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Oryza sativa
cluster # 4446 cluster # 4446       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4446#0 length = 2299 sequences # 1  
consensus_4446#1 length = 584 sequences # 1  
consensus_4446#2 length = 556 sequences # 1  

consensusID : consensus_4446#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2299
fasta sequence
                              [GATGCAAAAGCCTAACATCCTTGCCGGATGGTCCTAGAGCTTACTCCTCCTTGGAGAGTCTTGAAATCAAGTACTGCCCAGCTATGAAGTCACTTCCTGGATGCCTCAAGCAACGTCTTGATAGCGTTGAGGAGAAACTCTTGTCACATATGCGCTCCAGCGATCCACGGGAAGGTGCTAAATTGCTGGAACCAAAATCTTGGAAATATGTCATTCGTCGGAACAGAGATTTGTGATCCAACACTATTGATGAGGCCATGAAGAAGCTTTTTCTATTAAGGATAGCTCCCTAGCAGAGCTCACCCATTGTTGACTTGGGATTTGAATACATGGGCAATGCATCTTCTAGGTTCTAAGATGGAGCATTTTGTATGGTCAAGTCTATGGCTAAAGCAACTTGGAAACCTCATCTCGGTGAAATTATCTTCTTTTTTCACCATATTGTTGCAGACTTAGCAGCAGCAGTATATATTTTTACATAATGAAAATTTTATTGTTACTCAGTCAAAAATTATTCCGAAGGCACTCTCGGGCTCTGCACCATGACAGTGCACACAGCCAACCCACTCACACATTCCCACGACAGTGCAGCGGTATATATTCTCACCAATTACGCATACTTCGCACGTCCGTGTGAGCACATCTCTATGATTGTAGCTGCTGTATATCCAAATGGGACTTTGGAGTATCTTATAACAAGCTTTTAGTATTGGTTTTTAGGAAAAACTAATCAACACGGATTCTGAATTGTGATATATGCTAGTAATTCATCTGTTTAATTGGACTAGCTAGCTGACATAATACAGGGTCCAAATATTGAAATTGAGATTTCAGCAAGTAGAAATACAGCATAATTAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAATATATACTTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTCCCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGCTGTCAAAGAATCGACCAAGGCATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAGAGTTCAGAGCCACCGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGTCTTCGGAGCTGCCATCACCAGCAACCAAGGATGCAATGCACCTAACTGCAGAACCCCAGTGGAGAACGCCGGCAAACTGGGATGCGGGTCGGCGACGCCGTCCAGGCATGACCACAACATGCTCGACGGAATGCCCACACGTTTCTAGCCTGACTGCCTGCACCAGCTGCAAACCCGGATAGGATTCAGTGTAATGCATCTGCACCTACTAGCTTCCAATTCGTCAGAGCTAAGCCTGAACAAGTACTCATGAAGACCGTAAAATACTCTCCTCTTAAAGTAAAGAGTTACTACACGAATTGCAGTACTATATTTGCAACAAGTTAAAGTATGGTGCTGCTTCTTCCAACTATTGATCTGGATCGATCCACCATCTCAGCCCACATATAGGTGACACACCATGGAAGAGGACGGCGACACCGTGGCAGGGCGGTTGATGGCGGTGGCCAGTGAGTGATGGCCGATGGCAGTTGAGGTGAAGGCGCTGCTTCGGGCCTCGCTGCCGGACGTTGGGCATCACCTTAACCAGCAAGGAGGTGTTCACCTGGGCCTGGATCAACAACCAGCAGCTGCTCCACATCGGCGACATTGGCAGAACAAGAAAGTCCTACATTTGCACATCGTGCTCCATGTGATTAGTTGCAGAGGATAGGGTGGAGTCCGCTGGGGATGGAGGTTGTTTGCTATTTTTCTTTTACTCGTCGTCTCTATGACATGAACAAGAATGTTTTTGTATTTTTTTCGTGCTTGCTAGATGATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTATACCACACCGCTACACCCTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGTTGCCCTCTCCATTACCTATCACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACCAGGATCCTAGTTTCACAATGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGATTCACCTGTGAGTAATTTTTATCACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCGTACGACTATTTTGTGGTACAGATTAACAATACTCTTAGTATCAGTTTTTACTCTTATACTGTGTATTGAACACATTAGTAAACATATTACTACACGATTGCTACGAGATCATGGGCTATATCGAGAGGAAGGTGGCAAT]

