cluster # 440

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Oryza sativa
cluster # 440 cluster # 440 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_440#0 length = 530 sequences # 2

consensusID : consensus_440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 530
fasta sequence

                              [AGATATGTGTGGATGAAGTGTGATTTGAGCTAACTCCCCTCATGGGAGCACACACAATCATTCTCATTCAGTCACTGTTGCTTAAGTGTATTTCTTTCGTTCTTTCTTATGGGAGTGAGTGCCCCAAAAGTGAGTGAATGTAGGGAATCAAACCAAGTAGAGGTACTGTGCTCTTCAGGTTTGGGAAGAAAAATGGGAACGGCAAGGGACCATGTGTGCAGGCATTGGAAAAGGGTGCCCCCCATTCTGATCTGATCAGATATATATTCAGATCAGCAGAGCCCCTGATAAAAGTCATGGAGGAACAGTTATCCACATCTAAAGCTATAGCTGTGTATTAATGTGTATCT-CAGTCTACACCA-CCTTATGAAACATGCATGCATGCATGCATGCCTTTGAGATTTGATTTTTTACTTCTCAGATTCTTTTGTACAAATGCAAAAAGAAAATGATCCTTTGGAATCTAGCATTTGTTACATATTTACAATATAAAGTGCTATACTTGTTTACTTTTCATTCTAAAAAAAAAA]

[+] EMBL BI811825             [AGATATGTGTGGATGAAGTGTGATTTGAGCTAACTCCCCTCATGGGAGCACACACAATCATTCTCATTCAGTCACTGTTGCTTAAGTGTATTTCTTTCGTTCTTTCTTATGGGAGTGAGTGCCCCAAAAGTGAGTGAATGTAGGGAATCAAACCAAGTAGAGGTACTGTGCTCTTCAGGTTTGGGAAGAAAAATGGGAACGGCAAGGGACCATGTGTGCAGGCATTGGAAAAGGGTGCCCCCCATTCTGATCTGATCAGATATATATTCAGATCAGCAGAGCCCCTGATAAAAGTCATGGAGGAACAGTTATCCACATCTAAAGCTATAGCTGTGTATTAATGTGTATCT CAGTCTACACCA CCTTATGAAACATGCATGCATGCATGCATGCCTTTGAGATTTGATTTTTTACTTCTCAGATTCTTTTGTACAAATGCAAAAAGAAAATGATCCTTTGGAATCTAGCATTTGTTACATATTTACAATATAAAGTGCTATACTTGTTTACTTTTCATTCTAAAAAAAAAA]
[+] EMBL BI811922             [                                                        ATCATTCTCATTCAGTCACT TTGCTTAA T TATTTCTTTCGTTCTTTCTTATGGGAGTGAGTG CCCAAAAGTGAGTGAATGTAGGGAATCAAA CAAGTAGAGGTACTGTGCTCTTCAGGTTTGGGAAGAAAAATGGGAACGGCAAGGGACCATGTGTGCAGGCATTGGAAAAGGGTG CCCCCATTCTGATCTGATCAGATATATATTCAGATCAGCAGAGCCCCTGATAAAAGTCATGGAGGAACAGTTATCCACATCTAAAGCTATAGCTGTGTATTAATGTGTATCTGCAGTCTACACCAGCCTTATGAAACATGCATGCATGCATGCATGCCTTTGAGATTTGATTTTTTACTTCTCAGATTCTTTTGTACAAATGCAAAAAGAAAATGATCCTTTGGAATCTAGCATTTGTTACATATTTACAATATAAAGTGCTATACTTGTTTACTTTTCATTCTAAAAAAAAAA]




>consensus_440#0
AGATATGTGTGGATGAAGTGTGATTTGAGCTAACTCCCCTCATGGGAGCACACACAATCA
TTCTCATTCAGTCACTGTTGCTTAAGTGTATTTCTTTCGTTCTTTCTTATGGGAGTGAGT
GCCCCAAAAGTGAGTGAATGTAGGGAATCAAACCAAGTAGAGGTACTGTGCTCTTCAGGT
TTGGGAAGAAAAATGGGAACGGCAAGGGACCATGTGTGCAGGCATTGGAAAAGGGTGCCC
CCCATTCTGATCTGATCAGATATATATTCAGATCAGCAGAGCCCCTGATAAAAGTCATGG
AGGAACAGTTATCCACATCTAAAGCTATAGCTGTGTATTAATGTGTATCTCAGTCTACAC
CACCTTATGAAACATGCATGCATGCATGCATGCCTTTGAGATTTGATTTTTTACTTCTCA
GATTCTTTTGTACAAATGCAAAAAGAAAATGATCCTTTGGAATCTAGCATTTGTTACATA
TTTACAATATAAAGTGCTATACTTGTTTACTTTTCATTCTAAAAAAAAAA

clustalw multiple alignements is not computed in this case