cluster # 4445

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Oryza sativa
cluster # 4445 cluster # 4445 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4445#0 length = 803 sequences # 3

consensusID : consensus_4445#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 803
fasta sequence

                              [TTTTTTTTTTTTTCAAGAAAAACAAGGCAAGTTTGAATTTCTGCCCAAAAAATATTTACAGTAGTAATGCAATTGATGTTACACTGTTTTTACATCTATCTAACTCATCTACTACACTTTTGTAATGATGCTCTACACAGGTCAAACTGATGGCATGAAAATCTATGGCTTAGCTCTGTACAAACTACAAAGGCTAGCAAATTATGTGAAT-TGCCGATAGCAATATGCAAGACGTTCACATCATG-AAACAGCCGCCACCTGCTGCCGCAGCGGCGTGAGAAGCCTTGCAAGAGG-CAGAGGCACATGCGCTTTT-ACAAAGGTACCATTTTCCGTGTACTCCGT-TTTC-TCAACCAT-CCCAACCTT-GTGTATGTCACTCAGGAGCTCTCCTT-TGT-CATATGGAA-CAA-AAGCTTCTATCGGCACCAA-TGAGTCTTT-CAACTTTGCTTGAATTGCATTGCAAAACTCCTCCAAACCATCACCATTGATGGCTGATATGCAAATTATCCCTTGTTTATCAGCTTCCTCTTTCACTCTCAGGGTGTCATCAGTATTGCCAATCTTATTCCATACAACCAACTTGGGAATTGACTCTATATCCAACTCCTTCAACACTTTGTCAACAGCATCTATCTGCTGTTGAGCTAACGGATGGCTGATATCTACAAGATGAAACTAT-ACTGATGATTCTGATATCTCCTCCAATGTTGCTCTAAATGCTGCTACCAACATAGTAGGTAATTTTTGAATGAATCCAACAGTATCTGTTAGGAGGAATTCAGTACCATTCTTCATCAAAACCCTCCTTG]

