Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4437 cluster # 4437       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4437#0 length = 323 sequences # 3  
consensusID : consensus_4437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 323
fasta sequence 
                              [AGAACCACCTCGCTGCTTCGCGCTAG-TA-AGTCGCTGGTTAGAAAGAGACGCGGCAATGGCGCTCCTACGGCCTCTCGCGCTCTGCTTGCTGCTCGTCTCCTGCGCCGCGCAGTCGCCGGCCTCGTCGCCGTCGG-GT-CGAACGGTCCTCCGCTCAGCGCCGCCACGCCGCA-GAATNCCGCCGCCTCGTCGCCACAGGTCTCGGCCGC-TGCACCGACCACGGCAGCCTCGGCGCCACAGGTGTCGTCCGCGGCGGCCCCGACCAATTGCCG-CTCGGCGNCGCAAGTCTTCCGCCGCGGCCCCGACCAATNGCCGCCAAGGGGCCG]

[+] EMBL AU064341             [AGAACCACCTCGCTGCTTCGCGCTAG TA AGTCGCTGGTTAGAAAGAGACGCGGCAATGGCGCTCCTACGGCCTCTCGCGCTCTGCTTGCTGCTCGTCTCCTGCGCCGCGCAGTCGCCGGCCTCGTCGCCGTCGG GT CGAACGGTCCTCCGCTCAGCGCCGCCACGCCGCA GAATNCCGCCGCCTCGTCGCCACAGGTCTCGGCCGCTTGCACCGACCACGGCAGCCTCGGCGCCACAGGTGTCGTCCGCGGCGGCCCCGACCAATTGCCG CTCGGCGNCGCAAGTCTTCCGCCGCGGCCCCGACCAATNGCCGCCAAGGGGCCG]
[+] EMBL AU064353             [AGAACCACCTCGCTGCTTCGCGCTAN TANAGTCGCTGGTTAGAAAGAGACGCGGCAATGGCGCTCCTACGGCCTCTCGCGCTCTGCTTGCTGCTCGTCTCCTGCGCCGCGCAGTCGCCGGCCTCGTCGCCGTCGG GTNCGAACGGTCCTCCGCTCAGCGCCGCCACGCCGCA G ATNCCGCCGCCTCGTCGNCACAGGTCTCGGCCGC TGCACCGACCACGGCAGCCTCGGCGCCACANGTGTCGTCCGCGGCGGCCCCGACCAA TGCCGNCTCGGCGCCAGNAGTCTcc                                   ]
[+] EMBL AU183219             [ GAACCACCTCGCTGCTTCGCGCTAGCTA AGTCGCTGGTTAGAAAGAGACGCGGCAATGGCGCTCCTACGGCCTCTCGCGCTCTGCTTGCTGCTCGTCTCCTGCGCCGCGCAGTCGCCGGCCTCGTCGCCGTCGGCGT CGAACGGTCCTCCGCTCAGCGCCGCCACGCCGCAGGCAT CCGCCGCCTCGTCGCCACAGGTCTCGGCCGC TGCACCGACCACGGCAG                                                                                                     ]




>consensus_4437#0
AGAACCACCTCGCTGCTTCGCGCTAGTAAGTCGCTGGTTAGAAAGAGACGCGGCAATGGC
GCTCCTACGGCCTCTCGCGCTCTGCTTGCTGCTCGTCTCCTGCGCCGCGCAGTCGCCGGC
CTCGTCGCCGTCGGGTCGAACGGTCCTCCGCTCAGCGCCGCCACGCCGCAGAATNCCGCC
GCCTCGTCGCCACAGGTCTCGGCCGCTGCACCGACCACGGCAGCCTCGGCGCCACAGGTG
TCGTCCGCGGCGGCCCCGACCAATTGCCGCTCGGCGNCGCAAGTCTTCCGCCGCGGCCCC
GACCAATNGCCGCCAAGGGGCCG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)