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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4542 cluster # 4542       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4542#0 length = 621 sequences # 3  

consensusID : consensus_4542#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 621
fasta sequence
                              [TTGCGCGCATTCGGAGCGCAGGAACCGTAGGGGAATGTATATCTTGTACAAGGATGTTCAGTCCTGCCAGGATGAGGATGTTCATGTCCTGTGGTCGATCCTCATCGACTCGCACCGTCATCCGGCTCTCATGAAGCTGAAGCTCTGAAGTTTGAGGCCATGGCATGAGCAGCAAAACTTCAGAACTACTTTGTGTAGAGACT-AAGGNAA-GGTTTTCCTGAGAAGTCA-TTCTAGGGTGTGGTTTTTGGCTTTGATGATGATGATCCTCATTGGCCATTGTCCTTGCATT-CATGCACTCC-AAAAAAGAAATGAGAGAAAAAAAATATCGAGGTTTGTTTATCTTCTTTCTCGGTGTCCGATTCGCATCCTGTATTAGTGAATGTGAAATTCGGTCGTGTGCATCCTTAGTTGGTGCGGAGGCTAGGAGTTTCGCTTCCATCGTCGAAAAAAAAAGAAAAAAAAACACCCAGTGTGGGTGAAATGTTGTTACCTGTGAGTGTCATGTGTTGAGGTTGATAAAGAGTGTGAGGCTGAGCTCATTTGTACATACATACATACTTGAATACTTGCTCAAATGCCTTACCCTTGATTGTGGTATTGGAGATAGGTTGGTAGAGTGTA]

[+] EMBL AU174551             [TTGCGCGCATTCGGAGCGCAGGAACCGTAGGGGAATGTATATCTTGTACAAGGATGTTCAGTCCTGCCAGGATGAGGATGTTCATGTCCTGTGGTCGATCCTCATCGACTCGCACCGTCATCCGGCTCTCATGAAGCTGAAGCTCTGAAGTTTGAGGCCATGGCATGAGCAGCAAAACTTCAGAACTACTTTGTGTAGAGACT AAGGGAAGGGTTTTCCTGAGAAGTCA TTCTAGGGTGTGGTTTTTGGCTTTGATGATGATGATCCTCATTGGCCATTGTCCTTGCATT CATGCACTCC AAAAAAGAAATGAGAGAAAAAAAATATCGAGGTTTGTTTATCTTCTTTCTCGGTGTCCGATTCGCATCCTGTATTAGTGAATGTGAAATTCGGTCGTGTGCATCCTTAGTTGGTGCGGAGGCTAGGAGTTTCGCTTCCATCGTCGAAAAAAAAAGA                                                                                                                                                                      ]
[-] EMBL CF325557             [TTGCGCGCATTCGGAGCGCAGGAACCGTAGGGGAATGTATATCTTGTACAAGGATGTTCAGTCCTGCCAGGATGAGGATGTTCATGTCCTGTGGTCGATCCTCATCGACTCGCACCGTCATCCGGCTCTCATGAAGCTGAAGCTCTGAAGTTTGAGGCCATGGCATGAGCAGCAAAACTTCAGAAATACTTTGTGTAGAGAATNCAGGNCA GGTTTTCCTGAGAAGTCA TTCTAGGGTGTGGTTTTTGGCTTTGATGATGATGATCCTCATTGGCCATTGTCCTTGCATT CA                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU174550             [                                                                                                                                                                                       gnccnCTTTGTG AAAG CT AAGGNAA GGNTNNCCTGAGAAG CANTCCTAGGGTGTGGTTTTTGCCTTTGATGATGATGACCCTCATTGGCCATTGCCCTTGCATTNCATGCACTCCAAAAAAAGAAATGAGAGAAAAAAAATATCGAGGTTTGTTTATCTNCTTTCTCGGTGTCCGATTCGCATCCTGTATTAGTGAATGTGAAANTCGGTCGTGTGCATCCTTAGTTGGTGCGGAGGCTAGGAGTTTCGCTTCCATCGTCGAAAAAAAAAGAAAAAAAAACACCCAGTGTGGGTGAAATGTTGTTACCTGTGAGTGTCATGTGTTGAGGTTGATAAAGAGTGTGAGGCTGAGCTCATTTGTACATACATACATACTTGAATACTTGCTCAAATGCCTTACCCTTGATTGTGGTATTGGAGATAGGTTGGTAGAGTGTA]


>consensus_4542#0 TTGCGCGCATTCGGAGCGCAGGAACCGTAGGGGAATGTATATCTTGTACAAGGATGTTCA GTCCTGCCAGGATGAGGATGTTCATGTCCTGTGGTCGATCCTCATCGACTCGCACCGTCA TCCGGCTCTCATGAAGCTGAAGCTCTGAAGTTTGAGGCCATGGCATGAGCAGCAAAACTT CAGAACTACTTTGTGTAGAGACTAAGGNAAGGTTTTCCTGAGAAGTCATTCTAGGGTGTG GTTTTTGGCTTTGATGATGATGATCCTCATTGGCCATTGTCCTTGCATTCATGCACTCCA AAAAAGAAATGAGAGAAAAAAAATATCGAGGTTTGTTTATCTTCTTTCTCGGTGTCCGAT TCGCATCCTGTATTAGTGAATGTGAAATTCGGTCGTGTGCATCCTTAGTTGGTGCGGAGG CTAGGAGTTTCGCTTCCATCGTCGAAAAAAAAAGAAAAAAAAACACCCAGTGTGGGTGAA ATGTTGTTACCTGTGAGTGTCATGTGTTGAGGTTGATAAAGAGTGTGAGGCTGAGCTCAT TTGTACATACATACATACTTGAATACTTGCTCAAATGCCTTACCCTTGATTGTGGTATTG GAGATAGGTTGGTAGAGTGTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)