[+] EMBL CA762456             [TTTTTTTTTTTTTCAAGAAAAACAAGGCAAGTTTGAATTTCTGCCCAAAAAATATTTACAGTAGTAATGCAATTGATGTTACACTGTTTTTACATCTATCTAACTCATCTACTACACTTTTGTAATGATGCTCTACACAGGTCAAACTGATGGCATGAAAATCTATGGCTTAGCTCTGTACAAACTACAAAGGCTAGCAAACTATGTGAAT TGCCGATAGCAATATGCAAGACGTTCACATCATG AAACAGCCGCCACCTGCTGCCGCAGCGGCGTGAGAAGCCTTGCAAGAGG TAAAGGCACATGCGCTTTT ACAAAGGTACCATTTTCCGTGTACTCCGT TTTC TCAACCAT CCCAACCTT GTGTATGTCACTCAGGAGCTCTCCTT TGT CATATGGAA CAA AAGCTTCTATCGGCACCAA TGAGTCTTT CAACTTTGCTTGAATTGCATTGCAAAACTCCTCCAAACCATCACCATTGATGGCTGATATGCAAATTATCCCTTGTTTATCAGCTTCCTCTTTCACTCTCAGGGTGTCATCAGTATTGCCAATCTTATTCCATACAACCAACTTGGGAATTGACTCTATATCCAACTCCTTCAACACTTTGTCAACAGCATCTATCTGCTGTTGAGCTAACGGATGGCTGATATCTACAAGATGAAACTAT ACTGATGATTCTGATATCT                                                                                                               ]
[+] EMBL CB644866             [                           CAAGTGTCAATTTCTGCCCCAAAAATATTTACAGTAGTAATGCAATTGATGTTACACTGTTTTTACATCTATCTAACTCATCTACTACATTTTTGTAATGATGCTCTACACAGGTCAAACTGATGGCATGAAAATCTATGGCTTACCTCTGTACAAACTACAAAGGCTAGCAAATTATGTGAAT TGCCGATAGCAATATGCAAGACGTTCACATCATG AAACAGCCGCCACCTGCTGCCGCAGCGGCGTGAGAAGCCTTGCAAGAGG CAGAGGCACATGCGCTTTT ACAAAGGTACCATTTTCCGTGTACTCCGT TTTC TCAACCAT CCCAACCTT GTGTATGTCACTCAGGAGCTCTCCTT TGT CATATGGAA CAA AAGCTTCTATCGGCACCAA TGAGTCTTT CAACTTTGCTTGAATTGCATTGCAGAACTCCTCCAAACCATCACCATTGATGGCTGATATGCAGATTATCCCTTGTTTCTCAGCTTCCTCTTTCACTCTCAGTGTGTCATCAGTATTGTCAATCTTATTCCATACAACCAACTTGGGAATTGACTCTATATCCAACTCCTTCAACACTTTGTCAACAGCATCTATCTGCTGTTGAGCTAACGGATGGCTGATATCTACAAGATG AACTATAACTGATGATTCTGATATCTCCTCCAATGTTGCTCTAAATGCTGCTACCAACATAGTAGGTAATTTTTGAATGAATCCAACAGTATCTGTTAGGAGGAATTCAGTACCATTCTTCATCAAAACCCTCCTTG]
[-] EMBL BI810861             [                                       TCTGCCCAAAAAATATTTACAGTAGTAATGCAA TGATGTTACACTGTTTTTACATCTATCTAACTCATCTACTACA TTTTGTAATGATGCTCTACACAGGTCAAACTGATGGCATGAAAATCTATGG TTAGCTCTGTACAAACTACAAAGGCTAGCAAATTATGTGAATGTGCCGATAGCAATATGCAAGACGTTCACATCATGCAAACAGCCG CA CTG TGCCG AGAGGCGTGAGAAGCCTTGCAAGAGGCCAGAGGCACATGCGCTTTTCACAAAGGTACCATTTTCCGTGTACTCCGTATTTCATCAACCATCCCCAACCTTGGTGTATGTCACTCA GAGCTCTCCTTGTGTCCATATGGAACCAACAAGCTTCTATCGGCACCAAGTGAGTCTTTACAACTTT                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_4445#0
TTTTTTTTTTTTTCAAGAAAAACAAGGCAAGTTTGAATTTCTGCCCAAAAAATATTTACA
GTAGTAATGCAATTGATGTTACACTGTTTTTACATCTATCTAACTCATCTACTACACTTT
TGTAATGATGCTCTACACAGGTCAAACTGATGGCATGAAAATCTATGGCTTAGCTCTGTA
CAAACTACAAAGGCTAGCAAATTATGTGAATTGCCGATAGCAATATGCAAGACGTTCACA
TCATGAAACAGCCGCCACCTGCTGCCGCAGCGGCGTGAGAAGCCTTGCAAGAGGCAGAGG
CACATGCGCTTTTACAAAGGTACCATTTTCCGTGTACTCCGTTTTCTCAACCATCCCAAC
CTTGTGTATGTCACTCAGGAGCTCTCCTTTGTCATATGGAACAAAAGCTTCTATCGGCAC
CAATGAGTCTTTCAACTTTGCTTGAATTGCATTGCAAAACTCCTCCAAACCATCACCATT
GATGGCTGATATGCAAATTATCCCTTGTTTATCAGCTTCCTCTTTCACTCTCAGGGTGTC
ATCAGTATTGCCAATCTTATTCCATACAACCAACTTGGGAATTGACTCTATATCCAACTC
CTTCAACACTTTGTCAACAGCATCTATCTGCTGTTGAGCTAACGGATGGCTGATATCTAC
AAGATGAAACTATACTGATGATTCTGATATCTCCTCCAATGTTGCTCTAAATGCTGCTAC
CAACATAGTAGGTAATTTTTGAATGAATCCAACAGTATCTGTTAGGAGGAATTCAGTACC
ATTCTTCATCAAAACCCTCCTTG

clustalw multiple alignements is not computed in this case