cluster # 4519

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Oryza sativa
cluster # 4519 cluster # 4519 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4519#0 length = 3288 sequences # 3
consensusID : consensus_4519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3288
fasta sequence
                              [ATCTAGTTGGAGCAAACATAGCGATTGAAGCGCTCGGCCTTCGCCTCTAGGATGGCCAAATCGCGCTGGGAGAGGACACCTGGGGCAGCTAGCGTCTATATTAGGTAGCACACCACGGCGTCGCGGGTGCGTTGCAACGGCGGTCGTATGCTGAGCAACAAGAGGAGCACTTCCGTAGCTCCGCGGCCTTGGCGGCTGGTTTCGCAGGAGCGGCGCCACTTCCCTCTGCAGCCGCCGGAGTCAGAGAGATAGAGAGAGTTGTGCCATGGAGTCAGGAGACTTGGAGGGTGGGGTTTGATTTGGTTTGCTTCTAGAAGATTTCCTAAAGGGGAACGAACATGCATTTCATCATGGGCTTACATCCACCGCATGGACCCGCTGCTGCCCCATGGTTAACCTCGAGCTAGAGACAAGGAGCCTCCTTGTAGGGATGCAGCTCGGGGATAACTTGTAGTGGATGGCACTTGTCTCACTGATTTGGAAGGATGGGAAGCTCGGCGTCGAGGTGCGCCATTCTATAGGAGGTGGTGGGGAGGGTTTCGTGCTCCTAGCCTCACCTTCCTCTCGACCTCCGGCCTCTAGACCTTCCTTCCACGTCTTGGCAGCCCTCGTCTTGGCGGAGGATGGCTCTAAGGAGAGGACCGAGGAGACGAGTGAGCTCTCTCAGCCAAATTGGTGGGTTTCCCATCATCGGCCTTCGCCTCCTCCTGCGATCTCCCGCGCAGTCGAGCTTATGCTATTGTTGCTTCACCGCCGCTGCCTCCTCTTGTCACCCCACGCCACAGCGATGGTCTAGGAAGCGAGAAGGCCATGTGAGAAGCTCCTCGCTTGCCACCCACTGCTGGTCGCCACGCTTCCGCCTTCCCATCGATGAGCTGGCGAGCTCGACCTTGCCGGCCTCCACCGCTAATGTTTGTGCACACAGAAAAAGGAGAGAGGAGGTAGGGAAGGAAGAAATGATGGTATGTTTCACTAACACGTGCAGCTCACTGTAATTTTCTTTTTCTAATTGATGTGCCACGTAAACGCCACATCAGCTAAACCCAGGCTCCATGCTGCCCTGGGATCTCGTTGACACTCGTATTAGAACGTGAGGATACGTTGTACCAGGTTTTGAGATTAAGGGACCCGCTTGAAACTGACTCTAAGATGAGGGACATGAACTGAACTTCTTGTTCCTGGACTAATTAAAATCTGCTCGAGGGAGCCCATCATGGCCAGAAAACAATTAGCTCCTCGGCCCACGTGGGACACACGGCCCAAGTCGCGGGCGATACCTTCCCTCCCCCTTCCCGCCGCCGCTGTCCCTTGCTCCCACCTCCGCTCCTCGCCGCCGCCGCCGCGAGTAGTAGTGCGGGTCTCGCGCTGCCGCTTGGCTTGGCTCCCATGGACGCGGCGGCGCCGGAAGCGACGGGTGGCTTCTGCGGAGGCGGCGGCGGCCTCTCCACCGGCCGGAAGCTGGTGCCGTGGTCGAGCTGGGCGGAGTGGCGGCACGTGCGCGACGGCCTCTTCTCCGCCTCCCCCGCCGCCGCTCTTCGTAGGATCGCGGCGTGGAGGAGCAGAGGCACCCTCCCGGTCCCCGTCGATGTGACCGCGGCTTTCGTCGAGATACGGCTGCGGGATCCCTTCTTCCGGAGTGTAATGGCTGTGGATGATGCGCTGGAGTCGGAAGAGATGCTGTCGATGCTGTATAGTATGGCGATCATGAGGCTCGTAAATGGTTTTGTGGAGAACCCACATAAGAAAACTGGCTATTCAATATCTGAATTAGCTGAGGCTGTTGGAATACCACGAGTTCTTGTCGACATTCGTCATGAGAGTTCACATCGCACTCTTCCCTCTCTTCGGCTGCTACGATTGGCAGCCATTAAGGCATTTGATTGGTTGAAGTGTATTTACTGGGATTCCCAGACTAATGCTATTCCTGATGTTCAAGTTGAAGTAAGGTCAAAATTGCATGAGATCAATAACTTTATGAAGGGAAAAGATTCAATGAAAGCAAAGTCGGGTTCAAAAAGGAAACGTTCTGAGAAAATGATTTCGAGAAACATAAAATATGTACGCCGGCTTTACTACGCATGTCCTTCTGAGGTTGCCTTTGTTATATTGGACTTTTTCCAACGTGGTGCCCCAGAGTCCTCTGAAAATAGCGATGTGTTAGAAACTGATAAGGATGTAGATCAGTCATCTGATATTCACAGTGAAATATCAAATAATGATATGAGAACTATCATAACTAAATTATCAGAAAAGGAACCAAGGTTGCTGCTTGGCATACTGAAGTCAGTAATTGAAACAATTGAGACCATGGAAGACCTTGAAAACAAAGGTGAATACAATGCTAGCCTGCCAGCTAAAGTGGAACTTTTAAGTTCCCATGTTCTGTGGCTTGTGACAAAGTTAAAAG-AATTGAAGGATTCAGGTTGCATTGGAGTTGTCCATGAGATAGGAGTGCTCTCTTCAGACAGGAATGCAGTCCCACGTTTCTGTCTAGCAAAACTTCTGCGGAAGCTGTTGAGTTTGTCTATTATAGATGAAAGATGTATCATAGATGCAGCCCTAGTGCTGATTGAGATGGCCACCAACAATGTGCAGGAGAAACTGAGGAAGCTTCCTATGTTATCCCTGGGAAAGGTGGCTAGAGATTCTACCCTCCCAGAGCCCACCAAAGAAACGGAATCAGTTGAGGAAGCAACAGAGAAGCTGGAAATGTTCAAGTCGCGGTTGAAACAGAAGGATTTACGTTTGGCAGAAAATGACACCGGGGCTTCATTGAACACAATCATGCCAGAGAAACGTAACAGATGGTCTACAGCAAAGTCTTGGACCCCCTGTCCAATAGGAATGATACCTTGTTCATTTAGTTCAGTGGCTGTTCTTCCGACCCTTGACGTCGTAGATCATGAATCAAGAGATGAAATATTAGAG-CAACATGT-AAGTGTTGAGCCTGATGATCATACTGAGAGGATCGGCTATTATT-CTGACCCAGAGAAGCAATTGGATGCTGA-AAGAATTCCGGAATTATCAAGACCATCACCTGAAGAATGTGAGATTTCAGATATGCCAGAACTGGCATTTCCTCTGAAGGGTAGGTTGCTAGTTGGTGGGGTGTGGAAGATGGTGAGCGAAGAGGAGCTACTCTTTATCAAGTCAAAGATGAAAATTTTGTTGTAACAACAGCTAGTTCAGTTTTGTCATCTTAAATCAACAATTTCAGGCTGTAAAACGAACAAGGGTAGTACTGTGCTAGTTAAGAGAAAAATGTATCGTTTACCCCCCAAAAAAAAA]