[+] EMBL AK100554             [GATGCAAAAGCCTAACATCCTTGCCGGATGGTCCTAGAGCTTACTCCTCCTTGGAGAGTCTTGAAATCAAGTACTGCCCAGCTATGAAGTCACTTCCTGGATGCCTCAAGCAACGTCTTGATAGCGTTGAGGAGAAACTCTTGTCACATATGCGCTCCAGCGATCCACGGGAAGGTGCTAAATTGCTGGAACCAAAATCTTGGAAATATGTCATTCGTCGGAACAGAGATTTGTGATCCAACACTATTGATGAGGCCATGAAGAAGCTTTTTCTATTAAGGATAGCTCCCTAGCAGAGCTCACCCATTGTTGACTTGGGATTTGAATACATGGGCAATGCATCTTCTAGGTTCTAAGATGGAGCATTTTGTATGGTCAAGTCTATGGCTAAAGCAACTTGGAAACCTCATCTCGGTGAAATTATCTTCTTTTTTCACCATATTGTTGCAGACTTAGCAGCAGCAGTATATATTTTTACATAATGAAAATTTTATTGTTACTCAGTCAAAAATTATTCCGAAGGCACTCTCGGGCTCTGCACCATGACAGTGCACACAGCCAACCCACTCACACATTCCCACGACAGTGCAGCGGTATATATTCTCACCAATTACGCATACTTCGCACGTCCGTGTGAGCACATCTCTATGATTGTAGCTGCTGTATATCCAAATGGGACTTTGGAGTATCTTATAACAAGCTTTTAGTATTGGTTTTTAGGAAAAACTAATCAACACGGATTCTGAATTGTGATATATGCTAGTAATTCATCTGTTTAATTGGACTAGCTAGCTGACATAATACAGGGTCCAAATATTGAAATTGAGATTTCAGCAAGTAGAAATACAGCATAATTAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAATATATACTTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTCCCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGCTGTCAAAGAATCGACCAAGGCATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAGAGTTCAGAGCCACCGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGTCTTCGGAGCTGCCATCACCAGCAACCAAGGATGCAATGCACCTAACTGCAGAACCCCAGTGGAGAACGCCGGCAAACTGGGATGCGGGTCGGCGACGCCGTCCAGGCATGACCACAACATGCTCGACGGAATGCCCACACGTTTCTAGCCTGACTGCCTGCACCAGCTGCAAACCCGGATAGGATTCAGTGTAATGCATCTGCACCTACTAGCTTCCAATTCGTCAGAGCTAAGCCTGAACAAGTACTCATGAAGACCGTAAAATACTCTCCTCTTAAAGTAAAGAGTTACTACACGAATTGCAGTACTATATTTGCAACAAGTTAAAGTATGGTGCTGCTTCTTCCAACTATTGATCTGGATCGATCCACCATCTCAGCCCACATATAGGTGACACACCATGGAAGAGGACGGCGACACCGTGGCAGGGCGGTTGATGGCGGTGGCCAGTGAGTGATGGCCGATGGCAGTTGAGGTGAAGGCGCTGCTTCGGGCCTCGCTGCCGGACGTTGGGCATCACCTTAACCAGCAAGGAGGTGTTCACCTGGGCCTGGATCAACAACCAGCAGCTGCTCCACATCGGCGACATTGGCAGAACAAGAAAGTCCTACATTTGCACATCGTGCTCCATGTGATTAGTTGCAGAGGATAGGGTGGAGTCCGCTGGGGATGGAGGTTGTTTGCTATTTTTCTTTTACTCGTCGTCTCTATGACATGAACAAGAATGTTTTTGTATTTTTTTCGTGCTTGCTAGATGATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTATACCACACCGCTACACCCTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGTTGCCCTCTCCATTACCTATCACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACCAGGATCCTAGTTTCACAATGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGATTCACCTGTGAGTAATTTTTATCACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCGTACGACTATTTTGTGGTACAGATTAACAATACTCTTAGTATCAGTTTTTACTCTTATACTGTGTATTGAACACATTAGTAAACATATTACTACACGATTGCTACGAGATCATGGGCTATATCGAGAGGAAGGTGGCAAT]


