cluster # 4403

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Oryza sativa
cluster # 4403 cluster # 4403 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4403#0 length = 490 sequences # 3

consensusID : consensus_4403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 490
fasta sequence

                              [CACACGGCAAAAGCTCCCGCACCAAAAAGAGA---A-AAAAAAACACGCAAAAGC-GCATC-CCTTTCTCGTGCTCC-GCC-GCCGGC-GAGATGTGCTGCTGCCCGAGCAAGGCGTGCTGCATCTGCACGCTCATCGTGCTGGTGCTGGTC-CCGTCGGCATCGTCTTCGGCTTCGGCGTCTACACCCGCGGCTTCCACAAGCTCACCAGCAGCATCCACGACGCCTCCTCCACCAGCCAGCCGGCTCCACTCCGCGCCCACCAATTCTTCGC-CCGCCGCCGCCGTACTAGCTAGCTAGCCCCTCCTCCTCTTCTCTTCTCTCCCTCCCGAGATCTATCCATGGGGGATATTAGGGGAGACCGGGAGTAGTAGTAGTACTAATCGTTTGTAAAGAAGAATTCCCCGGATTTGATTTTATTTTATTTCCACCTGCATTTTGGTTGCAATCCATGGATTGATTGATTAATGGTTGGTCTCTTGTTCCTCCCAAAAAAAAAA]

[+] EMBL AK062866             [CACACGGCAAAAGCTCCCGCACCAAAAAGAGA   A AAAAAAACACGCAAAAGC GCATCGCCTTTCTCGTGCTCC GCC GCCGGC GAGATGTGCTGCTGCCCGAGCAAGGCGTGCTGCATCTGCACGCTCATCGTGCTGGTGCTGGTCGCCGTCGGCATCGTCTTCGGCTTCGGCGTCTACACCCGCGGCTTCCACAAGCTCACCAGCAG                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI795913             [               CCCGCACCATAAAGAGATATATATAATAACACGCAAAAGCGGCATC CCTTTCTCGTGCTCCAGCCAGCCGGCAGAGATGTGCTGCTGCCCGAGCAAGGCGTGCTGCATCTGCACGCTCATCGTGCTGGTGCTGGTC CCGTCGGCATCGTCTTCGGCTTCGGCGTCTACACCCGCGGCTTCCACAAGCTCACCAGCAGCATCCACGACGCCTCCTCCACCAGCCAGCCGGCTCCACTCCGCGCCCACCAATTCTTCGC CCGCCGCCGCCGTACTAGCTAGCTAGCCCCTCCTCCTCTTCTCTTCTCTCCCTCCCGAGATCTATCCATGGGGGATATTAGGGGAGACCGGGAGTAGTAGTAGTACTAATCGTTTGTAAAGAAGAATTCCC                                                                                               ]
[+] EMBL BI801620             [                                                                                                                                                                                                                                                                CGCCCACCAATTCTTCGCGCCGCCGCCGCCGTACTAGCTAGCTAGCCCCTCCTCCTCTTCTCTTCTCTCCCTCCCGAGATCTATCCATGGGGGATAGTAGGGGAGACCGGGAGTAGTAGTAGTACTAATCGTTTGTAAAGAAGAATTCGCCGGATTTGATTTTATTTTATTTCCACCTGCATTTTGGTTGCAATCCATGGATTGATTGATTAATGGTTGGTCTCTTGTTCCTCCCAAAAAAAAAA]




>consensus_4403#0
CACACGGCAAAAGCTCCCGCACCAAAAAGAGAAAAAAAAACACGCAAAAGCGCATCCCTT
TCTCGTGCTCCGCCGCCGGCGAGATGTGCTGCTGCCCGAGCAAGGCGTGCTGCATCTGCA
CGCTCATCGTGCTGGTGCTGGTCCCGTCGGCATCGTCTTCGGCTTCGGCGTCTACACCCG
CGGCTTCCACAAGCTCACCAGCAGCATCCACGACGCCTCCTCCACCAGCCAGCCGGCTCC
ACTCCGCGCCCACCAATTCTTCGCCCGCCGCCGCCGTACTAGCTAGCTAGCCCCTCCTCC
TCTTCTCTTCTCTCCCTCCCGAGATCTATCCATGGGGGATATTAGGGGAGACCGGGAGTA
GTAGTAGTACTAATCGTTTGTAAAGAAGAATTCCCCGGATTTGATTTTATTTTATTTCCA
CCTGCATTTTGGTTGCAATCCATGGATTGATTGATTAATGGTTGGTCTCTTGTTCCTCCC
AAAAAAAAAA

clustalw multiple alignements is not computed in this case