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Oryza sativa
cluster # 452 cluster # 452       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_452#0 length = 2780 sequences # 2  

consensusID : consensus_452#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2780
fasta sequence
                              [CCCAATCTCCCTGCGGTAGAACCCTAGAGGAACCTTCTAGAACCCCCGAGCCCCCCCCCCCCCGCGGCCCCCGGCGAAGCCAGCGAGATGATTCTCCGGACTCCACCGCAGCGGAAGCGGCGGGCGGACTCCGACGTCGACGCCGCCGCCGCCACCGCCACCACCCGGAGCCCCGTTTCCGACCGCCGCCTCGTGCTCTACGACCGGCCCACCGCCCTCGTACCCGCTGGCGTCCCCGGGGAGCCCATGGATGACATGGTCTGCACGTACCACTGCCGTCAGATGGTGAAATCAGAATTTATGGTGGCATTGGACACTGCAGAGAAGCAAGTTCAGGAGTATCGAGCCACACTTGATGATATGGAGGAACGATTATCCAAGAGTGAGGATGAGAGGGCAACATGCCAGGACAAACTGAATTATGTCGAGCAAGAATTGGCAGCAACAAAAGGTCGGGAAAGTGCAATGCAAGAGCGATTATTAAAGGAGGTGGGTGACTTTCAGGAACGCTACTGTGATCAAATCAAGAAGATAGGGGAACTTGAGACGCAGCTGAAAAAAGAGATTGATTCTCGAATTGCTGCTGAATCATCGTCAGCATCCGCAAAGGAGTCAGTCAAGGAGTTGGAGGGGAATTTGCAGCGTTTATCTGAAAATTCAGAAAGGGAGAAGAAAGCCCTTAAGAAGAAGCTTTCATACTTGCAAGACGACACAAAATTATCCATTTCTAAACTAAATGCGGAGCTTGAAAGAATGAGACTCAGGGCGCTAAACTCTGAGGACGAAGCAAAGTTGCTGAATGAACAGTTGGAGGACTTAAAAAAGCAACTAGATGAGAGTGTTCGTGAAAATAATGAGATGGAGCACAGGCTATTGAATTGCAGTTCTTTATCTTATGAACGTACTCCATCAGACGATCAGAAGTTGATAAAGCTTTTGCAAGAGGAGCTCCGGAATTATGAAAAAGAAGTTGATGAAGCTAGAAGGTTGAAGTCTTCCCACACAAATGTTGAGTTACTTAAAGAAAAAATATTGGAGGAACAGGGGTGCAGGGAGAGAGCAGAAATGGAATTATCTAAGCTGCAGGAAATTGAAGCTAAAGCACAGAAGTTGGAGCTTGAATTAGCATCATGCACAGCATTGCTCAGCAACATACCTGATGTATCTTCTTTTGGTGATATACCTCAAAAGATCGCAGATTTGCAGAAGCAAGCATTGACAAATTTAAATAAAGTTGGTGAGGTAACATCACAGTTGAAAGAATTAAAGGTTGCATTGGAATTTGCTGATCTTAGCAAGCAACGGGCAGAAGGTGAAGCAACCCTTGCCAAAGAGAGGGCTGAAAGTGCTACTAGGGAGATCAAGCGGCTTGAACTTCTGCTTGCTGCCATCAGTGAAGAAAGGGATAGATTAAGAAAGGACCATGCTGTGTCGAAATCTAGGGATGGAGATGATGCATCATCCAAGAATATGGAATCGGATCTATCTCGAATGGAAAAGGTAGTAACAGAACTGGAGAGCACTATACGTGACCAGAGAGAACTAATTAGTCAACAGCACACTGAGCTCAATTTGATGAATGAAAAATTGAGCATTGAATCAAGAAAAGCAAAATCATTGGAGCGAGATGGAGATCAACTACGCTCACAGGTGGCTTTACTTGAGTCAAAGCTGGGCCATGGAGATTACTCTGCCTCTAGCACAAAAGTACTGCGTATGGTAAATACTCTTGCAGTGGACAATGAAGCAAAGCAGACTATAGAGGCATTGCAAGCTGAATTGAAGAAAACGAAAGAGAGGCTACAAGCAGTTGAAGAACTAAAAGGACAAGCTGATGTTGGAACTGTGGTTGATGTGAATATTGCTGAAAAGCTAGCACAGCTTAAAAATCAAATTGCAACCCTAGAGAAACGTGAAGAAAGATATAAGGCAGTATTTGCAGAGAGGATCTCAGTTTTCCGAAAGGCTTGCTGCTCGCTCTTTGGTTATAAGATAGTGATGAATGATCAGCAACAGTCAAATGGGATCCCTGTAACACGTTTTATTCTGCATTCTGTTTACGCCCAAAGTGATGATGAGAAGCTTGAGTTTGACTACGAATCTGGAAGCACCAATATTGTGGTCAATGACTACACTTCTCAACATGAAATTGCTCAGCAGGTAGATATTTTCATACGAAAGATGAATTCTATCCCGGCCTTCACAGCTAACCTGACAATGGAATCCTTCAACAAAAGAAGTATCTGTTGAAGATAAAAGTTCAGTGAGAATTCATATTGTTGGATTTTGTGAGTATGCTTTCTTCGAGTCACCGAAGATTGGAAAATGTATTTCATTTTGGAAACACTCTGGGCTCATGTCTTTCCGATGCATTATCACAGCTTCTCGTAGTAACTGGAGATGTCCAAATTGTTATGTTGTGGCAGCCCTGGACCGTGGTCGAGCAAGCTCCTAGATATAGCAAGGTTCCCCCCACCCTTTTTCATATATACTAAGGTGCAATTGATATACCTTGTGGTTTTTTATATGTTTTAACGATTTGTTCAAATGTCAAAAGCTGAGGAGCACGGCGTGTTACTAATTGGACATGAGTAGAGAGTTGATGCCGGGCTGTCACATACTCACATGGATTCACCTCTGTTATGATTTTTGACAAAGTATATATGAATGCGAGCGTTACTTGTACTGTGGCCTGGACTGAAGCATGAGCTTTTGTAAACTGTAGCGAACTATCATATGTAACTGAGCCATGTGAATTGTTAATTACCGCAAACCAGAAT]

[+] EMBL AK073302             [CCCAATCTCCCTGCGGTAGAACCCTAGAGGAACCTTCTAGAACCCCCGAGCCCCCCCCCCCCCGCGGCCCCCGGCGAAGCCAGCGAGATGATTCTCCGGACTCCACCGCAGCGGAAGCGGCGGGCGGACTCCGACGTCGACGCCGCCGCCGCCACCGCCACCACCCGGAGCCCCGTTTCCGACCGCCGCCTCGTGCTCTACGACCGGCCCACCGCCCTCGTACCCGCTGGCGTCCCCGGGGAGCCCATGGATGACATGGTCTGCACGTACCACTGCCGTCAGATGGTGAAATCAGAATTTATGGTGGCATTGGACACTGCAGAGAAGCAAGTTCAGGAGTATCGAGCCACACTTGATGATATGGAGGAACGATTATCCAAGAGTGAGGATGAGAGGGCAACATGCCAGGACAAACTGAATTATGTCGAGCAAGAATTGGCAGCAACAAAAGGTCGGGAAAGTGCAATGCAAGAGCGATTATTAAAGGAGGTGGGTGACTTTCAGGAACGCTACTGTGATCAAATCAAGAAGATAGGGGAACTTGAGACGCAGCTGAAAAAAGAGATTGATTCTCGAATTGCTGCTGAATCATCGTCAGCATCCGCAAAGGAGTCAGTCAAGGAGTTGGAGGGGAATTTGCAGCGTTTATCTGAAAATTCAGAAAGGGAGAAGAAAGCCCTTAAGAAGAAGCTTTCATACTTGCAAGACGACACAAAATTATCCATTTCTAAACTAAATGCGGAGCTTGAAAGAATGAGACTCAGGGCGCTAAACTCTGAGGACGAAGCAAAGTTGCTGAATGAACAGTTGGAGGACTTAAAAAAGCAACTAGATGAGAGTGTTCGTGAAAATAATGAGATGGAGCACAGGCTATTGAATTGCAGTTCTTTATCTTATGAACGTACTCCATCAGACGATCAGAAGTTGATAAAGCTTTTGCAAGAGGAGCTCCGGAATTATGAAAAAGAAGTTGATGAAGCTAGAAGGTTGAAGTCTTCCCACACAAATGTTGAGTTACTTAAAGAAAAAATATTGGAGGAACAGGGGTGCAGGGAGAGAGCAGAAATGGAATTATCTAAGCTGCAGGAAATTGAAGCTAAAGCACAGAAGTTGGAGCTTGAATTAGCATCATGCACAGCATTGCTCAGCAACATACCTGATGTATCTTCTTTTGGTGATATACCTCAAAAGATCGCAGATTTGCAGAAGCAAGCATTGACAAATTTAAATAAAGTTGGTGAGGTAACATCACAGTTGAAAGAATTAAAGGTTGCATTGGAATTTGCTGATCTTAGCAAGCAACGGGCAGAAGGTGAAGCAACCCTTGCCAAAGAGAGGGCTGAAAGTGCTACTAGGGAGATCAAGCGGCTTGAACTTCTGCTTGCTGCCATCAGTGAAGAAAGGGATAGATTAAGAAAGGACCATGCTGTGTCGAAATCTAGGGATGGAGATGATGCATCATCCAAGAATATGGAATCGGATCTATCTCGAATGGAAAAGGTAGTAACAGAACTGGAGAGCACTATACGTGACCAGAGAGAACTAATTAGTCAACAGCACACTGAGCTCAATTTGATGAATGAAAAATTGAGCATTGAATCAAGAAAAGCAAAATCATTGGAGCGAGATGGAGATCAACTACGCTCACAGGTGGCTTTACTTGAGTCAAAGCTGGGCCATGGAGATTACTCTGCCTCTAGCACAAAAGTACTGCGTATGGTAAATACTCTTGCAGTGGACAATGAAGCAAAGCAGACTATAGAGGCATTGCAAGCTGAATTGAAGAAAACGAAAGAGAGGCTACAAGCAGTTGAAGAACTAAAAGGACAAGCTGATGTTGGAACTGTGGTTGATGTGAATATTGCTGAAAAGCTAGCACAGCTTAAAAATCAAATTGCAACCCTAGAGAAACGTGAAGAAAGATATAAGGCAGTATTTGCAGAGAGGATCTCAGTTTTCCGAAAGGCTTGCTGCTCGCTCTTTGGTTATAAGATAGTGATGAATGATCAGCAACAGTCAAATGGGATCCCTGTAACACGTTTTATTCTGCATTCTGTTTACGCCCAAAGTGATGATGAGAAGCTTGAGTTTGACTACGAATCTGGAAGCACCAATATTGTGGTCAATGACTACACTTCTCAACATGAAATTGCTCAGCAGGTAGATATTTTCATACGAAAGATGAATTCTATCCCGGCCTTCACAGCTAACCTGACAATGGAATCCTTCAACAAAAGAAGTATCTGTTGAAGATAAAAGTTCAGTGAGAATTCATATTGTTGGATTTTGTGAGTATGCTTTCTTCGAGTCACCGAAGATTGGAAAATGTATTTCATTTTGGAAACACTCTGGGCTCATGTCTTTCCGATGCATTATCACAGCTTCTCGTAGTAACTGGAGATGTCCAAATTGTTATGTTGTGGCAGCCCTGGACCGTGGTCGAGCAAGCTCCTAGATATAGCAAGGTTCCCCCCACCCTTTTTCATATATACTAAGGTGCAATTGATATACCTTGTGGTTTTTTATATGTTTTAACGATTTGTTCAAATGTCAAAAGCTGAGGAGCACGGCGTGTTACTAATTGGACATGAGTAGAGAGTTGATGCCGGGCTGTCACATACTCACATGGATTCACCTCTGTTATGATTTTTGACAAAGTATATATGAATGCGAGCGTTACTTGTACTGTGGCCTGGACTGAAGCATGAGCTTTTGTAAACTGTAGCGAACTATCATATGTAACTGAGCCATGTGAATTGTTAATTACCGCAAACCAGAAT]
[+] EMBL AA750939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTCTTTGGTTATAAGATAGTGATGAATGATCAGCAACAGTCAAATGGGATCCCTGTAACACGTTTTATTCTGCATTCGGTTTACCCCCAAAGTGATGATGAGAAGCTTGAGTTTGACTACGAATCTGGAAGCACCAATATTGTGGTCAATGACTACACTTCTCAACATGAAATTG TCAGCAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_452#0 CCCAATCTCCCTGCGGTAGAACCCTAGAGGAACCTTCTAGAACCCCCGAGCCCCCCCCCC CCCGCGGCCCCCGGCGAAGCCAGCGAGATGATTCTCCGGACTCCACCGCAGCGGAAGCGG CGGGCGGACTCCGACGTCGACGCCGCCGCCGCCACCGCCACCACCCGGAGCCCCGTTTCC GACCGCCGCCTCGTGCTCTACGACCGGCCCACCGCCCTCGTACCCGCTGGCGTCCCCGGG GAGCCCATGGATGACATGGTCTGCACGTACCACTGCCGTCAGATGGTGAAATCAGAATTT ATGGTGGCATTGGACACTGCAGAGAAGCAAGTTCAGGAGTATCGAGCCACACTTGATGAT ATGGAGGAACGATTATCCAAGAGTGAGGATGAGAGGGCAACATGCCAGGACAAACTGAAT TATGTCGAGCAAGAATTGGCAGCAACAAAAGGTCGGGAAAGTGCAATGCAAGAGCGATTA TTAAAGGAGGTGGGTGACTTTCAGGAACGCTACTGTGATCAAATCAAGAAGATAGGGGAA CTTGAGACGCAGCTGAAAAAAGAGATTGATTCTCGAATTGCTGCTGAATCATCGTCAGCA