>consensus_4446#0 GATGCAAAAGCCTAACATCCTTGCCGGATGGTCCTAGAGCTTACTCCTCCTTGGAGAGTC TTGAAATCAAGTACTGCCCAGCTATGAAGTCACTTCCTGGATGCCTCAAGCAACGTCTTG ATAGCGTTGAGGAGAAACTCTTGTCACATATGCGCTCCAGCGATCCACGGGAAGGTGCTA AATTGCTGGAACCAAAATCTTGGAAATATGTCATTCGTCGGAACAGAGATTTGTGATCCA ACACTATTGATGAGGCCATGAAGAAGCTTTTTCTATTAAGGATAGCTCCCTAGCAGAGCT CACCCATTGTTGACTTGGGATTTGAATACATGGGCAATGCATCTTCTAGGTTCTAAGATG GAGCATTTTGTATGGTCAAGTCTATGGCTAAAGCAACTTGGAAACCTCATCTCGGTGAAA TTATCTTCTTTTTTCACCATATTGTTGCAGACTTAGCAGCAGCAGTATATATTTTTACAT AATGAAAATTTTATTGTTACTCAGTCAAAAATTATTCCGAAGGCACTCTCGGGCTCTGCA CCATGACAGTGCACACAGCCAACCCACTCACACATTCCCACGACAGTGCAGCGGTATATA TTCTCACCAATTACGCATACTTCGCACGTCCGTGTGAGCACATCTCTATGATTGTAGCTG CTGTATATCCAAATGGGACTTTGGAGTATCTTATAACAAGCTTTTAGTATTGGTTTTTAG GAAAAACTAATCAACACGGATTCTGAATTGTGATATATGCTAGTAATTCATCTGTTTAAT TGGACTAGCTAGCTGACATAATACAGGGTCCAAATATTGAAATTGAGATTTCAGCAAGTA GAAATACAGCATAATTAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAATA TATACTTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTCCCG GAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGCTGTCAAAGAATCGACCAAGGCATGAG CCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAGAGTTCA GAGCCACCGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGTCTTCGGAGCTGCC ATCACCAGCAACCAAGGATGCAATGCACCTAACTGCAGAACCCCAGTGGAGAACGCCGGC AAACTGGGATGCGGGTCGGCGACGCCGTCCAGGCATGACCACAACATGCTCGACGGAATG CCCACACGTTTCTAGCCTGACTGCCTGCACCAGCTGCAAACCCGGATAGGATTCAGTGTA ATGCATCTGCACCTACTAGCTTCCAATTCGTCAGAGCTAAGCCTGAACAAGTACTCATGA AGACCGTAAAATACTCTCCTCTTAAAGTAAAGAGTTACTACACGAATTGCAGTACTATAT TTGCAACAAGTTAAAGTATGGTGCTGCTTCTTCCAACTATTGATCTGGATCGATCCACCA TCTCAGCCCACATATAGGTGACACACCATGGAAGAGGACGGCGACACCGTGGCAGGGCGG TTGATGGCGGTGGCCAGTGAGTGATGGCCGATGGCAGTTGAGGTGAAGGCGCTGCTTCGG GCCTCGCTGCCGGACGTTGGGCATCACCTTAACCAGCAAGGAGGTGTTCACCTGGGCCTG GATCAACAACCAGCAGCTGCTCCACATCGGCGACATTGGCAGAACAAGAAAGTCCTACAT TTGCACATCGTGCTCCATGTGATTAGTTGCAGAGGATAGGGTGGAGTCCGCTGGGGATGG AGGTTGTTTGCTATTTTTCTTTTACTCGTCGTCTCTATGACATGAACAAGAATGTTTTTG TATTTTTTTCGTGCTTGCTAGATGATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCT CTATACCACACCGCTACACCCTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGT TGCCCTCTCCATTACCTATCACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCA CCAGGATCCTAGTTTCACAATGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTG ATTCACCTGTGAGTAATTTTTATCACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCG TACGACTATTTTGTGGTACAGATTAACAATACTCTTAGTATCAGTTTTTACTCTTATACT GTGTATTGAACACATTAGTAAACATATTACTACACGATTGCTACGAGATCATGGGCTATA TCGAGAGGAAGGTGGCAAT



