cluster # 4430

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Oryza sativa
cluster # 4430 cluster # 4430 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4430#0 length = 850 sequences # 3

consensusID : consensus_4430#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 850
fasta sequence

                              [AGCACAAGCAGAGAGGGAGAGGGAGAGAGAGGGAAGAAGAAGGTGAGGGAGCTGGGCAATGGCGACTTCCTTTCAGGGGACGACGACCAAGTGCATGGCGTGCGACAAGACGGTGTACCTGGTCGACAAGCTCACCGCCGACAACAGGGTCTACCACAAGGCCTGCTTCCGGTGCCACCATTGCAAGGGCACCCTCAA-CTCGCGAACTACAACTCGTTTGAAGGAGTGCTCTACTGCAGGCCTCACTTTGATCAGCTGTTCAAGAGGACTGGAAGTTTAGACAAGAGCTTTGAAGGAACTCCAAAGGTTGTCAAGCCAGAAAAAACAGTTGAGAATGAGAATGCTATTAAAGTCTCGAGCGCATTTGCTGGCACGAGAGAGAAATGCGTGGGATGCAACAAGACAGTCTATCCAATTGAAAGGGTTACTGTCAATAACACCATGTATCACAAAAGCTGCTTCAAGTGCTGTCATGGAGGATGCACCATTAGCCCCTCAAATTACATCGCACACGAAGGGAAGCTCTATTGCAAGCACCACCATATTCAGTTGATCAAAGAGAAGGGGAACTTCAGCCAACTTGAGAATGACCATGAGAAGGCATCACAATCTGGATCTGTAGAGGATGAAGATTCAGAATATTAGTCCTTTGAGAAATTTCCAGAGATAAATAATGATCTTCTTGCTTTTGCTCCAGAGCACCATGTCTTTCTTTGCGCGGTCTTTACAGTTTTTTCCCAATGAAGGTCATGTGCATTCAGAGAACAATAATATTATTTGGCTTGTATCCGCTTGTAAAACCTTGTTATATTGGAGTCAGAATGTCTACCTGGTTTGAACCTTTAAAAAA]

[+] EMBL AU102059             [AGCACAAGCAGAGAGGGAGAGGGAGAGAGAGGGAAGAAGAAGGTGAGGGAGCTGGGCAATGGCGACTTCCTTTCAGGGGACGACGACCAAGTGCATGGCGTGCGACAAGACGGTGTACCTGGTCGACAAGCTCACCGCCGACAACAGGGTCTACCACAAGGCCTGCTTCCGGTGCCACCATTGCAAGGGCACCCTCAAGCTCGCGAACTACAACTCGTTTGAAGGAGTGCTCTACTGCAGGCCTCACTTTGATCAGCTGTTCAAGAGGACTGGAAGTTTAGACAAGAGCTTTGAAGGAACTCCAAAGGTTGTCAAGCCAGAAAAAACAGTTGAGAATGAGAATGCTATTAAAGTCTCGAGCGCATTTGCTGGCACGAGAGAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU102060             [                                                                                                                                                                                      cCAAGGNACCCCTCAA CTCGCGAACTACAACNCGTTTGAAGGAGTGCTCTACTGCAGGCCTCACTTTGATCAGCTGTTCAAGAGGACTGGAAGTTTAGACAAGAGCTTTGAAGGAACTCCAAAGGTTGTCAAGCCAGAAAAAACAGTTGAGAATGAGAATGCTATTAAAGTCTCGAGCGCATTTGCTGGCACGAGAGAGAAATGCGTGGGATGCAACAAGACAGTCTATCCAATTGAAAGGGTTACTGTCAATAACACCATGTATCACAAAAGCTGCTTCAAGTGCTGTCATGGAGGATGCACCATTAGCCCCTCAAATTACATCGCACACGAAGGGAAGCTCTATTGCAAGCACCACCATATTCAGTTGATCAAAGAGAAGGGGAACTTCAGCCAACTTGAGAATGACCATGAGAAGGCATCACAATCTGGATCTGTAGAGGATGAAGATTCAGAATATTAGTCCTTTGAGAAATTTCCAGAGATAAATAATGATCTTCTTGCTTTTGCTCCAGAGCACCATGTCTTTCTTTGCGCGGTCTTTACAGTTTTTTCCCAATGAAGGTCATGTGCATTCAGAGAACAATAATATTATTTGGCTTGTATCCGCTTGTAAAACCTTGTTATATTGGAGTCAGAATGTCTACCTGGTTTGAACCTTTAAAAAA]
[+] EMBL AK058220             [                                                                                                                                                                                                                                                                                                                                                             AAAGTCTCGAGCGCATTTGCTGGCACGAGAGAGAAATGCGTGGGATGCAACAAGACAGTCTATCCAATTGAAAGGGTTACTGTCAATAACACCATGTATCACAAAAGCTGCTTCAAGTGCTGTCATGGAGGATGCACCATTAGCCCCTCAAATTACATCGCACACGAAGGGAAGCTCTATTGCAAGCACCACCATATTCAGTTGATCAAAGAGAAGGGGAACTTCAGCCAACTTGAGAATGACCATGAGAAGGCATCACAATCTGGATCTGTAGAGGATGAAGATTCAGAATATTAGTCCTTTGAGAAATTTCCAGAGATAAATAATGATCTTCTTGCTTTTGCTCCAGAGCACCATGTCTTTCTTTGCGCGGTCTTTACAGTTTTTTCCCAATGAAGGTCATGTGCATTCAGAGAACAATAATATTATTTGGCTTGTATCCGCTTGTAAAACCTTGTTATATTGGAGT                                 ]




>consensus_4430#0
AGCACAAGCAGAGAGGGAGAGGGAGAGAGAGGGAAGAAGAAGGTGAGGGAGCTGGGCAAT
GGCGACTTCCTTTCAGGGGACGACGACCAAGTGCATGGCGTGCGACAAGACGGTGTACCT
GGTCGACAAGCTCACCGCCGACAACAGGGTCTACCACAAGGCCTGCTTCCGGTGCCACCA
TTGCAAGGGCACCCTCAACTCGCGAACTACAACTCGTTTGAAGGAGTGCTCTACTGCAGG
CCTCACTTTGATCAGCTGTTCAAGAGGACTGGAAGTTTAGACAAGAGCTTTGAAGGAACT
CCAAAGGTTGTCAAGCCAGAAAAAACAGTTGAGAATGAGAATGCTATTAAAGTCTCGAGC
GCATTTGCTGGCACGAGAGAGAAATGCGTGGGATGCAACAAGACAGTCTATCCAATTGAA
AGGGTTACTGTCAATAACACCATGTATCACAAAAGCTGCTTCAAGTGCTGTCATGGAGGA
TGCACCATTAGCCCCTCAAATTACATCGCACACGAAGGGAAGCTCTATTGCAAGCACCAC
CATATTCAGTTGATCAAAGAGAAGGGGAACTTCAGCCAACTTGAGAATGACCATGAGAAG
GCATCACAATCTGGATCTGTAGAGGATGAAGATTCAGAATATTAGTCCTTTGAGAAATTT
CCAGAGATAAATAATGATCTTCTTGCTTTTGCTCCAGAGCACCATGTCTTTCTTTGCGCG
GTCTTTACAGTTTTTTCCCAATGAAGGTCATGTGCATTCAGAGAACAATAATATTATTTG
GCTTGTATCCGCTTGTAAAACCTTGTTATATTGGAGTCAGAATGTCTACCTGGTTTGAAC
CTTTAAAAAA

clustalw multiple alignements is not computed in this case