cluster # 4434

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Oryza sativa
cluster # 4434 cluster # 4434 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4434#0 length = 442 sequences # 3

consensusID : consensus_4434#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 442
fasta sequence

                              [CCGCGTCCCCTTCCAAGGAGGGAGTTAGGGTTTAACTCCGACTGAACGATCCCCCCCGCCGGCCACCGCCCTCGCCGGCGTCGATCCGATACGGCGTGCGCCTGGTCGCTGCACCATGGGGTACCTGCAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGCTTTGCGGAGCAAAATGAAGCAGAAGGCCCTTAAGGAGTGTGATTTCTACTGCTCAAAATATGCTGAGTGTGCTCGAGGTAGAACTTTTTCGGTGGTATGGCAATGCCGCAAACAAGCAAAAGAGTTGAATGATTGCCTTCATCAATTCACAAATGATGCAGTCCTGGAAGAAATGAAGAAGGCTTACATGGTT-GAGCAAGAGAGCAAGGAAAAGAACCCATGACCCTTATGCAATGGCCCATGGGCCCATGGGTTTCCTCCATGCCTTGTT]

[+] EMBL AK103486             [CCGCGTCCCCTTCCAAGGAGGGAGTTAGGGTTTAACTCCGACTGAACGATCCCCCCCGCCGGCCACCGCCCTCGCCGGCGTCGATCCGATACGGCGTGCGCCTGGTCGCTGCACCATGGGGTACCTGCAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGCTTTGCGGAGCAAAATGAAGCAGAAGGCCCTTAAGGAGTGTGATTTCTACTGCTCAAAATATGCTGAGTGTGCTCGAGGTAGAACTTTTTCGGTGGTATGGCAATGCCGCAAACAAGCAAAAGAGTTGAATGATTGCCTTCATCAATTCACAAATGATGCAGTCCTGGAAGAAATGAAGAAGGCTTACATGGTT GAGCAAGAGAGCAAGGAAAAGAACC                                                     ]
[+] EMBL CA753449             [                   GGGAGTNAGGGTTTAACTCCGACTGAACGATCCCCCCCGCCGGCCACCGCCCTCGCCGGCGTCGATCCGATACGGCGTGCGCCTGGTCGCTGCACCATGGGGTACCTGCAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGCTTTGCGGAGCAAAATGAAGCAGAAGGCCCTTAAGGAGTGTGATTTCTACTGCTCAAAATATGCTGAGTGTGCTCGAGGTAGAACTTTTCCGGTGGTATGGCAATGCCGCCAACCAGCCAAAGAGTTGAATGATTGCCTTCATCCATTCCCAAATGATGCAGTCCTGGAAGAAATGAAGAAGGCCTACCTGGTTGGACCAAGAAAACCAGGAAAAGAACCCATGACCCTTATGCAATGGCCCATGGGCCCATGGGTTTCCTCCATGCCTTGTT]
[+] EMBL AK063892             [                                TAACTCCGACTGAACGATCCCCCCCGCCGGCCACCGCCCTCGCCGGCGTCGATCCGATACGGCGTGCGCCTGGTCGCTGCACCATGGGGTACCTGCAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGCTTTGCGGAGCAAAATGAAGCAGAAGGCCCTTAAGGAGTGTGATTTCTACTGCTCAAAATATGCTGAGTGTGCTCGAGGTAGAACTTTTTCGGTGGTATGGCAATGCCGCAAACAAGCAAAAGAGTTGAATGATTGCCTTCATCAATTCACAAATGATGCAGTCCTGGAAGAAATGAAGAAGGCTTACATGGTT GAGCAAGAGAGCAAGGAAAAGAACC                                                     ]




>consensus_4434#0
CCGCGTCCCCTTCCAAGGAGGGAGTTAGGGTTTAACTCCGACTGAACGATCCCCCCCGCC
GGCCACCGCCCTCGCCGGCGTCGATCCGATACGGCGTGCGCCTGGTCGCTGCACCATGGG
GTACCTGCAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGCTTTGCGGAG
CAAAATGAAGCAGAAGGCCCTTAAGGAGTGTGATTTCTACTGCTCAAAATATGCTGAGTG
TGCTCGAGGTAGAACTTTTTCGGTGGTATGGCAATGCCGCAAACAAGCAAAAGAGTTGAA
TGATTGCCTTCATCAATTCACAAATGATGCAGTCCTGGAAGAAATGAAGAAGGCTTACAT
GGTTGAGCAAGAGAGCAAGGAAAAGAACCCATGACCCTTATGCAATGGCCCATGGGCCCA
TGGGTTTCCTCCATGCCTTGTT

clustalw multiple alignements is not computed in this case