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Oryza sativa
cluster # 4503 cluster # 4503       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4503#0 length = 930 sequences # 3  

consensusID : consensus_4503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 930
fasta sequence
                              [CTCACTTCCCAAGCCAGAGGGCGCCCTCTCTCCCTCCCATGCACGCGCGCTCTCCCACTGAGCCTTCCAAGCCACCGCAGCCGCAGCCATGAGCGCCGGCGACACGCTCGACAAGCTCGTGGTCTTCCTCGCGAAGCGCGATGGCATCGACAAGCTGGTCAAGACGTTCCAGTACGTGTCCAAGCTCGCGCACTGGGCGGCGGAGTCGTCCAGCCCGGGCCTCGCCGGGCGCGCCAAGAACTGGGAGACGTCCGCGGGGCTCAGCCGCAAGGCCTTCCGCACGGGCCGCTTCCTCACGGGGCTCAACGGGCTGCGCCGCGCGCCGGGGGAG-TTCGGCGCGCTCGCCGTGCTCGCCAACGCCGGCGAGATGGTCTACTTCTTCTTCGACCACTTCACGTGGCTCTCCCGCGTCGGCGTCCTCGACGCCTGGCTCGCGCGACGCATGAGCTTCATCTCCGCCTTCGGCGAGTCCGTCGGCTACGTGTTCTTCATCGCCATGGACCTCATCATGATCAGGAGGGGCCTCAGGCAGGAGAGGAAGCTGCTCAGGGAGGGCGGGAAGGACAAGGACAAGGAGGTGAAGAAGATCCGGATGGACAGGGTGATGCGGCTCATGGCGACGGCCGCCAACGTCGCCGACCTCGTCATCGGCATCGCGGACATCGAGCCCAACCCGTTCTGCAACCACGCTGTCACGTTGGGGATCAGTGGGCTCGTCTCGGCGTGGGCCGGCTGGTACAGGAACTGGCCGTCGTGAGCTGTTCCAACTCTATTTTTCGCACGCTCTTCGGCCTTGTTACATCATAATGATTTTGCCAGGCACTGAACTCTGCTTCTGTAGCAAATTTTACAGTCGAGATACCGTTGGTGTATAGTCGCATAGATCGACGCATACTGTACTGAACAGCTCACTGGCAATCCCAACCAATC]

[+] EMBL AK073835             [CTCACTTCCCAAGCCAGAGGGCGCCCTCTCTCCCTCCCATGCACGCGCGCTCTCCCACTGAGCCTTCCAAGCCACCGCAGCCGCAGCCATGAGCGCCGGCGACACGCTCGACAAGCTCGTGGTCTTCCTCGCGAAGCGCGATGGCATCGACAAGCTGGTCAAGACGTTCCAGTACGTGTCCAAGCTCGCGCACTGGGCGGCGGAGTCGTCCAGCCCGGGCCTCGCCGGGCGCGCCAAGAACTGGGAGACGTCCGCGGGGCTCAGCCGCAAGGCCTTCCGCACGGGCCGCTTCCTCACGGGGCTCAACGGGCTGCGCCGCGCGCCGGGGGAG TTCGGCGCGCTCGCCGTGCTCGCCAACGCCGGCGAGATGGTCTACTTCTTCTTCGACCACTTCACGTGGCTCTCCCGCGTCGGCGTCCTCGACGCCTGGCTCGCGCGACGCATGAGCTTCATCTCCGCCTTCGGCGAGTCCGTCGGCTACGTGTTCTTCATCGCCATGGACCTCATCATGATCAGGAGGGGCCTCAGGCAGGAGAGGAAGCTGCTCAGGGAGGGCGGGAAGGACAAGGACAAGGAGGTGAAGAAGATCCGGATGGACAGGGTGATGCGGCTCATGGCGACGGCCGCCAACGTCGCCGACCTCGTCATCGGCATCGCGGACATCGAGCCCAACCCGTTCTGCAACCACGCTGTCACGTTGGGGATCAGTGGGCTCGTCTCGGCGTGGGCCGGCTGGTACAGGAACTGGCCGTCGTGAGCTGTTCCAACTCTATTTTTCGCACGCTCTTCGGCCTTGTTACATCATAATGATTTTGCCAGGCACTGAACTCTGCTTCTGTAGCAAATTTTACAGTCGAGATACCGTTGGTGTATAGTCGCATAGATCGACGCATACTGTACTGAACAGCTCACTGGCAATCCCAACCAATC]