consensusID : consensus_4446#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 584
fasta sequence
                              [GNAAAAAACGNGNTCATTGGGATGCNAANGATAGGAGAATGATGNTTGNATTCTTTTTCGGNGGAGCCAATTTTTTGCAATCAATAAANGTATTTCCAANAAATNAATTGGATGGNGGGTGCACGGTCAANATTGCANTTGGTCAAGGGATAGTGAAGAGATAGGNGGATCCNTGGGGATGAGTGTTTGCTATTTTTCTTTAATTGTTGTTCTAAGAACATGAACAAGGATGTTTTTGTATTTTTTTCGTGCTTGTAGATGATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTATACCACACCGCTAACACCCTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGTTGCCCTCTCCATTACCTATCACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACCAGGATCCTAGTTTCACAATGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGATTCACCTGTGAGTAATTTTTATCACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCGTACGACTATTTTGTGGTACAGATTAACAATACTCTTAGTATCAGTT]

[-] EMBL BE229094             [GNAAAAAACGNGNTCATTGGGATGCNAANGATAGGAGAATGATGNTTGNATTCTTTTTCGGNGGAGCCAATTTTTTGCAATCAATAAANGTATTTCCAANAAATNAATTGGATGGNGGGTGCACGGTCAANATTGCANTTGGTCAAGGGATAGTGAAGAGATAGGNGGATCCNTGGGGATGAGTGTTTGCTATTTTTCTTTAATTGTTGTTCTAAGAACATGAACAAGGATGTTTTTGTATTTTTTTCGTGCTTGTAGATGATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTATACCACACCGCTAACACCCTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGTTGCCCTCTCCATTACCTATCACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACCAGGATCCTAGTTTCACAATGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGATTCACCTGTGAGTAATTTTTATCACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCGTACGACTATTTTGTGGTACAGATTAACAATACTCTTAGTATCAGTT]


>consensus_4446#1 GNAAAAAACGNGNTCATTGGGATGCNAANGATAGGAGAATGATGNTTGNATTCTTTTTCG GNGGAGCCAATTTTTTGCAATCAATAAANGTATTTCCAANAAATNAATTGGATGGNGGGT GCACGGTCAANATTGCANTTGGTCAAGGGATAGTGAAGAGATAGGNGGATCCNTGGGGAT GAGTGTTTGCTATTTTTCTTTAATTGTTGTTCTAAGAACATGAACAAGGATGTTTTTGTA TTTTTTTCGTGCTTGTAGATGATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTA TACCACACCGCTAACACCCTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGTTG CCCTCTCCATTACCTATCACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACC AGGATCCTAGTTTCACAATGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGAT TCACCTGTGAGTAATTTTTATCACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCGTA CGACTATTTTGTGGTACAGATTAACAATACTCTTAGTATCAGTT



