These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4438#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 641 fasta sequence [GAGCCCGTCTTCTTGGTGCGAGATCCAGGTTCCCGAGCAGGCCATGGGTGGTGTCTACAGTGTCCTTACCCGCCGCCGTGGTATGGTCTTCAACGAGGAGCAGCGTCCCGGTACTCCTCTGTTCACCATCAAGGCCTACCTTCCCGTCATGGAGTCTTTCGGTTTCAACGCCGATCTGCGCCAGGGTACCTCTGGCCAGGCCTTCCCCCAGTCCGTCTTCGACCACTGGCAGGTTCTGCAGGGTGGTTCTCCCCTCGACGCCACCTCCAAGACCGGTACCGTCGTCCAGAACACCAGGAAGC-GCAAGGGTCTCAAGCCCGAGGTTCCCGGTGTCGAGAACTACTACGACAAGTTGTAAACGGCTTTTGGCCAAGTTGGTATACCCGATCCTTGATCCTTTCTCTAGCATCACTCAGCAGGGCAGGCTCCACTGGCAATGAGCGCCAGTCAGGTTCCCATTTTCTCGGCGGTCGGTGGTACAAAAAAGCGGAATGGACGTATCTTTGGAGGGCTGTTTGAACAGCATATGAGGATGGCGGTGGAAGATGAGCACGTCGCTACTGGCGTCCTTAGATACGATCTGCTTGTCTTGTAGAACTTTATTTGCATTATGAACGCGTTGATGACA-CTA---AAAAAAAAAA] [+] EMBL BQ907452 [GAGCCCGTCTTCTTGGTGCGAGATCCAGGTTCCCGAGCAGGCCATGGGTGGTGTCTACAGTGTCCTTACCCGCCGCCGTGGTATGGTCTTCAACGAGGAGCAGCGTCCCGGTACTCCTCTGTTCACCATCAAGGCCTACCTTCCCGTCATGGAGTCTTTCGGTTTCAACGCCGATCTGCGCCAGGGTACCTCTGGCCAGGCCTTCCCCCAGTCCGTCTTCGACCACTGGCAGGTTCTGCAGGGTGGTTCTCCCCTCGACGCCACCTCCAAGACCGGTACCGTCGTCCAGAACACCAGGAAGC GCAAGGGTCTCAAGCCCGAGGTTCCCGGTGTCGAGAACTACTACGACAAGTTGTAAACGGCTTTTGGCCAAGTTGGTATACCCGATCCTTGATCCTTTCTCTAGCATCACTCAGCAGGGCAGGCTCCACTGGCAATGAGCGCCAGTCAGGTTCCCATTTTCTCGGCGGTCGGTGGTACAAAAAAGCGGAATGGACGTATCTTTGGAGGGCTGTTTGAACAGCATATGAGGATGGCGGTGGAAGATGAGCACGTCGCTACTGGCGTCCTTAGATACGATCTGCTTGTCTTGTAGAACTTTATTTGCATTATGAACGCGTTGATGACA CTA AAAAAA ] [+] EMBL BI813307 [ TGGTCTTCAACGA GA CAGCGTCCCGGTACTCCTCTGTTCACCATCAA GCCTACCTTCCCGTCATGGAGTCTTTCGGTTTCAACGCCGATCTGCG CAGGGTACCTCTGGCCA GCCTTCCCCCAGTCCGTCTTCGACCACTGGCAGGTTCTGCA GGTGGTTCTCCCCTCGACGCCACCTCCAAGACCGGTACCGTCGTCCAGAACACCAGGAAGC GCAAGGGTCTCAAGCCCGAGGTTCCCGGTGTCGAGAACTACTACGACAAGTTGTAAACGGCTTTTTGCCAAGTTGGTATACCCGATCCTTGATCCTTTCTCTAGCATCACTCAGCAGGGCAGGCTCCACTGGCAATGAGCGCCAGTCAGGTTCCCATTTTCTCGGCGGTCGGTGGTACCAAAAAGCGGAATGGACGTATCTTTGGAGGGCTGTTTGAACAGCATATGAGGATGGCGGTGGAAGATGAGCACGTCGCTACTGGCGTCCTTAGATACGATCTGCTTGTCTTGTAGAACTTTATTTGCATTATGAACGCGTTGATGACACCTAGTTAAAAAAAAAA] [+] EMBL BQ908158 [ TCTCCCCTGGACGCCACCTCCAAGACCGGTACCGTCGTCCAGAACACCAGGAAGCTGCAAGGGTCTCAAGCCCGAGGTTCCCGGTGTCGAGAACTACTACGACAAGTTGTAAACGGCTTTT GCCAAGTTGGTATACCCGATCCTTGATCCTTTCTCTAGCATCACTCAGCAGGGCAGGCTCCACTGGCAATGAGCGCCAGTCAGGTTCCCATTTTCTCGGCGGTCGGTGGTAC AAAAAGCGGAATGGACGTATCTTTGGA GGCTGTTTGAACAGCATATGAGGATGGCGGTGGAAGATGAGCACGTCGCTACTGGCGTCCTTAGATACGATCTGCTTGTCTTGTAGAACTTTATTTGCATTATGAACGCGTTGATGACA CTA AAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||