cluster # 446

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Oryza sativa
cluster # 446 cluster # 446 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_446#0 length = 931 sequences # 2

consensusID : consensus_446#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 931
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTCTTATCTTTTTAGGACGAGCTAAGTGTGCTTATCCATTAATTAGAGGGAATAAAGTACATGGAACTATCAGAAGTACAAGGGAAAAACAAAAGAGAAATTAAGCAAGGAAAGATACTTCACGGTTGCAAAGTACTTGCCAATTGCCAAAACATCATTATTATCAGAAAATTGTTTATATAGTCCTTATTTGAAAAGGAGGTAATATTTTCACCTCCTCTCCTAACATCCTAACCTTTTCTTTTCGCGTCAATTTCCAGTAAGGTTAAGCCAGCAACCAAAGGCCCAGTGAACAGCGAAATTCATTATTAAGTGAGTGGGTTGCCATGTTAGCATTGTTCCCAAGGTTGTGGCCAAGTATCTTCATATGCCTCCTTTTCTCTACAAGCCTTCAGATAACGGAGCTGCCTCCTTAGGTGCAATATCTCCAGTTTAAGAGGATCAGGAAGATCGTCCGTAGAAACAAGGCTCTGAAATTCAGCTTTCAACTTCTCATCTTCAATGCACAACCATGTGCTAGGATGTAACGACAGTAATAGAACAGTTAGANTGGTCTGTGTTTGATGGATAATTTGACAGGTTTCAGTGCTCAGAGGTGNATTGCAGAAGCATGTTTTCAGTCGGAGGGATAATCGGGNAAAGCTTATCAACATGTCCATTGCCTTCAGATACCACTTTGCCTGTAATGACATTTTTAAGCCCCTCATCATTCACTTGTGTACATCCGGAACAAGTTTCACTGAAAAATAATCCATCTCTTGATGACAGATTCCCACTTAGCAATGCGGTTGCTTCACAGCACACACTGGCTGCAATCTGGGAAATGGAATCTTCGTCCGTTAAAGACGAGCAACTACAACAGGGCTGCTTAGAACATTGCAGTTTGTGGACCAGCTGAAAAGCTTAGTATCA]

[-] EMBL C96924               [TTTTTTTTTTTTTTTTTTTTTCTTATCTTTTTAGGACGAGCTAAGTGTGCTTATCCATTAATTAGAGGGAATAAAGTACATGGAACTATCAGAAGTACAAGGGAAAAACAAAAGAGAAATTAAGCAAGGAAAGATACTTCACGGTTGCAAAGTACTTGCCAATTGCCAAAACATCATTATTATCAGAAAATTGTTTATATAGTCCTTATTTGAAAAGGAGGTAATATTTTCACCTCCTCTCCTAACATCCTAACCTTTTCTTTTCGCGTCAATTTCCAGTAAGGTTAAGCCAGCAACCAAAGGCCCAGTGAACAGCGAAATTCATTATTAAGTGAGTGGGTTGCCATGTTAGCATTGTTCCCAAGGTTGTGGCCAAGTATCTTCATATGCCTCCTTTTCTCTACAAGCCTTCAGATAACGGAGCTGCCTCCTTAGGTGCAATATCTCCAGTTTAAGAGGATCAGGAAGATCGTCCGTAGAAACAAGGCTCTGAAATTCAGCTTTCAACTTCTCATCTTCAATGCACAACCATGTGCTAGGATGTAACGACAGTAATAGAACAGTTAGANTGGTCTGTGTTTGATGGATAATTTGACAGGTTTCAGTGCTCAGAGGTGNATTGCAGAAGCATGTTTTCAGTCGGAGGGATAATCGGGN                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB646799             [                                                                                                                                                    AAAGTACTTGCCAATTGCCAAAACATCATTATTATCAGAAAATTGTTTATATAGTCCTTATTTGAAAAGGAGGTAATATTTTCACCTCCTCTCCTAACATCCTAACCTTTTCTTTTCGCGTCAATTTCCAGTAAGGTTAAGCCAGCAACCAAAGGCCCAGTGAACAGCGAAATTCATTATTAAGTGAGTGGGTTGCCATGTTAGCATTGTTCCCAAGGTTGTGGCCAAGTATCTTCATATGCCTCCTTTTCTCTACAAGCCTTCAGATAACGGAGCTGCCTCCTTAGGTGCAATATCTCCAGTTTAAGAGGATCAGGAAGATCGTCCGTAGAAACAAGGCTCTGAAATTCAGCTTTCAACTTCTCATCTTCAATGCACAACCATGTGCTAGGATGTAACGACAGTAATAGAACAGTTAGAAT GTCTGTGTTTGATGGATAA TTGACA GTTTCATTGCTCAGAGTTGAATTGCAGAAGCATG TTTCAGTC GA GGAT ATCGGTGAAAGCTTATCAACATGTCCATTGCCTTCAGATACCACTTTGCCTGTAATGACATTTTTAAGCCCCTCATCATTCACTTGTGTACATCCGGAACAAGTTTCACTGAAAAATAATCCATCTCTTGATGACAGATTCCCACTTAGCAATGCGGTTGCTTCACAGCACACACTGGCTGCAATCTGGGAAATGGAATCTTCGTCCGTTAAAGACGAGCAACTACAACAGGGCTGCTTAGAACATTGCAGTTTGTGGACCAGCTGAAAAGCTTAGTATCA]




>consensus_446#0
TTTTTTTTTTTTTTTTTTTTTCTTATCTTTTTAGGACGAGCTAAGTGTGCTTATCCATTA
ATTAGAGGGAATAAAGTACATGGAACTATCAGAAGTACAAGGGAAAAACAAAAGAGAAAT
TAAGCAAGGAAAGATACTTCACGGTTGCAAAGTACTTGCCAATTGCCAAAACATCATTAT
TATCAGAAAATTGTTTATATAGTCCTTATTTGAAAAGGAGGTAATATTTTCACCTCCTCT
CCTAACATCCTAACCTTTTCTTTTCGCGTCAATTTCCAGTAAGGTTAAGCCAGCAACCAA
AGGCCCAGTGAACAGCGAAATTCATTATTAAGTGAGTGGGTTGCCATGTTAGCATTGTTC
CCAAGGTTGTGGCCAAGTATCTTCATATGCCTCCTTTTCTCTACAAGCCTTCAGATAACG
GAGCTGCCTCCTTAGGTGCAATATCTCCAGTTTAAGAGGATCAGGAAGATCGTCCGTAGA
AACAAGGCTCTGAAATTCAGCTTTCAACTTCTCATCTTCAATGCACAACCATGTGCTAGG
ATGTAACGACAGTAATAGAACAGTTAGANTGGTCTGTGTTTGATGGATAATTTGACAGGT
TTCAGTGCTCAGAGGTGNATTGCAGAAGCATGTTTTCAGTCGGAGGGATAATCGGGNAAA
GCTTATCAACATGTCCATTGCCTTCAGATACCACTTTGCCTGTAATGACATTTTTAAGCC
CCTCATCATTCACTTGTGTACATCCGGAACAAGTTTCACTGAAAAATAATCCATCTCTTG
ATGACAGATTCCCACTTAGCAATGCGGTTGCTTCACAGCACACACTGGCTGCAATCTGGG
AAATGGAATCTTCGTCCGTTAAAGACGAGCAACTACAACAGGGCTGCTTAGAACATTGCA
GTTTGTGGACCAGCTGAAAAGCTTAGTATCA

clustalw multiple alignements is not computed in this case