consensusID : consensus_4446#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 556
fasta sequence
                              [ATTGAAATTGAGATTTCAGCAAGTAGAAATACAGCATAATTAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAATATATACTTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTCCCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGCTGTCAAAGAATCGACCAAGGCATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAGAGTTCAGAGCCACCGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGTCTTCGGAGCTGCCATCACCAGCAACCAAGGATGCAATGCACCTAACTGCAAAACCCCAGGTAAGTACCCCCCAATGACCCAGAATTCCCACCGTCTGGTTGCATCTAGAGCTAATTGATAGGGGGCACTAGCGACTGAGGAGAACTCATGTGTGGTCCCTGTGTAGTGGAGAACGCCGGCAAACTGGGATGCGGGTCGGCGACGCCGTCCAGGCATGACCACAACATGCTCGACGGAATGCCCA]

[-] EMBL AK062321             [ATTGAAATTGAGATTTCAGCAAGTAGAAATACAGCATAATTAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAATATATACTTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTCCCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGCTGTCAAAGAATCGACCAAGGCATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAGAGTTCAGAGCCACCGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGTCTTCGGAGCTGCCATCACCAGCAACCAAGGATGCAATGCACCTAACTGCAAAACCCCAGGTAAGTACCCCCCAATGACCCAGAATTCCCACCGTCTGGTTGCATCTAGAGCTAATTGATAGGGGGCACTAGCGACTGAGGAGAACTCATGTGTGGTCCCTGTGTAGTGGAGAACGCCGGCAAACTGGGATGCGGGTCGGCGACGCCGTCCAGGCATGACCACAACATGCTCGACGGAATGCCCA]


>consensus_4446#2 ATTGAAATTGAGATTTCAGCAAGTAGAAATACAGCATAATTAATACAGGTCCAACATGTT ACCACTTCTTTCCTCGAATACAATATATACTTACCTATCACTAGAGCTGATAAATCACGT TTCAAACCAAGCAAATATCCTCCCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGCT GTCAAAGAATCGACCAAGGCATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCC AAATTTCTTCGGTCCTGAGAGTTCAGAGCCACCGACGACGCATCCAACTGCAAAAACCCC AATTCCATCAGTCTTCGGAGCTGCCATCACCAGCAACCAAGGATGCAATGCACCTAACTG CAAAACCCCAGGTAAGTACCCCCCAATGACCCAGAATTCCCACCGTCTGGTTGCATCTAG AGCTAATTGATAGGGGGCACTAGCGACTGAGGAGAACTCATGTGTGGTCCCTGTGTAGTG GAGAACGCCGGCAAACTGGGATGCGGGTCGGCGACGCCGTCCAGGCATGACCACAACATG CTCGACGGAATGCCCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4446#0      GATGCAAAAGCCTAACATCCTTGCCGGATGGTCCTAGAGCTTACTCCTCCTTGGAGAGTC 60
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TTGAAATCAAGTACTGCCCAGCTATGAAGTCACTTCCTGGATGCCTCAAGCAACGTCTTG 120
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ATAGCGTTGAGGAGAAACTCTTGTCACATATGCGCTCCAGCGATCCACGGGAAGGTGCTA 180
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      AATTGCTGGAACCAAAATCTTGGAAATATGTCATTCGTCGGAACAGAGATTTGTGATCCA 240
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ACACTATTGATGAGGCCATGAAGAAGCTTTTTCTATTAAGGATAGCTCCCTAGCAGAGCT 300
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CACCCATTGTTGACTTGGGATTTGAATACATGGGCAATGCATCTTCTAGGTTCTAAGATG 360
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      GAGCATTTTGTATGGTCAAGTCTATGGCTAAAGCAACTTGGAAACCTCATCTCGGTGAAA 420
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TTATCTTCTTTTTTCACCATATTGTTGCAGACTTAGCAGCAGCAGTATATATTTTTACAT 480
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      AATGAAAATTTTATTGTTACTCAGTCAAAAATTATTCCGAAGGCACTCTCGGGCTCTGCA 540
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CCATGACAGTGCACACAGCCAACCCACTCACACATTCCCACGACAGTGCAGCGGTATATA 600
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TTCTCACCAATTACGCATACTTCGCACGTCCGTGTGAGCACATCTCTATGATTGTAGCTG 660
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CTGTATATCCAAATGGGACTTTGGAGTATCTTATAACAAGCTTTTAGTATTGGTTTTTAG 720
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      GAAAAACTAATCAACACGGATTCTGAATTGTGATATATGCTAGTAATTCATCTGTTTAAT 780
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TGGACTAGCTAGCTGACATAATACAGGGTCCAAATATTGAAATTGAGATTTCAGCAAGTA 840
consensus_4446#2      -----------------------------------ATTGAAATTGAGATTTCAGCAAGTA 25
consensus_4446#1      -----------------------------------GNAAAAAACGNGNTCATTGGGATGC 25
                                                             ***  * * *    *  *   

