cluster # 4425

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Oryza sativa
cluster # 4425 cluster # 4425 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4425#0 length = 1217 sequences # 3
consensusID : consensus_4425#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1217
fasta sequence
                              [CCTTCCTCCCCTACCTCCCCTTTGCGCTTGACATCGCCGGGTGGATCAGCGGCGGAGGCTGCCAGCGATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGTTGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGGAATGCCCCTTCGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGACTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGTTGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCGAGAAGCTCTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGAGTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGATCTGCTGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTCTCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACACTGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCATGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGATATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGCAGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTACAAGCTAGTGACGCACTGACGCCTGCTGTTGTGGCGAACCAAGGCAAGTTGCGTGGTTTGAGATTGTGGCAACTCGGGTTTATTACTGACTATACACATGCTTAATTTGAATGACAAAGTGTGGCTTAAACAAACGAGAAAGTGTATTACTGTATACCACTCTCTTGGCATTTCAACTGAGTTAGTGTGGCTTTTTGC]

[+] EMBL AK073996             [CCTTCCTCCCCTACCTCCCCTTTGCGCTTGACATCGCCGGGTGGATCAGCGGCGGAGGCTGCCAGCGATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGTTGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGGAATGCCCCTTCGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGACTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGTTGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCGAGAAGCTCTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGAGTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGATCTGCTGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTCTCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACACTGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCATGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGATATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGCAGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTACAAGCTAGTGACGCACTGACGCCTGCTGTTGTGGCGAACCAAGGCAAGTTGCGTGGTTTGAGATTGTGGCAACTCGGGTTTATTACTGACTATACACATGCTTAATTTGAATGACAAAGTGTGGCTTAAACAAACGAGAAAGTGTATTACTGTATACCACTCTCTTGGCATTTCAACTGAGTTAGTGTGGCTTTTTGC]
[+] EMBL AK061158             [   TCCTCCCCTACCTCCCCTTTGCGCTTGACATCGCCGGGTGGATCAGCGGCGGAGGCTGCCAGCGATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGTTGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGGAATGCCCCTTCGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGACTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGTTGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCGAGAAGCTCTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGAGTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGATCTGCTGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTCTCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACACTGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCATGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGATATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGCAGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTACAAGCTAGTGACGCACTGACGCCTGCTGTTGTGGCGAACCAAGGCAAGTTGCGTGGTTTGAGATTGTGGCAACTCGGGTTTATTACTGACTATACACATGCTTAATTTGAATGACAAAGTGTGGCTT                                                                       ]
[+] EMBL CA753492             [                                           GATCAGCGGCGGAGGCTGCCAGCGATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTCGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATCGGCTGCATATGAGATTGTTGAGCTTTTCTGCGACTCCGTGCTGGCAAGGGTCCCTATTGTTGAGGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_4425#0
CCTTCCTCCCCTACCTCCCCTTTGCGCTTGACATCGCCGGGTGGATCAGCGGCGGAGGCT
GCCAGCGATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAA
AACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCA
GCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGC
AAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGT
TGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGGAATG
CCCCTTCGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGA
CTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGT
TGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCGAGAAGCT
CTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGA
GTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGA
TCTGCTGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTC
TCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACAC
TGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCA
TGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGAT
ATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGC
AGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTAC
AAGCTAGTGACGCACTGACGCCTGCTGTTGTGGCGAACCAAGGCAAGTTGCGTGGTTTGA
GATTGTGGCAACTCGGGTTTATTACTGACTATACACATGCTTAATTTGAATGACAAAGTG
TGGCTTAAACAAACGAGAAAGTGTATTACTGTATACCACTCTCTTGGCATTTCAACTGAG
TTAGTGTGGCTTTTTGC
clustalw multiple alignements is not computed in this case