[+] EMBL CF325034             [             CCAGAGGGCGCCCTCTCTCCCTCCCATGCACGCGCGCTCTCCCACTGAGCCTTCCAAGCCACCGCAGCCGCAGCCATGAGCGCCGGCGACACGCTCGACAAGCTCGTGGTCTTCCTCGCGAAGCGCGATGGCATCGACAAGCTGGTCAAGACGTTCCAGTACGTGTCCAAGCTCGCGCACTGGGCGGCGGAGTCGTCCAGCCCGGGCCTCGCCGGGCGCGCCAAGAACTGGGAGACGTCCGCGGGGCTCAGCCGCAAGGCCTTCCGCACGGGCCGCTTCCTCACGGGGCTCAACGGGCTGCGCCGCGCGCCGGGGGAG TTCGGCGCGCTCGCCGTGCTCGCCAACGCCGGCGAGATGGTCTACTTCTTCTTCGACCACTTCACGTGGCTCTCCCGCGTCGGCGTCCTCGACGCCTGGCTCGCGCGACGCATGAGCTTCATCTCCGCCTTCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF325059             [             CCAGAGGGCGCCCTCTCTCCCTCCCATGCACGCGCGCTCTCCCACTGAGCCTTCCAAGCCACCGCAGCCGCAGCCATGAGCGCCGGCGACACGCTCGACAAGCTCGTGGTCTTCCTCGCGAAGCGCGATGGCATCGACAAGCTGGTCAAGACGTTCCAGTACGTGTCCAAGCTCGCGCACTGGGCGGCGGAGTCGTCCAGCCCGGGCCTCGCCGGGCGCGCCAAGAACTGGGAGACGTCCGCGGGGCTCAGCCGCAAGGCCTTCCGCACGGGCCGCTTCCTCACGGGGCTCAACGGGCTGCGCCGCGCGCCGGGGGAGNTTCGGCGCGCTCGCCGTGCTCGCCAACGCCGGCGAGATGGTCTACTTCTTCTTCGACCACTTCACGTGGCTCTCCCGCGTCGGCGTCCTCGACGCCTGGCTCGCGCGACGCATGAGCTTCATCTCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_4503#0 CTCACTTCCCAAGCCAGAGGGCGCCCTCTCTCCCTCCCATGCACGCGCGCTCTCCCACTG AGCCTTCCAAGCCACCGCAGCCGCAGCCATGAGCGCCGGCGACACGCTCGACAAGCTCGT GGTCTTCCTCGCGAAGCGCGATGGCATCGACAAGCTGGTCAAGACGTTCCAGTACGTGTC CAAGCTCGCGCACTGGGCGGCGGAGTCGTCCAGCCCGGGCCTCGCCGGGCGCGCCAAGAA CTGGGAGACGTCCGCGGGGCTCAGCCGCAAGGCCTTCCGCACGGGCCGCTTCCTCACGGG GCTCAACGGGCTGCGCCGCGCGCCGGGGGAGTTCGGCGCGCTCGCCGTGCTCGCCAACGC CGGCGAGATGGTCTACTTCTTCTTCGACCACTTCACGTGGCTCTCCCGCGTCGGCGTCCT CGACGCCTGGCTCGCGCGACGCATGAGCTTCATCTCCGCCTTCGGCGAGTCCGTCGGCTA CGTGTTCTTCATCGCCATGGACCTCATCATGATCAGGAGGGGCCTCAGGCAGGAGAGGAA GCTGCTCAGGGAGGGCGGGAAGGACAAGGACAAGGAGGTGAAGAAGATCCGGATGGACAG GGTGATGCGGCTCATGGCGACGGCCGCCAACGTCGCCGACCTCGTCATCGGCATCGCGGA CATCGAGCCCAACCCGTTCTGCAACCACGCTGTCACGTTGGGGATCAGTGGGCTCGTCTC GGCGTGGGCCGGCTGGTACAGGAACTGGCCGTCGTGAGCTGTTCCAACTCTATTTTTCGC ACGCTCTTCGGCCTTGTTACATCATAATGATTTTGCCAGGCACTGAACTCTGCTTCTGTA GCAAATTTTACAGTCGAGATACCGTTGGTGTATAGTCGCATAGATCGACGCATACTGTAC TGAACAGCTCACTGGCAATCCCAACCAATC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)