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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4420 cluster # 4420       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4420#0 length = 609 sequences # 3  

consensusID : consensus_4420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 609
fasta sequence
                              [AAAACTTCATG-TGTATTTCTAGTTGTGGCATGATAACTAATAGACCGAGGCTAACTTACTGTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCC-ACAACCCATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCGTTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCATTAGACTTACCATAAGAGTTGGTTGAATTGTTTCAAGACGTATTGCGGTGAAGTAGGTAATCTGTTGGCTGTTTAATATGGCAAAGTTGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGATGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAGAATAAATCG]

[+] EMBL CB965708             [AAAACTTCATGTTGTATTTCTAGTTGTGGCATGATAACTAGTAGACCGAGGCTAACTTACTGTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGACCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCCAACAACCCATCATCGAGACTCAAAGAACCCTAAAGTG                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB966610             [ AAACTTCATG TGTATTTCTAGTTGTGGCATGATAACTAATAGACCGAGGCTAACTTACTGTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCC ACAACCCATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCGTTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCATTAGACTTACCATAAGAGTTGGTTGAATTGTTTCAAGACGTATTGCGGTGAAGTAGGTAATCTGTTGGCTGTTTAATATGGCAAAGTTGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGATGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAGAATAAATC ]
[+] EMBL CB966818             [  AACTTCA G TGTA TTCTAG TGTGGCATGATAACTAATAGACCGAGGCTAACTTAC G TGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCC ACAACCCATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCGTTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCATTAGACTTACCATAAGAGTTGGTTGAATAGTTTCAAGACGTATTGCGGTGAAGTAGGTAATCTGTGGGCTGTTTAATATGGCAAAGTAGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGATGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAGAATAAATCG]


>consensus_4420#0 AAAACTTCATGTGTATTTCTAGTTGTGGCATGATAACTAATAGACCGAGGCTAACTTACT GTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGG TCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGT TCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACG GACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCCACAACC CATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCG TTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCA TTAGACTTACCATAAGAGTTGGTTGAATTGTTTCAAGACGTATTGCGGTGAAGTAGGTAA TCTGTTGGCTGTTTAATATGGCAAAGTTGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGA TGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAG AATAAATCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)