cluster # 4421

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Oryza sativa
cluster # 4421 cluster # 4421 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4421#0 length = 927 sequences # 3

consensusID : consensus_4421#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 927
fasta sequence

                              [GCCCGCCTTGGCGGCGTCGTCCCCGGCACAGGCTTCGCCTTCGCCGCCCGAGTGGAGGTTCTCGCAGGTGTTCGGCGAGCGCAGCGCTGGGGAGGAGGTCCAGGATGTGGACATCATATCGGCAATAGAATTCAATAAATCAGGACAGCATCTTGCCACTGGGGACAGAGGGGGGCGAGTTGTTTTGTTTGAAAGGACAGATGCCAAGGATAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAGTTTGATTATCTGAAGAGCTTGGAAATTGAAGAGAAGATTAACAAGATAAAGTGGTGCCAAACAGCAAATGGAGCATTGTTTCTTCTGTCCACAAATGATAAGACAATAAAGTTTTGGAAGGTTCAAGAAAAGAAGGTCAAAAAGGTATCTGAGATGAATTTGAGCCCTTCAAATGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCCAAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTG-TGGTGGTTACAAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTACCATATAAACTCTATTTCAAATAACAGTGATGGTGAGACTTTCATATCAGCAGATGATTTGCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTTAACATTA-TTGATGTTAAACCTACAAACATGGAGGACCTGACTGAGGTGATAACAATCTTGCTGAGTCCACCCTACTCACTTGTAATACATTTGGGTTAGTAGTAGCNAAATGGGGTCCATTCGNCCTTGTTGCCTGNAGGNAAGCAACCCCTTTTGTNGCACTC]

[+] EMBL CB633553             [GCCCGCCTTGGCGGCGTCGTCCCCGGCACAGGCTTCGCCTTCGCCGCCCGAGTGGAGGTTCTCGCAGGTGTTCGGCGAGCGCAGCGCTGGGGAGGAGGTCCAGGATGTGGACATCATATCGGCAATAGAATTCAATAAATCAGGACAGCATCTTGCCACTGGGGACAGAGGGGGGCGAGTTGTTTTGTTTGAAAGGACAGATGCCAAGGATAATGCCTGTAGAAAAGAGGCTGAGAAAGTTGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAGTTTGATTATCTGAAGAGCTTGGAAATTGAAGAGAAGATTAACAAGATAAAGTGGTGCCAAACAGCAAATGGAGCATTGTTTCTTCTGTCCACAAATGATAAGACAATAAAGTTTTGGAAGGTTCAAGAAAAGAAGGTCAAAAAGGTATCTGAGATGAATTTGAGCCCTTCAAATGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCCAAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTG TGGTGGTTACAAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTACCATATAAACTCT TTTCAAATAACAGTGATGGTGAGACTTTCATATCAGCAGATGATTTGCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTTAACATTA TTGATGTTAAACCTACAAACATGGAGGACCTGACTGAGGTGAT                                                                                                                  ]
[+] EMBL CF324050             [                                                                                                                                                                                                                                                     ATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGAACCAGAGTTTGATTATCTGAAGAGCTTGGAAATTGAAGAGAAGATTAACAAGATAAAGTGGTGCCAAACAGCAAATGGAGCATTGTTTCTTCTGTCCACAAATGATAAGACAATAAAGTTTTGGAAGGTTCAAGAAAAGAAGGTCAAAAAGGTATCTGAGATGAATTTGAGCCCTTCAAATGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCCAAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTGNTGGTGGTTACAAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTACCATATAAACTCTATTTCAAATAACAGTGATGGTGAGACTTTCATATCAGCAGATGATTTGCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTT ACATTATTTGATGTTAAACCTAC AACATGGAG                                                                                                                                   ]
[+] EMBL AF092948             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCCCTTCAAATGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCCAAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTG TGGTGGTTACAAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTACCATATAAACTCTATTTCAAATAACAGTGATGGTGAGACTTTCATATCAGCAGATGATTTGCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTTAACATTA TTGATGTTAAACCTACAAACATGGAGGACCTGACTGAGGTGATAACAATCTTGCTGAGTCCACCCTACTCACTTGTAATACATTTGGGTTAGTAGTAGCNAAATGGGGTCCATTCGNCCTTGTTGCCTGNAGGNAAGCAACCCCTTTTGTNGCACTC]




>consensus_4421#0
GCCCGCCTTGGCGGCGTCGTCCCCGGCACAGGCTTCGCCTTCGCCGCCCGAGTGGAGGTT
CTCGCAGGTGTTCGGCGAGCGCAGCGCTGGGGAGGAGGTCCAGGATGTGGACATCATATC
GGCAATAGAATTCAATAAATCAGGACAGCATCTTGCCACTGGGGACAGAGGGGGGCGAGT
TGTTTTGTTTGAAAGGACAGATGCCAAGGATAATGCCTGTAGAAAAGAGGCTGAGAAAGT
TGATTATTCCGTTAGCAGGCATCCTGAATTTCGCTACAAAACTGAGTTTCAAAGCCATGA
ACCAGAGTTTGATTATCTGAAGAGCTTGGAAATTGAAGAGAAGATTAACAAGATAAAGTG
GTGCCAAACAGCAAATGGAGCATTGTTTCTTCTGTCCACAAATGATAAGACAATAAAGTT
TTGGAAGGTTCAAGAAAAGAAGGTCAAAAAGGTATCTGAGATGAATTTGAGCCCTTCAAA
TGCATCTGCAAATGGTAGACCTGCTGGCAGTAATGCTAGTGGTTCGAGCGCATATCTCCC
AAATGGTGGCATTTCAAAACCTGTTGGACTCAATTCGCTTCGCCTGCCTGTGGTGGTTAC
AAGCCAAGAAACAAGTCTTTCTGCAAGTTGCCGAAGAGTCTTTACGCATGCACATGACTA
CCATATAAACTCTATTTCAAATAACAGTGATGGTGAGACTTTCATATCAGCAGATGATTT
GCGGATAAATCTTTGGAATTTGGAAATTAGCAACCAAAGTTTTAACATTATTGATGTTAA
ACCTACAAACATGGAGGACCTGACTGAGGTGATAACAATCTTGCTGAGTCCACCCTACTC
ACTTGTAATACATTTGGGTTAGTAGTAGCNAAATGGGGTCCATTCGNCCTTGTTGCCTGN
AGGNAAGCAACCCCTTTTGTNGCACTC

clustalw multiple alignements is not computed in this case