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Oryza sativa
cluster # 4482 cluster # 4482       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4482#0 length = 3466 sequences # 2  
 consensus_4482#1 length = 462 sequences # 1  
consensusID : consensus_4482#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3466
fasta sequence 
                              [GGTAAGGCTCCAACTTCCCATCTGACAACAAACCAAAGGAAGAAACTGGCTGCTGACTGTGCTCTACAAGTGAAAGCATTTTCCTCAGCAGCCTTACAATTTGTTTGGCCAAGTACTGAAAAGAAGGTTATGGAAGTCCCAAGAGATAGATGTGGTTGGTGCCTTGCCTGTCAAAGTTCAGCAGGTGGAACTAAAAAAGCTTGTTTTCTTAACATGGCCACTGCAAATGCTTCTAAAGGATCTGCTCGAATTCTTAGTGGCATGCGTTTAATCAAGAATTCTGATAGCCATTTCCCCAGCATTGTTACTTATTTAAGCCACATGGAGGAAAGTTTGCGTGGCCTTTTAGTTGGTTCACTACAAGATGTGCAGCGGAGACAACAGTGGTATAATCAACTAAAAGATGCTTCCAACTGTGGAAATATAATACCCCTCTTGCTTGAATTGGAAAGTAATATTCGTGGTGTAGCATTTTCTACTAGCTGGCTGAAGCTAATAGATGACTGGCCTGTGGAATCTCCTAGTGCATCTGCTGGTGCATCCCGTCCTGCAGCATACCAAAAACGTGGAACTGGTGGAAGGCGGGGCAGAAAACGTTCAATGGCATCTGAATCTGCTCCTGTTACTGATGATGACAACAGCTGGAAAGAAGTGAATTGGTGGAGTGGAGGAAATGTTTCAAAGCGTATCTTACAGAGGGGGGCTCTACCAATTTTGACCATTAGAAAAGCTGCTCGTCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCTTATCATGAAGGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTTGGATTAAGCCAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATAAGATGGAAGGAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAAGTGTAGATTCTGACTATTCTGTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATAAGATATGCACTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATTTTGGAAGCAGAAGATAATCAGGATGGGGATGGGAAATTTTGGTTTTCTGAAAACCATATCCCACTATACTTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCAGGAATGTTAGATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAATCATCAATTGGAGATGTTTTCTTCTATCTGCTTCACAAGGGTGATGTATATCCTTGCACCTCATGCAAGAAGGATGTTTCCTTCAGGGATATCATAAAATGCAGCTCTTGTCAAGGTAATTGTCATAAAGAGTGCACATTAAGGTCTGTTGGTAGCAAAGAGGGCAATGCTGCTTCCAGTTTAACATGCAAGTTGTGCCTTCAGAAGCGTAGTCTTATGCTTACAAATTACAATACAAACGCAAGTTTCATCCTACCTCAACAGAAGAGTAATGTCCATCACGCAGTGGCAGCTCCCAAAATAATCTTTAAGGTTGGTTCTTCCCATTCCGCTGAACCAGCCACAAAGGTTGAAGCTCCGCCAATCGTGAAGGTAGAAGCCCAGCCAGTGGTCAAGAAGGAAACCTGGCCAGTTGTGAAGATGGAAACCCAGCCAACTGCAAATGTAGAAGCACAGCCAACTGCAAAAGTGGAAGCCTTTCCAATTTCGAATTTGGCAACTCAGAATAATGCAGGGGCGCAAGTCCAGCCTAAGACAAAATCTAAAAAACCCAAGCCAGAAAAACCGAGAAAATCCAAGAAGACTGAAGAGATCAAATACTTTGGTCTCGTGTGGAAGAAAAGCACTAATGACAAAAATAATAATGAAAATTCTGGAGAAGTGTTCAGGGCGAATGATGTTATCCTAAAAGGCAAGGATGGTGTAGGTTCATCAATAAAACCTACTTGCTGTCTTTGTAATAAGCCTTATTGCCCAGATTTCCTGTATGTCCGCTGCGAGAGGTGCAAAAAGTGGTTTCATGGCGATGCCTTGCAACTTGAGGAAGAAAAGATATTTGAATTGGTTTCATACCGATGTTGCAGATGCCGAAGGCGAGCCATACCAAAATGTCCTCATTCAGATGATTATAAGAAGCCTGAACCAGAATACAGTGAGCAAACAGTCGCTACGTCATCACAGTCAACTATGCTTTCTAGTGAGGAGAATTTTGCTGTAGCAGATCAAGATCCACTGCTTGCTTCATATGGCAGAGTTGAACCGTTTGGAGCACAAACAATGGATGCTGATTTATCGATGAACATGATGAGCTTTAACCCAGGAAATCAGAAACTATCAGTAAGAAGGGGACAAAACAAAAATTGTGAATATGTTGACCAATCCAGTATACATGTGGATGACTATTATATCCAGAATCAACCTCAAGGGAATGCAAACATCAATTTCAGTCACTCGAATGAATTCTCTTTGTCAGAGGCTGATGGTGTGGATGCTTCAGAGCTGTTGGGATGGGATTTTTCTCAAGGAAATACCAGTGCTGCCCCTTCTGATTTCGCAGCTAATTGCCCGTGGAATGACATCAGCTGTGGCAGCGTTGCTGGTGATGAATATGAACCACAGACTTATTTCTCATTCACCGAACTACTTGAAGCTGATGATACACAGTTCGATAATACATTTGGGATGTCTAATAGTGTGCAAGATGATGGTGACCAACAAGGAATTGGTTTTGATGAAATGGCTTTCATGATGGAAGATGGGGCCTCAAACATGCCTTTCCCAGCTATTGACTCCGCCTCTGACGAGGTAGCATGTGACAGGTGCAAGAATCCTCAGCCGCCACCTGATCTCAAATGCGCAGTATGTGGACTGCAGATGCACCGTCATTGCTCGCCTTGGGAGGATGGTGAACAGCCATCAGATAGTGCCGATTGGAGTTGTGGTGCCTGCCGGGAGTGGCGATGATGAGCTTCAAACTTTCATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAGCTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACACACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAATGGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATTATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATGTTCCTGACAATGTGTTGTCTTGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAATAGAAGTGCCTCTTTCTCCGAGTGGATGCGATATCCTTGATATATATAGCCTCGGCTTTT]

[+] EMBL AK066721             [GGTAAGGCTCCAACTTCCCATCTGACAACAAACCAAAGGAAGAAACTGGCTGCTGACTGTGCTCTACAAGTGAAAGCATTTTCCTCAGCAGCCTTACAATTTGTTTGGCCAAGTACTGAAAAGAAGGTTATGGAAGTCCCAAGAGATAGATGTGGTTGGTGCCTTGCCTGTCAAAGTTCAGCAGGTGGAACTAAAAAAGCTTGTTTTCTTAACATGGCCACTGCAAATGCTTCTAAAGGATCTGCTCGAATTCTTAGTGGCATGCGTTTAATCAAGAATTCTGATAGCCATTTCCCCAGCATTGTTACTTATTTAAGCCACATGGAGGAAAGTTTGCGTGGCCTTTTAGTTGGTTCACTACAAGATGTGCAGCGGAGACAACAGTGGTATAATCAACTAAAAGATGCTTCCAACTGTGGAAATATAATACCCCTCTTGCTTGAATTGGAAAGTAATATTCGTGGTGTAGCATTTTCTACTAGCTGGCTGAAGCTAATAGATGACTGGCCTGTGGAATCTCCTAGTGCATCTGCTGGTGCATCCCGTCCTGCAGCATACCAAAAACGTGGAACTGGTGGAAGGCGGGGCAGAAAACGTTCAATGGCATCTGAATCTGCTCCTGTTACTGATGATGACAACAGCTGGAAAGAAGTGAATTGGTGGAGTGGAGGAAATGTTTCAAAGCGTATCTTACAGAGGGGGGCTCTACCAATTTTGACCATTAGAAAAGCTGCTCGTCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCTTATCATGAAGGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTTGGATTAAGCCAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATAAGATGGAAGGAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAAGTGTAGATTCTGACTATTCTGTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATAAGATATGCACTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATTTTGGAAGCAGAAGATAATCAGGATGGGGATGGGAAATTTTGGTTTTCTGAAAACCATATCCCACTATACTTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCAGGAATGTTAGATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAATCATCAATTGGAGATGTTTTCTTCTATCTGCTTCACAAGGGTGATGTATATCCTTGCACCTCATGCAAGAAGGATGTTTCCTTCAGGGATATCATAAAATGCAGCTCTTGTCAAGGTAATTGTCATAAAGAGTGCACATTAAGGTCTGTTGGTAGCAAAGAGGGCAATGCTGCTTCCAGTTTAACATGCAAGTTGTGCCTTCAGAAGCGTAGTCTTATGCTTACAAATTACAATACAAACGCAAGTTTCATCCTACCTCAACAGAAGAGTAATGTCCATCACGCAGTGGCAGCTCCCAAAATAATCTTTAAGGTTGGTTCTTCCCATTCCGCTGAACCAGCCACAAAGGTTGAAGCTCCGCCAATCGTGAAGGTAGAAGCCCAGCCAGTGGTCAAGAAGGAAACCTGGCCAGTTGTGAAGATGGAAACCCAGCCAACTGCAAATGTAGAAGCACAGCCAACTGCAAAAGTGGAAGCCTTTCCAATTTCGAATTTGGCAACTCAGAATAATGCAGGGGCGCAAGTCCAGCCTAAGACAAAATCTAAAAAACCCAAGCCAGAAAAACCGAGAAAATCCAAGAAGACTGAAGAGATCAAATACTTTGGTCTCGTGTGGAAGAAAAGCACTAATGACAAAAATAATAATGAAAATTCTGGAGAAGTGTTCAGGGCGAATGATGTTATCCTAAAAGGCAAGGATGGTGTAGGTTCATCAATAAAACCTACTTGCTGTCTTTGTAATAAGCCTTATTGCCCAGATTTCCTGTATGTCCGCTGCGAGAGGTGCAAAAAGTGGTTTCATGGCGATGCCTTGCAACTTGAGGAAGAAAAGATATTTGAATTGGTTTCATACCGATGTTGCAGATGCCGAAGGCGAGCCATACCAAAATGTCCTCATTCAGATGATTATAAGAAGCCTGAACCAGAATACAGTGAGCAAACAGTCGCTACGTCATCACAGTCAACTATGCTTTCTAGTGAGGAGAATTTTGCTGTAGCAGATCAAGATCCACTGCTTGCTTCATATGGCAGAGTTGAACCGTTTGGAGCACAAACAATGGATGCTGATTTATCGATGAACATGATGAGCTTTAACCCAGGAAATCAGAAACTATCAGTAAGAAGGGGACAAAACAAAAATTGTGAATATGTTGACCAATCCAGTATACATGTGGATGACTATTATATCCAGAATCAACCTCAAGGGAATGCAAACATCAATTTCAGTCACTCGAATGAATTCTCTTTGTCAGAGGCTGATGGTGTGGATGCTTCAGAGCTGTTGGGATGGGATTTTTCTCAAGGAAATACCAGTGCTGCCCCTTCTGATTTCGCAGCTAATTGCCCGTGGAATGACATCAGCTGTGGCAGCGTTGCTGGTGATGAATATGAACCACAGACTTATTTCTCATTCACCGAACTACTTGAAGCTGATGATACACAGTTCGATAATACATTTGGGATGTCTAATAGTGTGCAAGATGATGGTGACCAACAAGGAATTGGTTTTGATGAAATGGCTTTCATGATGGAAGATGGGGCCTCAAACATGCCTTTCCCAGCTATTGACTCCGCCTCTGACGAGGTAGCATGTGACAGGTGCAAGAATCCTCAGCCGCCACCTGATCTCAAATGCGCAGTATGTGGACTGCAGATGCACCGTCATTGCTCGCCTTGGGAGGATGGTGAACAGCCATCAGATAGTGCCGATTGGAGTTGTGGTGCCTGCCGGGAGTGGCGATGATGAGCTTCAAACTTTCATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAGCTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACACACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAATGGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATTATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATGTTCCTGACAATGTGTTGTCTTGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAATAGAAGTGCCTCTTTCTCCGAGTGGATGCGATATCCTTGATATATATAGCCTCGGCTTTT]
[+] EMBL CF324830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCTTATCATGAAGGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTTGGATTAAGCCAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATAAGATGGAAGGAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAATTGTAGATTCTGACTATTCTGTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATAAGATATGCACTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATTTTGGAAGCAGAAGATAATCAGGATGGGGATGGGAAATTNTGGTTTTCTGAAAACCATATCCCACTATACTTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCAGGAATGTTAGATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_4482#0
GGTAAGGCTCCAACTTCCCATCTGACAACAAACCAAAGGAAGAAACTGGCTGCTGACTGT
GCTCTACAAGTGAAAGCATTTTCCTCAGCAGCCTTACAATTTGTTTGGCCAAGTACTGAA
AAGAAGGTTATGGAAGTCCCAAGAGATAGATGTGGTTGGTGCCTTGCCTGTCAAAGTTCA
GCAGGTGGAACTAAAAAAGCTTGTTTTCTTAACATGGCCACTGCAAATGCTTCTAAAGGA
TCTGCTCGAATTCTTAGTGGCATGCGTTTAATCAAGAATTCTGATAGCCATTTCCCCAGC
ATTGTTACTTATTTAAGCCACATGGAGGAAAGTTTGCGTGGCCTTTTAGTTGGTTCACTA
CAAGATGTGCAGCGGAGACAACAGTGGTATAATCAACTAAAAGATGCTTCCAACTGTGGA
AATATAATACCCCTCTTGCTTGAATTGGAAAGTAATATTCGTGGTGTAGCATTTTCTACT
AGCTGGCTGAAGCTAATAGATGACTGGCCTGTGGAATCTCCTAGTGCATCTGCTGGTGCA
TCCCGTCCTGCAGCATACCAAAAACGTGGAACTGGTGGAAGGCGGGGCAGAAAACGTTCA
ATGGCATCTGAATCTGCTCCTGTTACTGATGATGACAACAGCTGGAAAGAAGTGAATTGG
TGGAGTGGAGGAAATGTTTCAAAGCGTATCTTACAGAGGGGGGCTCTACCAATTTTGACC
ATTAGAAAAGCTGCTCGTCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCTTATCATGAA
GGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTTGGATTAAGC
CAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATAAGATGGAAG
GAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAAGTGTAGATTCTGACTATTCT
GTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATAAGATATGCA
CTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATTTTGGAAGCA
GAAGATAATCAGGATGGGGATGGGAAATTTTGGTTTTCTGAAAACCATATCCCACTATAC
TTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCAGGAATGTTA
GATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAATCATCAATTGGAGATGTT
TTCTTCTATCTGCTTCACAAGGGTGATGTATATCCTTGCACCTCATGCAAGAAGGATGTT
TCCTTCAGGGATATCATAAAATGCAGCTCTTGTCAAGGTAATTGTCATAAAGAGTGCACA
TTAAGGTCTGTTGGTAGCAAAGAGGGCAATGCTGCTTCCAGTTTAACATGCAAGTTGTGC
CTTCAGAAGCGTAGTCTTATGCTTACAAATTACAATACAAACGCAAGTTTCATCCTACCT
CAACAGAAGAGTAATGTCCATCACGCAGTGGCAGCTCCCAAAATAATCTTTAAGGTTGGT
TCTTCCCATTCCGCTGAACCAGCCACAAAGGTTGAAGCTCCGCCAATCGTGAAGGTAGAA
GCCCAGCCAGTGGTCAAGAAGGAAACCTGGCCAGTTGTGAAGATGGAAACCCAGCCAACT
GCAAATGTAGAAGCACAGCCAACTGCAAAAGTGGAAGCCTTTCCAATTTCGAATTTGGCA
ACTCAGAATAATGCAGGGGCGCAAGTCCAGCCTAAGACAAAATCTAAAAAACCCAAGCCA
GAAAAACCGAGAAAATCCAAGAAGACTGAAGAGATCAAATACTTTGGTCTCGTGTGGAAG
AAAAGCACTAATGACAAAAATAATAATGAAAATTCTGGAGAAGTGTTCAGGGCGAATGAT
GTTATCCTAAAAGGCAAGGATGGTGTAGGTTCATCAATAAAACCTACTTGCTGTCTTTGT
AATAAGCCTTATTGCCCAGATTTCCTGTATGTCCGCTGCGAGAGGTGCAAAAAGTGGTTT
CATGGCGATGCCTTGCAACTTGAGGAAGAAAAGATATTTGAATTGGTTTCATACCGATGT
TGCAGATGCCGAAGGCGAGCCATACCAAAATGTCCTCATTCAGATGATTATAAGAAGCCT
GAACCAGAATACAGTGAGCAAACAGTCGCTACGTCATCACAGTCAACTATGCTTTCTAGT
GAGGAGAATTTTGCTGTAGCAGATCAAGATCCACTGCTTGCTTCATATGGCAGAGTTGAA
CCGTTTGGAGCACAAACAATGGATGCTGATTTATCGATGAACATGATGAGCTTTAACCCA
GGAAATCAGAAACTATCAGTAAGAAGGGGACAAAACAAAAATTGTGAATATGTTGACCAA
TCCAGTATACATGTGGATGACTATTATATCCAGAATCAACCTCAAGGGAATGCAAACATC
AATTTCAGTCACTCGAATGAATTCTCTTTGTCAGAGGCTGATGGTGTGGATGCTTCAGAG
CTGTTGGGATGGGATTTTTCTCAAGGAAATACCAGTGCTGCCCCTTCTGATTTCGCAGCT
AATTGCCCGTGGAATGACATCAGCTGTGGCAGCGTTGCTGGTGATGAATATGAACCACAG
ACTTATTTCTCATTCACCGAACTACTTGAAGCTGATGATACACAGTTCGATAATACATTT
GGGATGTCTAATAGTGTGCAAGATGATGGTGACCAACAAGGAATTGGTTTTGATGAAATG
GCTTTCATGATGGAAGATGGGGCCTCAAACATGCCTTTCCCAGCTATTGACTCCGCCTCT
GACGAGGTAGCATGTGACAGGTGCAAGAATCCTCAGCCGCCACCTGATCTCAAATGCGCA
GTATGTGGACTGCAGATGCACCGTCATTGCTCGCCTTGGGAGGATGGTGAACAGCCATCA
GATAGTGCCGATTGGAGTTGTGGTGCCTGCCGGGAGTGGCGATGATGAGCTTCAAACTTT
CATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGAAGAA
ATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAGCTATTTGGCATT
GTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACACACCTTAGCAATA
TGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAATGGTTGATCGAAA
AAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATTATAGGATTAGAT
TGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATGTTCCTGACAATG
TGTTGTCTTGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAATAGAAGTGCCTCTT
TCTCCGAGTGGATGCGATATCCTTGATATATATAGCCTCGGCTTTT

consensusID : consensus_4482#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 462
fasta sequence 
                              [CATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGGTGGATCTGTAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAGCTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACACACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAATGGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATTATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATGTTCCTGACAATGTGTTGTCTTGGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAATAGAAGTGCCTCTTTCTCCGAGTGGATGCGAAAAAAAAAANAG]