consensus_4446#0      GAAATACAGCATAAT--TAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAA 898
consensus_4446#2      GAAATACAGCATAAT--TAATACAGGTCCAACATGTTACCACTTCTTTCCTCGAATACAA 83
consensus_4446#1      NAANGATAGGAGAATGATGNTTGNATTCTTTTTCGGNGGAGCCAATTTTTTGCAAT-CAA 84
                       **  * ** * ***  *  *     **      *      *   ***  *  *** ***

consensus_4446#0      TATATAC-TTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTC 957
consensus_4446#2      TATATAC-TTACCTATCACTAGAGCTGATAAATCACGTTTCAAACCAAGCAAATATCCTC 142
consensus_4446#1      TAAANGTATTTCCAANAAATNAATTGGATGGNGGGTGCA-CGGTCAANATTGCANTTGGT 143
                      ** *    ** ** *  * *  *   ***       *   *   * *        *    

consensus_4446#0      CCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGC---TGTCAAAGAATCGACCAAGG 1014
consensus_4446#2      CCGGAGGCAGCCAAAAAAAAAAAAGACCAGACGAAGC---TGTCAAAGAATCGACCAAGG 199
consensus_4446#1      CAAGGGATAGTGAAGAGATAGGNGGATCCNTGGGGATGAGTGTTTGCTATTTTTCTTTA- 202
                      *  * *  **  ** * * *    ** *    *       ***     * *   *     

consensus_4446#0      CATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAG 1074
consensus_4446#2      CATGAGCCACCTGAAAACCTAGCTAGCGATATCACACGCCCAAATTTCTTCGGTCCTGAG 259
consensus_4446#1      -ATTGTTGTTCTAAGAACATGAACAAGGATGTTTT-TGTATTTTTTTCGTGCTTGTAGAT 260
                       **       ** * *** *    *  *** *     *      **** *   *   ** 

consensus_4446#0      AGTTCAGAGCCAC-------CGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGT 1127
consensus_4446#2      AGTTCAGAGCCAC-------CGACGACGCATCCAACTGCAAAAACCCCAATTCCATCAGT 312
consensus_4446#1      GATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTAT--ACCACACCGCTAACACC 318
                        *  ** **          * *** **   *** **  *   *** **   * * **  

consensus_4446#0      CTTCGGAGCTGCCATCACCAGCAACCA---AGGATGCAATGCACCTA----------ACT 1174
consensus_4446#2      CTTCGGAGCTGCCATCACCAGCAACCA---AGGATGCAATGCACCTA----------ACT 359
consensus_4446#1      CTTCCATGATTCCATCATGGACTACCACTTGCCACCCAGTTGCCCTCTCCATTACCTATC 378
                      ****   * * ******    * ****      *  ** *   ***           *  

consensus_4446#0      GCAGAACCCCAGTGGAGAACGCC--GGCAAACTGGGATGCGGGTCGGC--GACGCCGTCC 1230
consensus_4446#2      GCAAAACCCCAGGTAAGTACCCCCCAATGACCCAGAATTCCCACCGTCT-GGTTGCATCT 418
consensus_4446#1      ACAAGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACCAGGATCCTAGTTTCACAA 438
                       **  ** ** *      *   *                        *       *    

