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Oryza sativa
cluster # 4410 cluster # 4410       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4410#0 length = 2096 sequences # 3  

consensusID : consensus_4410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2096
fasta sequence
                              [CAGAACAGAAATCAGAGAACTGAGGACAGAAGGCAAGTAGGAAGAATCTGAGCTGTCTGAATGGAAGGGAAAAACAACTAGGGGGAGAAAAGGAAAGGATTATCCAAGCTTTCGTGTATCATCCGAGTGTCCCTTGTATGCAATGGGTTTGATCAATAGAGGGGTCTTCTTCAAGATCTTGGCCTTCCTCTGCTTCATCAGATCATCTCAAGGAAGAAATCATTTTACCACATTGGATCTCCCTCCCCTACTGAAGGCAAGCAGTTTCTCCAGAATACAGCATGAGGCATATGACTACATCATTGTTGGAGGTGGCACAGCTGGATGCCCATTGGCAGCAACGTTGTCCCAGAAGTACAAGGTGCTCTTGCTGGAAAGAGGAGGGTCTCCTTACGGCAACCGGAACATCTCACATCTTGAGAACTTCCACATTTGCTTGGCAGATGACTCGCCAAATTCACCATCTCAGGGATTTATCTCCACTGATGGTGTCATCAATGCCCGGGCAAAGGTTCTAGGTGGTGGAACTAGTGTCAATGCTGGTTTCTACAGCCGAGCTGACCCAAGCTTTGTTCAAGACGCAGGCTGGGATGCAGAGTTGGTAAACCAATCGTACCCTTGGATCGAAGAGAGGATTGTTTATTGGCCCAATATTACACCGTGGCAAGCTGCACTGCGGGACGGGCTGCTTGAAGCAGGGGTCTCACCTTACAATGGATACAGCTATGATCATCTCTTTGGAACAAAGGTCGGGGGAACAATCTTTGATGAGGCTGGGTACAGGCACACTGCTGCTGACCTCCTTGCTGCTGGAAATCATAACAACCTCAGGGTTCTCCTTCATGCTAGTGTGACCAGAATAATTTTCAACACAGAACAAGAGCACAGGAAGCCAAGGACCATTGGTGTTGAATTCAAGGATGAGAATGGGGGGCAGCAGCATGCCTTCCTTACCCGAAACAGAGACAGCGAGATTATCATCTCTGCTGGTGCAATTGGCAGTCCCCAGCTATTGTTGCTTAGTGGAATTGGACCCAGAAAGGAACTTAAAAAGCATAACATTTCTGTAGTCCTTCGCAACGAACATGTGGGTAAAGGGATGTCAGATAATCCAATGAATTCCATCTTTATACCTACCAAGGATGCCCCTAAGCAATCACTGATTCAGACTGTTGGAATAACCGACGGCGGGGCGTTCATAGAAGCCAGCAGTGGTTTCAGCCAGTCACCAGATAGTATCCAGTGCCACCATGGAATCATGTCCGCTGAGATTGGGCAGCTGTCAACGATTCCCCCAAAGCAAAGAAATCTAGATGCAGTCAAGAAGTATGTACATAAAAAATATAACCTACCCAAAGAAGTATTCAGTGGGGGTTTTATACTTTCGAAGATTGATGGTCCATTGTCTACTGGTAATCTAGTTCTTGTGGATACTGACATCAATAGCAACCCCACGGTTACCTTCAACTACTTCCAGCACCCAAAGGATCTCAGTCGGTGTGTCTATGGGATCAAGACCATAGAGAGAATACTGAAGACAAACCATTTCACTAATTTTACCCTCAATGGTGGTGGATATCCAATGGAAGTGGTGCTCAACATGAGTGTAACAGCAAACATAAACTTGATACCCAAGCACACAAATGACAGCACATCCATGGAGCAGTTTTGCAGAGACACAGTGGTCACCATCTGGCATTACCATGGCGGATGCCATGTGGGCAAGGTGGTTGACCAACAATACCGTGTGATTGGTGTCTCAGGCCTTCGTGTGATCGATGGGTCGACCTTATTTAGGTCACCAGGAACCAACCCGCAAGCCACAGTCATGATGATGGGCAGATACATGGGAGTGAAGATTCTAAGAGGAAGATTAGGACGAGCTGCTGGAGTATAACTGATTCTTGGACCTTATTGATTATGTAAGAATGTGACTTAGGAAAAGAAAAGTATATAGTAATTTTTGAAGCAATTCAATATCATATCACCACAGAAAGAAAATTAGGAGTTTTCGTTTGTGTTCTAGATGTGGAAATCTATGGCATGTAATATCATCTATTGACACCATTGTTTCTGCATTATGAACAAGTAAATTA]

[+] EMBL AK068301             [CAGAACAGAAATCAGAGAACTGAGGACAGAAGGCAAGTAGGAAGAATCTGAGCTGTCTGAATGGAAGGGAAAAACAACTAGGGGGAGAAAAGGAAAGGATTATCCAAGCTTTCGTGTATCATCCGAGTGTCCCTTGTATGCAATGGGTTTGATCAATAGAGGGGTCTTCTTCAAGATCTTGGCCTTCCTCTGCTTCATCAGATCATCTCAAGGAAGAAATCATTTTACCACATTGGATCTCCCTCCCCTACTGAAGGCAAGCAGTTTCTCCAGAATACAGCATGAGGCATATGACTACATCATTGTTGGAGGTGGCACAGCTGGATGCCCATTGGCAGCAACGTTGTCCCAGAAGTACAAGGTGCTCTTGCTGGAAAGAGGAGGGTCTCCTTACGGCAACCGGAACATCTCACATCTTGAGAACTTCCACATTTGCTTGGCAGATGACTCGCCAAATTCACCATCTCAGGGATTTATCTCCACTGATGGTGTCATCAATGCCCGGGCAAAGGTTCTAGGTGGTGGAACTAGTGTCAATGCTGGTTTCTACAGCCGAGCTGACCCAAGCTTTGTTCAAGACGCAGGCTGGGATGCAGAGTTGGTAAACCAATCGTACCCTTGGATCGAAGAGAGGATTGTTTATTGGCCCAATATTACACCGTGGCAAGCTGCACTGCGGGACGGGCTGCTTGAAGCAGGGGTCTCACCTTACAATGGATACAGCTATGATCATCTCTTTGGAACAAAGGTCGGGGGAACAATCTTTGATGAGGCTGGGTACAGGCACACTGCTGCTGACCTCCTTGCTGCTGGAAATCATAACAACCTCAGGGTTCTCCTTCATGCTAGTGTGACCAGAATAATTTTCAACACAGAACAAGAGCACAGGAAGCCAAGGACCATTGGTGTTGAATTCAAGGATGAGAATGGGGGGCAGCAGCATGCCTTCCTTACCCGAAACAGAGACAGCGAGATTATCATCTCTGCTGGTGCAATTGGCAGTCCCCAGCTATTGTTGCTTAGTGGAATTGGACCCAGAAAGGAACTTAAAAAGCATAACATTTCTGTAGTCCTTCGCAACGAACATGTGGGTAAAGGGATGTCAGATAATCCAATGAATTCCATCTTTATACCTACCAAGGATGCCCCTAAGCAATCACTGATTCAGACTGTTGGAATAACCGACGGCGGGGCGTTCATAGAAGCCAGCAGTGGTTTCAGCCAGTCACCAGATAGTATCCAGTGCCACCATGGAATCATGTCCGCTGAGATTGGGCAGCTGTCAACGATTCCCCCAAAGCAAAGAAATCTAGATGCAGTCAAGAAGTATGTACATAAAAAATATAACCTACCCAAAGAAGTATTCAGTGGGGGTTTTATACTTTCGAAGATTGATGGTCCATTGTCTACTGGTAATCTAGTTCTTGTGGATACTGACATCAATAGCAACCCCACGGTTACCTTCAACTACTTCCAGCACCCAAAGGATCTCAGTCGGTGTGTCTATGGGATCAAGACCATAGAGAGAATACTGAAGACAAACCATTTCACTAATTTTACCCTCAATGGTGGTGGATATCCAATGGAAGTGGTGCTCAACATGAGTGTAACAGCAAACATAAACTTGATACCCAAGCACACAAATGACAGCACATCCATGGAGCAGTTTTGCAGAGACACAGTGGTCACCATCTGGCATTACCATGGCGGATGCCATGTGGGCAAGGTGGTTGACCAACAATACCGTGTGATTGGTGTCTCAGGCCTTCGTGTGATCGATGGGTCGACCTTATTTAGGTCACCAGGAACCAACCCGCAAGCCACAGTCATGATGATGGGCAGATACATGGGAGTGAAGATTCTAAGAGGAAGATTAGGACGAGCTGCTGGAGTATAACTGATTCTTGGACCTTATTGATTATGTAAGAATGTGACTTAGGAAAAGAAAAGTATATAGTAATTTTTGAAGCAATTCAATATCATATCACCACAGAAAGAAAATTAGGAGTTTTCGTTTGTGTTCTAGATGTGGAAATCTATGGCATGTAATATCATCTATTGACACCATTGTTTCTGCATTATGAACAAGTAAATTA]
[+] EMBL CB639953             [                                 CAAGTAGGAAGAATCTGAGCTGTCTGAATGGAAGGGAAAAACAACTAGGGGGAGAAAAGGAAAGGATTATCCAAGCTTTCGTGTATCATCCGAGTGTCCCTTGTATGCAATGGGTTTGATCAATAGAGGGGTCTTCTTCAAGATCTTGGCCTTCCTCTGCTTCATCAGATCATCTCAAGGAAGAAATCATTTTACCACATTGGATCTCCCTCCCCTACTGAAGGCAAGCAGTTTCTCCAGAATACAGCATGAGGCATATGACTACATCATTGTTGGAGGTGGCACAGCTGGATGCCCATTGGCAGCAACGTTGTCCCAGAAGTACAAGGTGCTCTTGCTGGAAAGAGGAGGGTCTCCTTACGGCAACCGGAACATCTCACATCTTGAGAACTTCCACATTTGCTTGGCAGATGACTCGCCAAATTCACCATCTCAGGGATTTATCTCCACTGATGGTGTCATCAATGCCCGGGCAAAGGTTCTAGGTGGTGGAACTAGTGTCAATGCTGGTTTCTACAGCCGAGCTGACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF196561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTGCTGGTGCAATTGGCAGTCCCCAGCTATTGTTGCTTAGTGGAATTGGACCCAGAAAGGAACTTAAAAAGCATAACATTTCTGTAGTCCTTCGCAACGAACATGTGGGTAAAGGGATGTCAGATAATCCAATGAATTCCATCTTTATACCTACCAAGGATGCCCCTAAGCAATCACTGATTCAGACTGTTGGAATAACCGACGGCGGGGCGTTCATAGAAGCCAGCAGTGGTTTCAGCCAGTCACCAGATAGTATCCAGTGCCACCATGGAATCATGTCCGCTGAGATTGGGCAGCTGTCAACGATTCCCCCAAAGCAAAGAAATCTAGATGCAGTCAAGAAGTATGTACATAAAAAATATAACCTACCCAAAGAAGTATTCAGTGGGGGTTTTATACTTTCGAAGATTGATGGTCCATTGTCTACTGGTAATCTAGTTCTTGTGGATACTGACATCAATAGCAACCCCACGGTTACCTTCAACTACTTCCAGCACCCAAAGGATCTCAGTCGGTGTGTCTATGGGATCAAGACCATAGAGAGAATACTGNNGACNNNNCATTTCACTAATTTTACCCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_4410#0 CAGAACAGAAATCAGAGAACTGAGGACAGAAGGCAAGTAGGAAGAATCTGAGCTGTCTGA ATGGAAGGGAAAAACAACTAGGGGGAGAAAAGGAAAGGATTATCCAAGCTTTCGTGTATC ATCCGAGTGTCCCTTGTATGCAATGGGTTTGATCAATAGAGGGGTCTTCTTCAAGATCTT