGGATGCGCGCGCCGCCGACCTCCCACACCCAGCTGTTGATCTCCAGGTATGTCAGCTTCACCTGCCTCTGCCTCTGCCTCTGGCTCTTCGTTACACCGGCGCTGCTGCTTCGGACTCGGACGGCTATCGCTCTGGGTCGCTGCGGCGGCGTGGAGGCGGCGAAGGTTCTCCGGCTGCAGCTGCTCCTGCTTATTAGCCGGTGGAGGCCGCCCATGGTGGTGGTGGTGGTGGTGGTGGTGGCCATGGCGAAATTTGCGTTTGCATCTCACTCTAGTGGTGCTCTGCCTCTGCTGCTGAGTAGGTACTCCACCTGTGGCCTGTGGGGCGCCGGCTACGTGTCCAAGTGGCAACCACCCACCCAAGACCAATCCTCCTGCTTTTACTTTTGACCGGCCATTCCTTTTTCTTTTTCTTTTACTATGATCGAAGAGGCCAGGCCGGACTTGCGATTCTCTCAAAAGGAAAAAAAAAGGAATTATTGAAAAACGTTCGACAAATTTCTTTCATAGCTCTCGATTTTTCTGCTAGGCTGAGTTCTTTTCTGTTGAAGTTTTCAACTTGTCACCCTCGTTTTCCACGTGTACATTTTTCAAACTAATAAAACAAT]

[-] EMBL BI802202             [TTTTTGAAAAAAAAGGAGTAATCATCATCAGTTGAAAATTTATTGAGATATACAG TACAGTCGCCCTATATAGTCCATGTTGTTATGTGTAGGAAATTAAATGGAGGGAGGGCATGCATGGATTGGAATGAATCAAGTAAGGTGGGGGAGGTGGATGTGGAGTGGGACGCCGGGCGTTGGGTGGAGCAGCTGAGCCTCCGGGAGCGTGTCGGCCAGCATGTCCTTGAAGGCCTCCACCGTACCCTCGGTGGCGACGACGGCGGTGAGGAGGCCCTTGGCGTCCACGTCGCCGTTGCTCATTGGGACCACGTACCTTGCCCGCAGCAGGCTGGCCAGCTCCACGGCGTCCTCCTGCCCGGCGACGAGGGTGAAGTTGGCCGGGAGGAGCTG TTCACGACGGGCGTGATTACCACGTCGGCACGCAGCGCCTCCTTCTCCAGGAAGGACCGGTCGTACACGCAGTGCGGCTCGTAGTACACAAGCCCCTTGG GTCTTCCTCTTCTTCCTGGAGGAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AK061015             [                             AGTTGAAAATTTATTGAGATATACAGCTACAGTCGCCCTATATAGTCCATGTTGTTATGTGTAGGAAATTAAATGGAGGGAGGGCATGCATGGATTGGAATGAATCAAGTAAGGTGGGGGAGGTGGATGTGGAGTGGGACGCCGGGCGTTGGGTGGAGCAGCTGAGCCTCCGGGAGCGTGTCGGCCAGCATGTCCTTGAAGGCCTCCACCGTACCCTCGGTGGCGACGACGGCGGTGAGGAGGCCCTTGGCGTCCACGTCGCCGTTGCTCATTGGGACCACGTACCTTGCCCGCAGCAGGCTGGCCAGCTCCACGGCGTCCTCCTGCCCGGCGACGAGGGTGAAGTTGGCCGGGAGGAGCTGCTTCACGACGGGCGTGATTACCACGTCGGCACGCAGCGCCTCCTTCTCCAGGAAGGACCGGTCGTACACGCAGTGCGGCTCGTAGTACACAAGCCCCTTGGCGTCTTCCTCTTCTTCCTGGAGGAGGAACATGATGTAGCCGTTCTCCGGCCGCTGCCATGGGGGCCCCAGCACGGGCCCAGGGGTGGCCAGTATGCGGACGCCGCCGCCGTTGCAGTTGGTGGATTGCCCGGGCTCCAGGTAGGTGACGTCGCGGAATGGGGTGGGCAGCGCGGCCAGGACGGGGCGCGCGTTGGGGGTGGTGACGACGGGAAGGTCGGGGGCGGCGGCGGCGAGCTGGGCCAGGGTGCGCGCGTGGCAGTGGTCGTCGAGGCTCTGCGTGATGAGGAGCAGGTCGACCCCCGGAGGCTGCAGCACATCTTGGACGCCCAGGTTCTTGAGGCGCTTCTTGGCGGCGTCGAAGAGCCATGGCGCGCCGAAGTCGAGGTTGCCGGCGAGGATGGGGTCGACCAGGATGCGCGCGCCGCCGACCTCCCACACCCAGCTGTTGATCTCCAGGTATGTCAGCTTCACCTGCCTCTGCCTCTGCCTCTGGCTCTTCGTTACACCGGCGCTGCTGCTTCGGACTCGGACGGCTATCGCTCTGGGTCGCTGCGGCGGCGTGGAGGCGGCGAAGGTTCTCCGGCTGCAGCTGCTCCTGCTTATTAGCCGGTGGAGGCCGCCCATGGTGGTGGTGGTGGTGGTGGTGGTGGCCATGGCGAAATTTGCGT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK064961             [                                                                                                                                       AAGTAAGGTGGGGGAGGTGGATGTGGAGTGGGACGCCGGGCGTTGGGTGGAGCAGCTGAGCCTCCGGGAGCGTGTCGGCCAGCATGTCCTTGAAGGCCTCCACCGTACCCTCGGTGGCGACGACGGCGGTGAGGAGGCCCTTGGCGTCCACGTCGCCGTTGCTCATTGGGACCACGTACCTTGCCCGCAGCAGGCTGGCCAGCTCCACGGCGTCCTCCTGCCCGGCGACGAGGGTGAAGTTGGCCGGGAGGAGCTGCTTCACGACGGGCGTGATTACCACGTCGGCACGCAGCGCCTCCTTCTCCAGGAAGGACCGGTCGTACACGCAGTGCGGCTCGTAGTACACAAGCCCCTTGGCGTCTTCCTCTTCTTCCTGGAGGAGGAACATGATGTAGCCGTTCTCCGGCCGCTGCCATGGGGGCCCCAGCACGGGCCCAGGGGTGGCCAGTATGCGGACGCCGCCGCCGTTGCAGTTGGTGGATTGCCCGGGCTCCAGGTAGGTGACGTTGCGGAATGGGGTGGGCAGCGCGGCCAGGACGGGGCGCGCGTTGGGGGTGGTGACGACGGGAAGGTCGGGGGCGGCGGCGGCGAGCTGGGCCAGGGTGCGCGCGTGGCAGTGGTCGTCGAGGCTCTGCGTGATGAGGAGCAGGTCGACCCCCGGAGGCTGCAGCACATCTTGGACGCCCAGGTTCTTGAGGCGCTTCTTGGCGGCGTCGAAGAGCCATGGCGCGCCGAAGTCGAGGTTGCCGGCGAGGATGGGGTCGACCAGGATGCGCGCGCCGCCGACCTCCCACACCCAGCTGTTGATCTCCAGGTATGTCAGCTTCACCTGCCTCTGCCTCTGCCTCTGGCTCTTCGTTACACCGGCGCTGCTGCTTCGGACTCGGACGGCTATCGCTCTGGGTCGCTGCGGCGGCGTGGAGGCGGCGAAGGTTCTCCGGCTGCAGCTGCTCCTGCTTATTAGCCGGTGGAGGCCGCCCATGGTGGTGGTGGTGGTGGTGGTGGTGGCCATGGCGAAATTTGCGTTTGCATCTCACTCTAGTGGTGCTCTGCCTCTGCTGCTGAGTAGGTACTCCACCTGTGGCCTGTGGGGCGCCGGCTACGTGTCCAAGTGGCAACCACCCACCCAAGACCAATCCTCCTGCTTTTACTTTTGACCGGCCATTCCTTTTTCTTTTTCTTTTACTATGATCGAAGAGGCCAGGCCGGACTTGCGATTCTCTCAAAAGGAAAAAAAAAGGAATTATTGAAAAACGTTCGACAAATTTCTTTCATAGCTCTCGATTTTTCTGCTAGGCTGAGTTCTTTTCTGTTGAAGTTTTCAACTTGTCACCCTCGTTTTCCACGTGTACATTTTTCAAACTAATAAAACAAT]




