|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4486#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2696 fasta sequence
[GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAATACCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTTTGATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGACATCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTAAGTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGCACGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCAATACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCGATGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGTTTTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACATTTAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATTAATCTTAAAAACATAGATTTTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTGTACTCACCCATTGTTCTGTTAGTACTTTGAAGTACATGCTCTTATGTTTCACCTACTTTTCTAAAATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAACAAGTGATTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAACATTATTTGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCATGATTTCAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACTATAGAGAAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTCTCCGTTCATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGATTTAATTTGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAACAAATATTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAATTCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCTGC]
[+] EMBL AK106521 [GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAATACCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTTTGATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGACATCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTAAGTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGCACGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCAATACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCGATGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGTTTTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACATTTAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATTAATCTTAAAAACATAGATTTTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTGTACTCACCCATTGTTCTGTTAGTACTTTGAAGTACATGCTCTTATGTTTCACCTACTTTTCTAAAATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAACAAGTGATTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAACATTATTTGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCATGATTTCAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACTATAGAGAAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTCTCCGTTCATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGATTTAATTTGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAACAAATATTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAATTCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCTGC]
consensusID : consensus_4486#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1518 fasta sequence
[AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAG-TGATATTGAATGAGTTTGGAGAGGAAATTGGGG-TTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAGTACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAAT]
[+] EMBL AK102627 [AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAG TGATATTGAATGAGTTTGGAGAGGAAATTGGGG TTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAGTACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAAT]
[+] EMBL CA305775 [ CGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGNCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTNCAGTTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTTGAAAGAGCAATGATCAATGAGGGGCAAGGCGGCTCACTTGCTGAACAGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4486#0 -GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGAC 59
consensus_4486#1 AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGAC 60
***********************************************************
consensus_4486#0 GACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCG 119
consensus_4486#1 GACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCG 120
************************************************************
consensus_4486#0 CTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCC 179
consensus_4486#1 CTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCC 180
************************************************************
consensus_4486#0 GGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTG 239
consensus_4486#1 GGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTG 240
************************************************************
consensus_4486#0 ATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAA 299
consensus_4486#1 ATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAA 300
************************************************************
consensus_4486#0 GGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTG 359
consensus_4486#1 GGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTG 360
************************** *********************************
consensus_4486#0 AAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCAC 419
consensus_4486#1 AAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCAC 420
************************************************************
consensus_4486#0 ATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTA 479
consensus_4486#1 ATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTA 480
************************************************************
consensus_4486#0 GACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAA 539
consensus_4486#1 GACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAA 540
************************************************************
consensus_4486#0 AACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCAT 599
consensus_4486#1 AACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCAT 600
************************************************************
consensus_4486#0 CAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTT 659
consensus_4486#1 CAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTT 660
************************************************************
consensus_4486#0 GAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTC 719
consensus_4486#1 GAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTC 720
************************************************************
consensus_4486#0 CGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAAT 779
consensus_4486#1 CGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAG---AAT 777
****************************************************** ***
consensus_4486#0 ACCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTT 839
consensus_4486#1 TCATCGC-----AGCTGCAAG-----AACTTCTGGAGTACAGTAAATCAGTACC---ACC 824
* * ** * **** * * * * * ** * * * * *
consensus_4486#0 TGATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGAC 899
consensus_4486#1 TAATCTCCGTCATG-ATAACAGTATTTCTACCTT--GTGTATTTGTGAGCAGGATCCAAT 881
* ** * * ** * ** * * *** *** * ** * * *
consensus_4486#0 ATCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTA 959
consensus_4486#1 TTCCCTGTCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACAT 941
** * * * ** * **** **** * * *** * **
consensus_4486#0 AGTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGC 1019
consensus_4486#1 GGATATT-TATCGTTGTAAAGGGATTTTACATGTCC-----ATAACTCGGATCAAGTT-C 994
* **** * ** * ** * * ** ** * * **** **** *
consensus_4486#0 ACGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCA 1079
consensus_4486#1 ATACATTACAGGCAGTGA-GGGAAGTTTATGAAGT-TCTGCCAGCTCGAGAATGGTC-CA 1051
* * * * ** * ** **** * ** ***** **** * * **
consensus_4486#0 ATACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCG 1139
consensus_4486#1 AGACAGAATCTCGCACAAACAA----GATAGTTGTCATA-GGTCGCAACTT-------GG 1099
* ****** * ** * * ** ** * * ** *** *
consensus_4486#0 ATGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGT 1199
consensus_4486#1 ATATCA----ATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACT-GATATCGAAGGGT 1154
** ** * * *** ** * * ** * * * *** ** **
consensus_4486#0 TTTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAAT 1259
consensus_4486#1 TT---GTTCATCCT-------GTACCCTGCACCTCCATGCAATCAAGTACTGCAAGGAGT 1204
** ** ** * * * *** ** ** * * * * * * ** * *
consensus_4486#0 CAGTACCACCTAATCTCCGTCATGATA-ACAGTATTTCTACCTTGTGTATTTGTGAGCAG 1318
consensus_4486#1 TTCTATGGC----TCCCCGAAGTAATGTGCTTTATGTTTGTCT-GTATATCTTCAAAGGT 1259
** * ** *** * ** * *** * * ** ** *** * *
consensus_4486#0 GATCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACA 1378
consensus_4486#1 GA--------CAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTA 1311
** * ** * * * ** * **** * *** * * * *
consensus_4486#0 TTTAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATT-AATCTTAAAAA 1437
consensus_4486#1 TCCG------ACGCGCCATGTTCAACTTTGGAAGAGGAAC-ATGCATCCAGTTACAAGAT 1364
* * ** ** ******** *** * * ** *** * * ** *
consensus_4486#0 CATAGATT-TTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTG 1496
consensus_4486#1 GATGAACTACTTGTAGAAGATTTTA--GTTAAGAGTAG---TATGCAAACTGATGATCGG 1419
** * * * ** ** * * * ** ** * * *** * * * ** *
consensus_4486#0 TACTCACCCATTGTTCTGTTAGTACT--TTGAAGTACATGCTCTTATGTTTCACCTACTT 1554
consensus_4486#1 CAA-CATTTCTCGTTGTAT-GGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGA-TT 1476
* ** * *** * * * *** *** ** * ** * *** * **
consensus_4486#0 TTCTAAAATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAAC 1614
consensus_4486#1 GGCAACAATA-------ACATACTGGGAGTTGAAATCTGATCCTCAAAT----------- 1518
* * **** **** * * **** ***
consensus_4486#0 AAGTGATTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAAC 1674
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 ATTATTTGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCA 1734
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 TGATTTCAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACT 1794
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 ATAGAGAAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTC 1854
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 TCCGTTCATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGAT 1914
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 TTAATTTGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGA 1974
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 CATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATAC 2034
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 ATTACAGGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAA 2094
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 CAAATATTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTG 2154
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 CCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGC 2214
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 AACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGG 2274
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 GTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGG 2334
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 CTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACA 2394
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 GCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACT 2454
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 TTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTT 2514
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 AAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAG 2574
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 CAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCC 2634
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 TCAAATTCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCT 2694
consensus_4486#1 ------------------------------------------------------------
consensus_4486#0 GC 2696
consensus_4486#1 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||