consensus_4446#0      AGGCATGACC-ACAACATG-CTCGACGGAATGCCCACACGTTTCTAGCCTGACTG-CCTG 1287
consensus_4446#2      AGAGCTAATTGATAGGGGG-CACTAGCGACTG--AGGAGAACTCATGTGTGG-TC-CCTG 473
consensus_4446#1      TGGATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGATTCACCTGTGAGTAATTTT 498
                       *   *              *      *  *           **     **  *    * 

consensus_4446#0      CACCAGCTGCAAACCCGGATAGGATTCAGTGTA---ATGCA-TCTGCACCTACTAGCTTC 1343
consensus_4446#2      TGT-AGTGGAGAACGCCGGCAAACTGGGATGCG---GGTCG-GCGACGCCGTCCAGGC-- 526
consensus_4446#1      TATCACTTGTGTATGATTG-AGCCTGTAATTTTTTCATTCGTACGACTATTTTGTGGT-- 555
                          *   *   *       *   *    *         *   *  *        *    

consensus_4446#0      CAATTCGTCAGAGCTAAGCCTGAACAAGTACTCATGAAGACCGTAAAATACTCTCCTCTT 1403
consensus_4446#2      ---ATGACCACAAC-ATGCTCGACGGAATGCCCA-------------------------- 556
consensus_4446#1      ---ACAGAT-TAACAATACTCTTAGTATCAGTT--------------------------- 584
                                 * * *  *       *                                 

consensus_4446#0      AAAGTAAAGAGTTACTACACGAATTGCAGTACTATATTTGCAACAAGTTAAAGTATGGTG 1463
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CTGCTTCTTCCAACTATTGATCTGGATCGATCCACCATCTCAGCCCACATATAGGTGACA 1523
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CACCATGGAAGAGGACGGCGACACCGTGGCAGGGCGGTTGATGGCGGTGGCCAGTGAGTG 1583
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ATGGCCGATGGCAGTTGAGGTGAAGGCGCTGCTTCGGGCCTCGCTGCCGGACGTTGGGCA 1643
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TCACCTTAACCAGCAAGGAGGTGTTCACCTGGGCCTGGATCAACAACCAGCAGCTGCTCC 1703
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ACATCGGCGACATTGGCAGAACAAGAAAGTCCTACATTTGCACATCGTGCTCCATGTGAT 1763
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TAGTTGCAGAGGATAGGGTGGAGTCCGCTGGGGATGGAGGTTGTTTGCTATTTTTCTTTT 1823
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ACTCGTCGTCTCTATGACATGAACAAGAATGTTTTTGTATTTTTTTCGTGCTTGCTAGAT 1883
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      GATGGAGGGCTGTTACTGTGCAACGTCGAGCCCATCTCTATACCACACCGCTACACCCTT 1943
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CCATGATTCCATCATGGACTACCACTTGCCACCCAGTTGCCCTCTCCATTACCTATCACA 2003
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      AGACACCGGCCAGTTATAGCAAGATCCAGCAAAGCCACCAGGATCCTAGTTTCACAATGG 2063
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ATTTTTGGCTGAATCATCTTTTTTGTTTTCTAGTTTGATTCACCTGTGAGTAATTTTTAT 2123
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      CACTTGTGTATGATTGAGCCTGTAATTTTTTCATTCGTACGACTATTTTGTGGTACAGAT 2183
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      TAACAATACTCTTAGTATCAGTTTTTACTCTTATACTGTGTATTGAACACATTAGTAAAC 2243
consensus_4446#2      ------------------------------------------------------------
consensus_4446#1      ------------------------------------------------------------
                                                                                  

consensus_4446#0      ATATTACTACACGATTGCTACGAGATCATGGGCTATATCGAGAGGAAGGTGGCAAT 2299
consensus_4446#2      --------------------------------------------------------
consensus_4446#1      --------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)