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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4419 cluster # 4419       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4419#0 length = 522 sequences # 3  

consensusID : consensus_4419#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 522
fasta sequence
                              [GCTCATCGAATCCAAGGCGCC-CCGCC-CC-CC-GCCATCCCTGTC-GGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTCCA-CAGCAGCAGCATCAGCAACAGC-AGCAACAGAGTGTC-ATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATTCTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAATGAGGACTTGGGGGGAACTATTTAATGAACCAATTAGCTTCGTGTCGTTCATCTCGTCAACTTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCTATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAGAACTATTTAATGAATCATTAGCTTCGTGTTGTTAAAAAAAAA]

[+] EMBL BI813338             [GCTCATCGAATCCAAGGCGCC CCGCC CC CC GCCATCCCTGTC GGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTCCA CAGCAGCAGCATCAGCAACAGC AGCAACAGAGTGTC ATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATTCTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAATGAGGACTTGGGGGGAACTATTTAATGAACCAATTAGCTTCGTGTCGTTCATCTCGTCAACTTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCTATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAGAACTATTTAATGAATCATTAGCTTCGTGTTGTTAAAAAAAAA]
[-] EMBL CA882814             [GCTCATCGAATCCAAGGCGCCGCCGCCGCCGCCGGCCATCCCTGTCGGGCCGCCTGCACTGACTGAACATGGCGATGAGCTCATGCTCCAGCAGCAGCAGCATCAGCAACAGC AGCAACAGAGTGTC ATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATTCTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTT                                                                                                                                                                                                                                                                                        ]
[+] EMBL BQ907354             [                                                GCC CCTGCACTGACTGAACAT GCGATGAGCTCATGCTCCA CAGCA CAGCATCAGCAACAACAAGCAACAGAGTGTCAATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGAT GGTTGAATTCGGTATCTATTCT CAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGCTTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAATGAGGACTTGGGGGGAACTATTTAATGAACCCATTAGCTTCGTGTCGTTCATCTCGTCAACTTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCTATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAGAACTATTTAATGAATCATTAGCTTCGTG    TAAAAAAAAA]


>consensus_4419#0 GCTCATCGAATCCAAGGCGCCCCGCCCCCCGCCATCCCTGTCGGCCGCCTGCACTGACTG AACATGGCGATGAGCTCATGCTCCACAGCAGCAGCATCAGCAACAGCAGCAACAGAGTGT CATCCAAATGATTGATCCTCTTCAGATGCTCCCAGGGATGGGTTGAATTCGGTATCTATT CTGCAGTTCTGCTCACTACTTCTTGGTATTAGTTGGGTCGTTACTCCGTGAATCCAATGC TTGTTTTATGTACCTATTGTTCTGTATTGGGGGAGATTGGAAGAGGGTAGAGCTGAAAAT GAGGACTTGGGGGGAACTATTTAATGAACCAATTAGCTTCGTGTCGTTCATCTCGTCAAC TTCTTGGAAATGTTGGGTCCTTAGTCCATAAATCCGATGCTTGTTTAGTTTTATGTATCT ATTGTTCTGTATTGGGGGAGATTGGAAGAGAGTAGACCTGAAAATGAGAGGAGTTGGGAG AACTATTTAATGAATCATTAGCTTCGTGTTGTTAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)