GGCCTTCCTCTGCTTCATCAGATCATCTCAAGGAAGAAATCATTTTACCACATTGGATCT CCCTCCCCTACTGAAGGCAAGCAGTTTCTCCAGAATACAGCATGAGGCATATGACTACAT CATTGTTGGAGGTGGCACAGCTGGATGCCCATTGGCAGCAACGTTGTCCCAGAAGTACAA GGTGCTCTTGCTGGAAAGAGGAGGGTCTCCTTACGGCAACCGGAACATCTCACATCTTGA GAACTTCCACATTTGCTTGGCAGATGACTCGCCAAATTCACCATCTCAGGGATTTATCTC CACTGATGGTGTCATCAATGCCCGGGCAAAGGTTCTAGGTGGTGGAACTAGTGTCAATGC TGGTTTCTACAGCCGAGCTGACCCAAGCTTTGTTCAAGACGCAGGCTGGGATGCAGAGTT GGTAAACCAATCGTACCCTTGGATCGAAGAGAGGATTGTTTATTGGCCCAATATTACACC GTGGCAAGCTGCACTGCGGGACGGGCTGCTTGAAGCAGGGGTCTCACCTTACAATGGATA CAGCTATGATCATCTCTTTGGAACAAAGGTCGGGGGAACAATCTTTGATGAGGCTGGGTA CAGGCACACTGCTGCTGACCTCCTTGCTGCTGGAAATCATAACAACCTCAGGGTTCTCCT TCATGCTAGTGTGACCAGAATAATTTTCAACACAGAACAAGAGCACAGGAAGCCAAGGAC CATTGGTGTTGAATTCAAGGATGAGAATGGGGGGCAGCAGCATGCCTTCCTTACCCGAAA CAGAGACAGCGAGATTATCATCTCTGCTGGTGCAATTGGCAGTCCCCAGCTATTGTTGCT TAGTGGAATTGGACCCAGAAAGGAACTTAAAAAGCATAACATTTCTGTAGTCCTTCGCAA CGAACATGTGGGTAAAGGGATGTCAGATAATCCAATGAATTCCATCTTTATACCTACCAA GGATGCCCCTAAGCAATCACTGATTCAGACTGTTGGAATAACCGACGGCGGGGCGTTCAT AGAAGCCAGCAGTGGTTTCAGCCAGTCACCAGATAGTATCCAGTGCCACCATGGAATCAT GTCCGCTGAGATTGGGCAGCTGTCAACGATTCCCCCAAAGCAAAGAAATCTAGATGCAGT CAAGAAGTATGTACATAAAAAATATAACCTACCCAAAGAAGTATTCAGTGGGGGTTTTAT ACTTTCGAAGATTGATGGTCCATTGTCTACTGGTAATCTAGTTCTTGTGGATACTGACAT CAATAGCAACCCCACGGTTACCTTCAACTACTTCCAGCACCCAAAGGATCTCAGTCGGTG TGTCTATGGGATCAAGACCATAGAGAGAATACTGAAGACAAACCATTTCACTAATTTTAC CCTCAATGGTGGTGGATATCCAATGGAAGTGGTGCTCAACATGAGTGTAACAGCAAACAT AAACTTGATACCCAAGCACACAAATGACAGCACATCCATGGAGCAGTTTTGCAGAGACAC AGTGGTCACCATCTGGCATTACCATGGCGGATGCCATGTGGGCAAGGTGGTTGACCAACA ATACCGTGTGATTGGTGTCTCAGGCCTTCGTGTGATCGATGGGTCGACCTTATTTAGGTC ACCAGGAACCAACCCGCAAGCCACAGTCATGATGATGGGCAGATACATGGGAGTGAAGAT TCTAAGAGGAAGATTAGGACGAGCTGCTGGAGTATAACTGATTCTTGGACCTTATTGATT ATGTAAGAATGTGACTTAGGAAAAGAAAAGTATATAGTAATTTTTGAAGCAATTCAATAT CATATCACCACAGAAAGAAAATTAGGAGTTTTCGTTTGTGTTCTAGATGTGGAAATCTAT GGCATGTAATATCATCTATTGACACCATTGTTTCTGCATTATGAACAAGTAAATTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)