TCCGCAAAGGAGTCAGTCAAGGAGTTGGAGGGGAATTTGCAGCGTTTATCTGAAAATTCA GAAAGGGAGAAGAAAGCCCTTAAGAAGAAGCTTTCATACTTGCAAGACGACACAAAATTA TCCATTTCTAAACTAAATGCGGAGCTTGAAAGAATGAGACTCAGGGCGCTAAACTCTGAG GACGAAGCAAAGTTGCTGAATGAACAGTTGGAGGACTTAAAAAAGCAACTAGATGAGAGT GTTCGTGAAAATAATGAGATGGAGCACAGGCTATTGAATTGCAGTTCTTTATCTTATGAA CGTACTCCATCAGACGATCAGAAGTTGATAAAGCTTTTGCAAGAGGAGCTCCGGAATTAT GAAAAAGAAGTTGATGAAGCTAGAAGGTTGAAGTCTTCCCACACAAATGTTGAGTTACTT AAAGAAAAAATATTGGAGGAACAGGGGTGCAGGGAGAGAGCAGAAATGGAATTATCTAAG CTGCAGGAAATTGAAGCTAAAGCACAGAAGTTGGAGCTTGAATTAGCATCATGCACAGCA TTGCTCAGCAACATACCTGATGTATCTTCTTTTGGTGATATACCTCAAAAGATCGCAGAT TTGCAGAAGCAAGCATTGACAAATTTAAATAAAGTTGGTGAGGTAACATCACAGTTGAAA GAATTAAAGGTTGCATTGGAATTTGCTGATCTTAGCAAGCAACGGGCAGAAGGTGAAGCA ACCCTTGCCAAAGAGAGGGCTGAAAGTGCTACTAGGGAGATCAAGCGGCTTGAACTTCTG CTTGCTGCCATCAGTGAAGAAAGGGATAGATTAAGAAAGGACCATGCTGTGTCGAAATCT AGGGATGGAGATGATGCATCATCCAAGAATATGGAATCGGATCTATCTCGAATGGAAAAG GTAGTAACAGAACTGGAGAGCACTATACGTGACCAGAGAGAACTAATTAGTCAACAGCAC ACTGAGCTCAATTTGATGAATGAAAAATTGAGCATTGAATCAAGAAAAGCAAAATCATTG GAGCGAGATGGAGATCAACTACGCTCACAGGTGGCTTTACTTGAGTCAAAGCTGGGCCAT GGAGATTACTCTGCCTCTAGCACAAAAGTACTGCGTATGGTAAATACTCTTGCAGTGGAC AATGAAGCAAAGCAGACTATAGAGGCATTGCAAGCTGAATTGAAGAAAACGAAAGAGAGG CTACAAGCAGTTGAAGAACTAAAAGGACAAGCTGATGTTGGAACTGTGGTTGATGTGAAT ATTGCTGAAAAGCTAGCACAGCTTAAAAATCAAATTGCAACCCTAGAGAAACGTGAAGAA AGATATAAGGCAGTATTTGCAGAGAGGATCTCAGTTTTCCGAAAGGCTTGCTGCTCGCTC TTTGGTTATAAGATAGTGATGAATGATCAGCAACAGTCAAATGGGATCCCTGTAACACGT TTTATTCTGCATTCTGTTTACGCCCAAAGTGATGATGAGAAGCTTGAGTTTGACTACGAA TCTGGAAGCACCAATATTGTGGTCAATGACTACACTTCTCAACATGAAATTGCTCAGCAG GTAGATATTTTCATACGAAAGATGAATTCTATCCCGGCCTTCACAGCTAACCTGACAATG GAATCCTTCAACAAAAGAAGTATCTGTTGAAGATAAAAGTTCAGTGAGAATTCATATTGT TGGATTTTGTGAGTATGCTTTCTTCGAGTCACCGAAGATTGGAAAATGTATTTCATTTTG GAAACACTCTGGGCTCATGTCTTTCCGATGCATTATCACAGCTTCTCGTAGTAACTGGAG ATGTCCAAATTGTTATGTTGTGGCAGCCCTGGACCGTGGTCGAGCAAGCTCCTAGATATA GCAAGGTTCCCCCCACCCTTTTTCATATATACTAAGGTGCAATTGATATACCTTGTGGTT TTTTATATGTTTTAACGATTTGTTCAAATGTCAAAAGCTGAGGAGCACGGCGTGTTACTA ATTGGACATGAGTAGAGAGTTGATGCCGGGCTGTCACATACTCACATGGATTCACCTCTG TTATGATTTTTGACAAAGTATATATGAATGCGAGCGTTACTTGTACTGTGGCCTGGACTG AAGCATGAGCTTTTGTAAACTGTAGCGAACTATCATATGTAACTGAGCCATGTGAATTGT TAATTACCGCAAACCAGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)