[+] EMBL AK066052             [ATCTAGTTGGAGCAAACATAGCGATTGAAGCGCTCGGCCTTCGCCTCTAGGATGGCCAAATCGCGCTGGGAGAGGACACCTGGGGCAGCTAGCGTCTATATTAGGTAGCACACCACGGCGTCGCGGGTGCGTTGCAACGGCGGTCGTATGCTGAGCAACAAGAGGAGCACTTCCGTAGCTCCGCGGCCTTGGCGGCTGGTTTCGCAGGAGCGGCGCCACTTCCCTCTGCAGCCGCCGGAGTCAGAGAGATAGAGAGAGTTGTGCCATGGAGTCAGGAGACTTGGAGGGTGGGGTTTGATTTGGTTTGCTTCTAGAAGATTTCCTAAAGGGGAACGAACATGCATTTCATCATGGGCTTACATCCACCGCATGGACCCGCTGCTGCCCCATGGTTAACCTCGAGCTAGAGACAAGGAGCCTCCTTGTAGGGATGCAGCTCGGGGATAACTTGTAGTGGATGGCACTTGTCTCACTGATTTGGAAGGATGGGAAGCTCGGCGTCGAGGTGCGCCATTCTATAGGAGGTGGTGGGGAGGGTTTCGTGCTCCTAGCCTCACCTTCCTCTCGACCTCCGGCCTCTAGACCTTCCTTCCACGTCTTGGCAGCCCTCGTCTTGGCGGAGGATGGCTCTAAGGAGAGGACCGAGGAGACGAGTGAGCTCTCTCAGCCAAATTGGTGGGTTTCCCATCATCGGCCTTCGCCTCCTCCTGCGATCTCCCGCGCAGTCGAGCTTATGCTATTGTTGCTTCACCGCCGCTGCCTCCTCTTGTCACCCCACGCCACAGCGATGGTCTAGGAAGCGAGAAGGCCATGTGAGAAGCTCCTCGCTTGCCACCCACTGCTGGTCGCCACGCTTCCGCCTTCCCATCGATGAGCTGGCGAGCTCGACCTTGCCGGCCTCCACCGCTAATGTTTGTGCACACAGAAAAAGGAGAGAGGAGGTAGGGAAGGAAGAAATGATGGTATGTTTCACTAACACGTGCAGCTCACTGTAATTTTCTTTTTCTAATTGATGTGCCACGTAAACGCCACATCAGCTAAACCCAGGCTCCATGCTGCCCTGGGATCTCGTTGACACTCGTATTAGAACGTGAGGATACGTTGTACCAGGTTTTGAGATTAAGGGACCCGCTTGAAACTGACTCTAAGATGAGGGACATGAACTGAACTTCTTGTTCCTGGACTAATTAAAATCTGCTCGAGGGAGCCCATCATGGCCAGAAAACAATTAGCTCCTCGGCCCACGTGGGACACACGGCCCAAGTCGCGGGCGATACCTTCCCTCCCCCTTCCCGCCGCCGCTGTCCCTTGCTCCCACCTCCGCTCCTCGCCGCCGCCGCCGCGAGTAGTAGTGCGGGTCTCGCGCTGCCGCTTGGCTTGGCTCCCATGGACGCGGCGGCGCCGGAAGCGACGGGTGGCTTCTGCGGAGGCGGCGGCGGCCTCTCCACCGGCCGGAAGCTGGTGCCGTGGTCGAGCTGGGCGGAGTGGCGGCACGTGCGCGACGGCCTCTTCTCCGCCTCCCCCGCCGCCGCTCTTCGTAGGATCGCGGCGTGGAGGAGCAGAGGCACCCTCCCGGTCCCCGTCGATGTGACCGCGGCTTTCGTCGAGATACGGCTGCGGGATCCCTTCTTCCGGAGTGTAATGGCTGTGGATGATGCGCTGGAGTCGGAAGAGATGCTGTCGATGCTGTATAGTATGGCGATCATGAGGCTCGTAAATGGTTTTGTGGAGAACCCACATAAGAAAACTGGCTATTCAATATCTGAATTAGCTGAGGCTGTTGGAATACCACGAGTTCTTGTCGACATTCGTCATGAGAGTTCACATCGCACTCTTCCCTCTCTTCGGCTGCTACGATTGGCAGCCATTAAGGCATTTGATTGGTTGAAGTGTATTTACTGGGATTCCCAGACTAATGCTATTCCTGATGTTCAAGTTGAAGTAAGGTCAAAATTGCATGAGATCAATAACTTTATGAAGGGAAAAGATTCAATGAAAGCAAAGTCGGGTTCAAAAAGGAAACGTTCTGAGAAAATGATTTCGAGAAACATAAAATATGTACGCCGGCTTTACTACGCATGTCCTTCTGAGGTTGCCTTTGTTATATTGGACTTTTTCCAACGTGGTGCCCCAGAGTCCTCTGAAAATAGCGATGTGTTAGAAACTGATAAGGATGTAGATCAGTCATCTGATATTCACAGTGAAATATCAAATAATGATATGAGAACTATCATAACTAAATTATCAGAAAAGGAACCAAGGTTGCTGCTTGGCATACTGAAGTCAGTAATTGAAACAATTGAGACCATGGAAGACCTTGAAAACAAAGGTGAATACAATGCTAGCCTGCCAGCTAAAGTGGAACTTTTAAGTTCCCATGTTCTGTGGCTTGTGACAAAGTTAAAAG AATTGAAGGATTCAGGTTGCATTGGAGTTGTCCATGAGATAGGAGTGCTCTCTTCAGACAGGAATGCAGTCCCACGTTTCTGTCTAGCAAAACTTCTGCGGAAGCTGTTGAGTTTGTCTATTATAGATGAAAGATGTATCATAGATGCAGCCCTAGTGCTGATTGAGATGGCCACCAACAATGTGCAGGAGAAACTGAGGAAGCTTCCTATGTTATCCCTGGGAAAGGTGGCTAGAGATTCTACCCTCCCAGAGCCCACCAAAGAAACGGAATCAGTTGAGGAAGCAACAGAGAAGCTGGAAATGTTCAAGTCGCGGTTGAAACAGAAGGATTTACGTTTGGCAGAAAATGACACCGGGGCTTCATTGAACACAATCATGCCAGAGAAACGTAACAGATGGTCTACAGCAAAGTCTTGGACCCCCTGTCCAATAGGAATGATACCTTGTTCATTTAGTTCAGTGGCTGTTCTTCCGACCCTTGACGTCGTAGATCATGAATCAAGAGATGAAATATTAGAG CAACATGT AAGTGTTGAGCCTGATGATCATACTGAGAGGATCGGCTATTATT CTGACCCAGAGAAGCAATTGGATGCTGA AAGAATTCCGGAATTATCAAGACCATCACCTGAAGAATGTGAGATTTCAGATATGCCAGAACTGGCATTTCCTCTGAAGGGTAGGTTGCTAGTTGGTGGGGTGTGGAAGATGGTGAGCGAAGAGGAGCTACTCTTTATCAAGTCAAAGATGAAAATTTTGTTGTAACAACAGCTAGTTCAGTTTTGTCATCTTAAATCAACAATTTCAGGCTGTAAAACGAACAAGGGTAGTACTGTGCTAGTTAAGAGAAAAATGTATCGTTTACCCCCC         ]
[+] EMBL AU032968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cgagGAAACTGATAAGGATGTAGATCAGTCATCTGATATTCACAGTGAAATATCAAATAATGATATGAGANCTATCATAACTAAATTATCAGAAAAGGAACCAAGGTTGCTGCTTGGCATACTGAAGTCAGTAATTGAAACANTTGAGACCATGGAAGACCTTGAAAACAAAGGTGAATACAATGCTAGCCTGCCAGCTAAAGTGGAACTTTTAAGTTCCCATGTTCTGTGGCTTGTGACAAAGTTAAAAGNATTTGAAGGATTCAGGTTGCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU032969             