>consensus_4399#0
TTTTTGAAAAAAAAGGAGTAATCATCATCAGTTGAAAATTTATTGAGATATACAGTACAG
TCGCCCTATATAGTCCATGTTGTTATGTGTAGGAAATTAAATGGAGGGAGGGCATGCATG
GATTGGAATGAATCAAGTAAGGTGGGGGAGGTGGATGTGGAGTGGGACGCCGGGCGTTGG
GTGGAGCAGCTGAGCCTCCGGGAGCGTGTCGGCCAGCATGTCCTTGAAGGCCTCCACCGT
ACCCTCGGTGGCGACGACGGCGGTGAGGAGGCCCTTGGCGTCCACGTCGCCGTTGCTCAT
TGGGACCACGTACCTTGCCCGCAGCAGGCTGGCCAGCTCCACGGCGTCCTCCTGCCCGGC
GACGAGGGTGAAGTTGGCCGGGAGGAGCTGCTTCACGACGGGCGTGATTACCACGTCGGC
ACGCAGCGCCTCCTTCTCCAGGAAGGACCGGTCGTACACGCAGTGCGGCTCGTAGTACAC
AAGCCCCTTGGCGTCTTCCTCTTCTTCCTGGAGGAGGAACATGATGTAGCCGTTCTCCGG
CCGCTGCCATGGGGGCCCCAGCACGGGCCCAGGGGTGGCCAGTATGCGGACGCCGCCGCC
GTTGCAGTTGGTGGATTGCCCGGGCTCCAGGTAGGTGACGTCGCGGAATGGGGTGGGCAG
CGCGGCCAGGACGGGGCGCGCGTTGGGGGTGGTGACGACGGGAAGGTCGGGGGCGGCGGC
GGCGAGCTGGGCCAGGGTGCGCGCGTGGCAGTGGTCGTCGAGGCTCTGCGTGATGAGGAG
CAGGTCGACCCCCGGAGGCTGCAGCACATCTTGGACGCCCAGGTTCTTGAGGCGCTTCTT
GGCGGCGTCGAAGAGCCATGGCGCGCCGAAGTCGAGGTTGCCGGCGAGGATGGGGTCGAC
CAGGATGCGCGCGCCGCCGACCTCCCACACCCAGCTGTTGATCTCCAGGTATGTCAGCTT
CACCTGCCTCTGCCTCTGCCTCTGGCTCTTCGTTACACCGGCGCTGCTGCTTCGGACTCG
GACGGCTATCGCTCTGGGTCGCTGCGGCGGCGTGGAGGCGGCGAAGGTTCTCCGGCTGCA
GCTGCTCCTGCTTATTAGCCGGTGGAGGCCGCCCATGGTGGTGGTGGTGGTGGTGGTGGT
GGCCATGGCGAAATTTGCGTTTGCATCTCACTCTAGTGGTGCTCTGCCTCTGCTGCTGAG
TAGGTACTCCACCTGTGGCCTGTGGGGCGCCGGCTACGTGTCCAAGTGGCAACCACCCAC
CCAAGACCAATCCTCCTGCTTTTACTTTTGACCGGCCATTCCTTTTTCTTTTTCTTTTAC
TATGATCGAAGAGGCCAGGCCGGACTTGCGATTCTCTCAAAAGGAAAAAAAAAGGAATTA
TTGAAAAACGTTCGACAAATTTCTTTCATAGCTCTCGATTTTTCTGCTAGGCTGAGTTCT
TTTCTGTTGAAGTTTTCAACTTGTCACCCTCGTTTTCCACGTGTACATTTTTCAAACTAA
TAAAACAAT
clustalw multiple alignements is not computed in this case