[+] EMBL AU057968             [CATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGGTGGATCTGTAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAGCTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACACACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAATGGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATTATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATGTTCCTGACAATGTGTTGTCTTGGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAATAGAAGTGCCTCTTTCTCCGAGTGGATGCGAAAAAAAAAANAG]




>consensus_4482#1
CATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGGTGGA
TCTGTAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAG
CTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACAC
ACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAAT
GGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATT
ATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATG
TTCCTGACAATGTGTTGTCTTGGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAAT
AGAAGTGCCTCTTTCTCCGAGTGGATGCGAAAAAAAAAANAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4482#0      GGTAAGGCTCCAACTTCCCATCTGACAACAAACCAAAGGAAGAAACTGGCTGCTGACTGT 60
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GCTCTACAAGTGAAAGCATTTTCCTCAGCAGCCTTACAATTTGTTTGGCCAAGTACTGAA 120
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AAGAAGGTTATGGAAGTCCCAAGAGATAGATGTGGTTGGTGCCTTGCCTGTCAAAGTTCA 180
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GCAGGTGGAACTAAAAAAGCTTGTTTTCTTAACATGGCCACTGCAAATGCTTCTAAAGGA 240
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TCTGCTCGAATTCTTAGTGGCATGCGTTTAATCAAGAATTCTGATAGCCATTTCCCCAGC 300
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      ATTGTTACTTATTTAAGCCACATGGAGGAAAGTTTGCGTGGCCTTTTAGTTGGTTCACTA 360
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CAAGATGTGCAGCGGAGACAACAGTGGTATAATCAACTAAAAGATGCTTCCAACTGTGGA 420
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AATATAATACCCCTCTTGCTTGAATTGGAAAGTAATATTCGTGGTGTAGCATTTTCTACT 480
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AGCTGGCTGAAGCTAATAGATGACTGGCCTGTGGAATCTCCTAGTGCATCTGCTGGTGCA 540
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TCCCGTCCTGCAGCATACCAAAAACGTGGAACTGGTGGAAGGCGGGGCAGAAAACGTTCA 600
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      ATGGCATCTGAATCTGCTCCTGTTACTGATGATGACAACAGCTGGAAAGAAGTGAATTGG 660
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TGGAGTGGAGGAAATGTTTCAAAGCGTATCTTACAGAGGGGGGCTCTACCAATTTTGACC 720
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      ATTAGAAAAGCTGCTCGTCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCTTATCATGAA 780
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTTGGATTAAGC 840
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATAAGATGGAAG 900
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAAGTGTAGATTCTGACTATTCT 960
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATAAGATATGCA 1020