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGAGCCAACATGTAAAGTGTTGAGCCTGATGATCATACTGAGGGGATCGGCTANTATTACTGACCCAGAGAAGCAANTGGATGCTGANAAGAATTCCGGAATTATCAAGACCATCACCTGAAGAATGTGAGATTTCAGATATGCCAGNACTGGCATTTCCTCTGAAGGGTAGGTTGCTAGTTGGTGGGGTGTGGAAGATGGTGANCGAAGAGGAGCTACTCTTTATCAAGTCAAAGATGAAAATTTTGTTGTAACAACAGCTAGTTCAGTTTTGTCATCTTAAATCAACAATTTCAGGCTGTAAAACGNACAAGGGTAGTACTGTGCTAGTTAAGAGAAAAATGTATCGTTTACCCCCCAAAAAAAAA]




>consensus_4519#0
ATCTAGTTGGAGCAAACATAGCGATTGAAGCGCTCGGCCTTCGCCTCTAGGATGGCCAAA
TCGCGCTGGGAGAGGACACCTGGGGCAGCTAGCGTCTATATTAGGTAGCACACCACGGCG
TCGCGGGTGCGTTGCAACGGCGGTCGTATGCTGAGCAACAAGAGGAGCACTTCCGTAGCT
CCGCGGCCTTGGCGGCTGGTTTCGCAGGAGCGGCGCCACTTCCCTCTGCAGCCGCCGGAG
TCAGAGAGATAGAGAGAGTTGTGCCATGGAGTCAGGAGACTTGGAGGGTGGGGTTTGATT
TGGTTTGCTTCTAGAAGATTTCCTAAAGGGGAACGAACATGCATTTCATCATGGGCTTAC
ATCCACCGCATGGACCCGCTGCTGCCCCATGGTTAACCTCGAGCTAGAGACAAGGAGCCT
CCTTGTAGGGATGCAGCTCGGGGATAACTTGTAGTGGATGGCACTTGTCTCACTGATTTG
GAAGGATGGGAAGCTCGGCGTCGAGGTGCGCCATTCTATAGGAGGTGGTGGGGAGGGTTT
CGTGCTCCTAGCCTCACCTTCCTCTCGACCTCCGGCCTCTAGACCTTCCTTCCACGTCTT
GGCAGCCCTCGTCTTGGCGGAGGATGGCTCTAAGGAGAGGACCGAGGAGACGAGTGAGCT
CTCTCAGCCAAATTGGTGGGTTTCCCATCATCGGCCTTCGCCTCCTCCTGCGATCTCCCG
CGCAGTCGAGCTTATGCTATTGTTGCTTCACCGCCGCTGCCTCCTCTTGTCACCCCACGC
CACAGCGATGGTCTAGGAAGCGAGAAGGCCATGTGAGAAGCTCCTCGCTTGCCACCCACT
GCTGGTCGCCACGCTTCCGCCTTCCCATCGATGAGCTGGCGAGCTCGACCTTGCCGGCCT
CCACCGCTAATGTTTGTGCACACAGAAAAAGGAGAGAGGAGGTAGGGAAGGAAGAAATGA
TGGTATGTTTCACTAACACGTGCAGCTCACTGTAATTTTCTTTTTCTAATTGATGTGCCA
CGTAAACGCCACATCAGCTAAACCCAGGCTCCATGCTGCCCTGGGATCTCGTTGACACTC
GTATTAGAACGTGAGGATACGTTGTACCAGGTTTTGAGATTAAGGGACCCGCTTGAAACT
GACTCTAAGATGAGGGACATGAACTGAACTTCTTGTTCCTGGACTAATTAAAATCTGCTC
GAGGGAGCCCATCATGGCCAGAAAACAATTAGCTCCTCGGCCCACGTGGGACACACGGCC
CAAGTCGCGGGCGATACCTTCCCTCCCCCTTCCCGCCGCCGCTGTCCCTTGCTCCCACCT
CCGCTCCTCGCCGCCGCCGCCGCGAGTAGTAGTGCGGGTCTCGCGCTGCCGCTTGGCTTG
GCTCCCATGGACGCGGCGGCGCCGGAAGCGACGGGTGGCTTCTGCGGAGGCGGCGGCGGC
CTCTCCACCGGCCGGAAGCTGGTGCCGTGGTCGAGCTGGGCGGAGTGGCGGCACGTGCGC
