cluster # 4418

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Oryza sativa
cluster # 4418 cluster # 4418 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4418#0 length = 858 sequences # 3

consensusID : consensus_4418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 858
fasta sequence

                              [AAACACGCACGCACACCACTACTCCATCAGCAGCAGCCAGCGAGCCCGCGCCGCAGCCACCCGCGCGCGCGCGCGGCCGGTGAGGTGTGTGAGATAGATCGTCGAGCGCGCGTACGTCGATCGTCGAGGCTGGCCGCCGCCGCGAGGATACCGGCGCCGGTGCGCGCGGTGATGGCGTGGTGGCGGAAGA-AG-GTCGTCTTCCCGGCGC-GCCGCGCGTGGGCCGCCGTCTCCACCCGC-GTCCGCGC-CCGCAAG-CCAGGCAGTGGAGGCAGCATACTGAAGCTTCACGAGGATGTGCAAACCTGTGGATACAAGGACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGCTGGAGGAATCACGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGGCCGCCGTCGGCGTGGTCCAGCCGGTCGTCGTCGATCGCGGCCGCGCAATAGAGACGTCGACGGCCATGACACGGACACGCGGATTGGCAGACACCGGCTAATAATAAGAAGTTAAGAACACCAACTTTAGTACTACGTGATAGCTATTAGTTTCGTACTTAAATGTCTAATCGCAGTTGTCAGGCATCATCATCCATCCCCCTGCCCGTCTATCCGGCAAAAGAGCGAAAATTTTCGGTAGCATCAGGTCATAAGCATCTGAAAGTCTGAAAAAGAAAAACTGTACATA-CTACATGGCGGTTGCGCTGAATTCTCGCAAACTCTGGAGGAAAAGATGGAGTAAGA-GGGGTTTATTTTTCAAGTGTATTTTCTATCCTGTTTACCTATGATTCATGATGTATCGTTTTATGTTCTGTTGAAGAATCTCTGAAATGAAAGATTTTTCAGTAAAAAAAAACA]

[+] EMBL AK107076             [AAACACGCACGCACACCACTACTCCATCAGCAGCAGCCAGCGAGCCCGCGCCGCAGCCACCCGCGCGCGCGCGCGGCCGGTGAGGTGTGTGAGATAGATCGTCGAGCGCGCGTACGTCGATCGTCGAGGCTGGCCGCCGCCGCGAGGATACCGGCGCCGGTGCGCGCGGTGATGGCGTGGTGGCGGAAGA AG GTCGTCTTCCCGGCGC GCCGCGCGTGGGCCGCCGTCTCCACCCGC GTCCGCGC CCGCAAG CCAGGCAGTGGAGGCAGCATACTGAAGCTTCACGAGGATGTGCAAACCTGTGGATACAAGGACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGCTGGAGGAATCACGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGGCCGCCGTCGGCGTGGTCCAGCCGGTCGTCGTCGATCGCGGCCGCGCAATAGAGACGTCGACGGCCATGACACGGACACGCGGATTGGCAGACACCGGCTAATAATAAGAAGTTAAGAACACCAACTTTAGTACTACGTGATAGCTATTAGTTTCGTACTTAAATGTCTAATCGCAGTTGTCAGGCATCATCATCCATCCCCCTGCCCGTCTATCCGGCAAAAGAGCGAAAATTTTCGGTAGCATCAGGTCATAAGCATCTGAAAGTCTGAAAAAGAAAAACTGTACATA CTACATGGCGGTTGCGCTGAATTCTCGCAAACTCTGGAGGAAAAGATGGAGTAAGA GGGGTTTATTTTTCAAGTGTATTTTCTATCCTGTTTACCTATGATTCATGATGTATCGTTTTATGTTCTGTTGAAGAATCTCTGAAATGAAAGATTTTTCAG            ]
[+] EMBL BI795829             [                                                                                                                                                                               aGTGGTGGCGGAAGATAGTGTCGTCTTCCCGGCGCAGCCGCGCGTGGCACACCGTCTCCACCCGCAGTCCGCGCACAGCAAGTCCAGGCAGTGGAGGCAGCATACTGAAGCTTCACGAGGATGTGCAAACCTGTGGATACAAGGACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGCTGGAGGAATCACGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGCCCGCTGTCGGCGTGGTCCAGCCGGTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF312412             [                                                                                                                                                                                                                                                                                                                               ACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGCTGGAGGAATCACGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGGCCGCCGTCGGCGTGGTCCAGCCGGTCGTCGTCGATCGCGGCCGTGCAATAGAGACGTCGACGGCCATGACACGGACACGCGGATTGGCAGACACCGGCTAATAATAAGAAGTTAAGAACACCAACTTTAGTACTACGTGATAGCTATTAGTTTCGTACTTAAATGTCTAATCGCAGTTGTCAGGCATCATCATCCATCCCCCTGCCCGTCTATCCGGCAAAAGAGCGAAAATTTTCGGTAGCATCAGGTCATAAGCATCTGAAAGTCTGAAAAAGAAAAACTGTACATANCTACATGGCGGTTGCGCTGAATTCTCGCAAACTCTGGAGGAAAAGATGGAGTAAGAGGGGGTTTATTTTTCAAGTGTATTTTCTATCCTGTTTACCTATGATTCATGATGTATCGTTTTATGTTCTGTTGGAGAATCTCTGAAATGAAAGATTTTTCAGTAAAAAAAAACA]




>consensus_4418#0
AAACACGCACGCACACCACTACTCCATCAGCAGCAGCCAGCGAGCCCGCGCCGCAGCCAC
CCGCGCGCGCGCGCGGCCGGTGAGGTGTGTGAGATAGATCGTCGAGCGCGCGTACGTCGA
TCGTCGAGGCTGGCCGCCGCCGCGAGGATACCGGCGCCGGTGCGCGCGGTGATGGCGTGG
TGGCGGAAGAAGGTCGTCTTCCCGGCGCGCCGCGCGTGGGCCGCCGTCTCCACCCGCGTC
CGCGCCCGCAAGCCAGGCAGTGGAGGCAGCATACTGAAGCTTCACGAGGATGTGCAAACC
TGTGGATACAAGGACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGCTGGAGGAATCA
CGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGGCCGCCGTCGGCGTGGTCCAGC
CGGTCGTCGTCGATCGCGGCCGCGCAATAGAGACGTCGACGGCCATGACACGGACACGCG
GATTGGCAGACACCGGCTAATAATAAGAAGTTAAGAACACCAACTTTAGTACTACGTGAT
AGCTATTAGTTTCGTACTTAAATGTCTAATCGCAGTTGTCAGGCATCATCATCCATCCCC
CTGCCCGTCTATCCGGCAAAAGAGCGAAAATTTTCGGTAGCATCAGGTCATAAGCATCTG
AAAGTCTGAAAAAGAAAAACTGTACATACTACATGGCGGTTGCGCTGAATTCTCGCAAAC
TCTGGAGGAAAAGATGGAGTAAGAGGGGTTTATTTTTCAAGTGTATTTTCTATCCTGTTT
ACCTATGATTCATGATGTATCGTTTTATGTTCTGTTGAAGAATCTCTGAAATGAAAGATT
TTTCAGTAAAAAAAAACA

clustalw multiple alignements is not computed in this case