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATTTTGGAAGCA 1080
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GAAGATAATCAGGATGGGGATGGGAAATTTTGGTTTTCTGAAAACCATATCCCACTATAC 1140
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCAGGAATGTTA 1200
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAATCATCAATTGGAGATGTT 1260
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TTCTTCTATCTGCTTCACAAGGGTGATGTATATCCTTGCACCTCATGCAAGAAGGATGTT 1320
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TCCTTCAGGGATATCATAAAATGCAGCTCTTGTCAAGGTAATTGTCATAAAGAGTGCACA 1380
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TTAAGGTCTGTTGGTAGCAAAGAGGGCAATGCTGCTTCCAGTTTAACATGCAAGTTGTGC 1440
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CTTCAGAAGCGTAGTCTTATGCTTACAAATTACAATACAAACGCAAGTTTCATCCTACCT 1500
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CAACAGAAGAGTAATGTCCATCACGCAGTGGCAGCTCCCAAAATAATCTTTAAGGTTGGT 1560
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TCTTCCCATTCCGCTGAACCAGCCACAAAGGTTGAAGCTCCGCCAATCGTGAAGGTAGAA 1620
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GCCCAGCCAGTGGTCAAGAAGGAAACCTGGCCAGTTGTGAAGATGGAAACCCAGCCAACT 1680
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GCAAATGTAGAAGCACAGCCAACTGCAAAAGTGGAAGCCTTTCCAATTTCGAATTTGGCA 1740
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      ACTCAGAATAATGCAGGGGCGCAAGTCCAGCCTAAGACAAAATCTAAAAAACCCAAGCCA 1800
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GAAAAACCGAGAAAATCCAAGAAGACTGAAGAGATCAAATACTTTGGTCTCGTGTGGAAG 1860
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AAAAGCACTAATGACAAAAATAATAATGAAAATTCTGGAGAAGTGTTCAGGGCGAATGAT 1920
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GTTATCCTAAAAGGCAAGGATGGTGTAGGTTCATCAATAAAACCTACTTGCTGTCTTTGT 1980
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AATAAGCCTTATTGCCCAGATTTCCTGTATGTCCGCTGCGAGAGGTGCAAAAAGTGGTTT 2040
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CATGGCGATGCCTTGCAACTTGAGGAAGAAAAGATATTTGAATTGGTTTCATACCGATGT 2100
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TGCAGATGCCGAAGGCGAGCCATACCAAAATGTCCTCATTCAGATGATTATAAGAAGCCT 2160
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GAACCAGAATACAGTGAGCAAACAGTCGCTACGTCATCACAGTCAACTATGCTTTCTAGT 2220
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GAGGAGAATTTTGCTGTAGCAGATCAAGATCCACTGCTTGCTTCATATGGCAGAGTTGAA 2280
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CCGTTTGGAGCACAAACAATGGATGCTGATTTATCGATGAACATGATGAGCTTTAACCCA 2340
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GGAAATCAGAAACTATCAGTAAGAAGGGGACAAAACAAAAATTGTGAATATGTTGACCAA 2400
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      TCCAGTATACATGTGGATGACTATTATATCCAGAATCAACCTCAAGGGAATGCAAACATC 2460
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AATTTCAGTCACTCGAATGAATTCTCTTTGTCAGAGGCTGATGGTGTGGATGCTTCAGAG 2520
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CTGTTGGGATGGGATTTTTCTCAAGGAAATACCAGTGCTGCCCCTTCTGATTTCGCAGCT 2580
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      AATTGCCCGTGGAATGACATCAGCTGTGGCAGCGTTGCTGGTGATGAATATGAACCACAG 2640