GACGGCCTCTTCTCCGCCTCCCCCGCCGCCGCTCTTCGTAGGATCGCGGCGTGGAGGAGC
AGAGGCACCCTCCCGGTCCCCGTCGATGTGACCGCGGCTTTCGTCGAGATACGGCTGCGG
GATCCCTTCTTCCGGAGTGTAATGGCTGTGGATGATGCGCTGGAGTCGGAAGAGATGCTG
TCGATGCTGTATAGTATGGCGATCATGAGGCTCGTAAATGGTTTTGTGGAGAACCCACAT
AAGAAAACTGGCTATTCAATATCTGAATTAGCTGAGGCTGTTGGAATACCACGAGTTCTT
GTCGACATTCGTCATGAGAGTTCACATCGCACTCTTCCCTCTCTTCGGCTGCTACGATTG
GCAGCCATTAAGGCATTTGATTGGTTGAAGTGTATTTACTGGGATTCCCAGACTAATGCT
ATTCCTGATGTTCAAGTTGAAGTAAGGTCAAAATTGCATGAGATCAATAACTTTATGAAG
GGAAAAGATTCAATGAAAGCAAAGTCGGGTTCAAAAAGGAAACGTTCTGAGAAAATGATT
TCGAGAAACATAAAATATGTACGCCGGCTTTACTACGCATGTCCTTCTGAGGTTGCCTTT
GTTATATTGGACTTTTTCCAACGTGGTGCCCCAGAGTCCTCTGAAAATAGCGATGTGTTA
GAAACTGATAAGGATGTAGATCAGTCATCTGATATTCACAGTGAAATATCAAATAATGAT
ATGAGAACTATCATAACTAAATTATCAGAAAAGGAACCAAGGTTGCTGCTTGGCATACTG
AAGTCAGTAATTGAAACAATTGAGACCATGGAAGACCTTGAAAACAAAGGTGAATACAAT
GCTAGCCTGCCAGCTAAAGTGGAACTTTTAAGTTCCCATGTTCTGTGGCTTGTGACAAAG
TTAAAAGAATTGAAGGATTCAGGTTGCATTGGAGTTGTCCATGAGATAGGAGTGCTCTCT
TCAGACAGGAATGCAGTCCCACGTTTCTGTCTAGCAAAACTTCTGCGGAAGCTGTTGAGT
TTGTCTATTATAGATGAAAGATGTATCATAGATGCAGCCCTAGTGCTGATTGAGATGGCC
ACCAACAATGTGCAGGAGAAACTGAGGAAGCTTCCTATGTTATCCCTGGGAAAGGTGGCT
AGAGATTCTACCCTCCCAGAGCCCACCAAAGAAACGGAATCAGTTGAGGAAGCAACAGAG
AAGCTGGAAATGTTCAAGTCGCGGTTGAAACAGAAGGATTTACGTTTGGCAGAAAATGAC
ACCGGGGCTTCATTGAACACAATCATGCCAGAGAAACGTAACAGATGGTCTACAGCAAAG
TCTTGGACCCCCTGTCCAATAGGAATGATACCTTGTTCATTTAGTTCAGTGGCTGTTCTT
CCGACCCTTGACGTCGTAGATCATGAATCAAGAGATGAAATATTAGAGCAACATGTAAGT
GTTGAGCCTGATGATCATACTGAGAGGATCGGCTATTATTCTGACCCAGAGAAGCAATTG
GATGCTGAAAGAATTCCGGAATTATCAAGACCATCACCTGAAGAATGTGAGATTTCAGAT
ATGCCAGAACTGGCATTTCCTCTGAAGGGTAGGTTGCTAGTTGGTGGGGTGTGGAAGATG
GTGAGCGAAGAGGAGCTACTCTTTATCAAGTCAAAGATGAAAATTTTGTTGTAACAACAG
CTAGTTCAGTTTTGTCATCTTAAATCAACAATTTCAGGCTGTAAAACGAACAAGGGTAGT
ACTGTGCTAGTTAAGAGAAAAATGTATCGTTTACCCCCCAAAAAAAAA
clustalw multiple alignements is not computed in this case