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      ACTTATTTCTCATTCACCGAACTACTTGAAGCTGATGATACACAGTTCGATAATACATTT 2700
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GGGATGTCTAATAGTGTGCAAGATGATGGTGACCAACAAGGAATTGGTTTTGATGAAATG 2760
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GCTTTCATGATGGAAGATGGGGCCTCAAACATGCCTTTCCCAGCTATTGACTCCGCCTCT 2820
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GACGAGGTAGCATGTGACAGGTGCAAGAATCCTCAGCCGCCACCTGATCTCAAATGCGCA 2880
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GTATGTGGACTGCAGATGCACCGTCATTGCTCGCCTTGGGAGGATGGTGAACAGCCATCA 2940
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      GATAGTGCCGATTGGAGTTGTGGTGCCTGCCGGGAGTGGCGATGATGAGCTTCAAACTTT 3000
consensus_4482#1      ------------------------------------------------------------
                                                                                  

consensus_4482#0      CATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAG----- 3055
consensus_4482#1      CATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTCGAAGGTGGA 60
                      *******************************************************     

consensus_4482#0      -------AAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAG 3108
consensus_4482#1      TCTGTAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAG 120
                             *****************************************************

consensus_4482#0      CTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACAC 3168
consensus_4482#1      CTATTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACAC 180
                      ************************************************************

consensus_4482#0      ACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAAT 3228
consensus_4482#1      ACCTTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAAT 240
                      ************************************************************

consensus_4482#0      GGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATT 3288
consensus_4482#1      GGTTGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATT 300
                      ************************************************************

consensus_4482#0      ATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATG 3348
consensus_4482#1      ATAGGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATG 360
                      ************************************************************

consensus_4482#0      TTCCTGACAATGTGTTGTCTTGG-ATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAAT 3407
consensus_4482#1      TTCCTGACAATGTGTTGTCTTGGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAAT 420
                      *********************** ************************************

consensus_4482#0      AGAAGTGCCTCTTTCTCCGAGTGGATGCGATATCCTTGATATATATAGCCTCGGCTTTT 3466
consensus_4482#1      AGAAGTGCCTCTTTCTCCGAGTGGATGCGAAAAAAAAAANAG----------------- 462
                      ****************************** *      * *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)