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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4559 cluster # 4559       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4559#0 length = 595 sequences # 3  

consensusID : consensus_4559#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 595
fasta sequence
                              [GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAGGCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTCTAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGTGGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTACTCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAGCGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCGCAAGGCGTCTCGGAGAA-TCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTTCTTTTC-TTGCCTCTAGGGACTGTATTTTTTTTA--CTCTATATCCAA-GGAATAGCACAATCTCGTGCTGATTCTTTTCNNNANNANANNNANNNANANAAAAAAAAAAAAAAAAACT]

[+] EMBL CA754853             [GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAGGCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTCTAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGTGGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTACTCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAGCGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCGCAAGGCGTCTCGGAGAA TCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTTCTTTTC TTGCCTCTAGGGACTGTATTTTTTTTA  CTCTATATCCAA GGAATAGCACAATCTCGTGCTGATTCTTTTCNNNANNANANNNANNNANANAAAAAAAAAAAAAAAAACT]
[+] EMBL CA754799             [GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAGGCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTCTAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAG                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C91607               [                                                                                                                                                    ccgGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGTGGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTACTCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAGCGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCGCAAGGCGTCTCGGAGAATTCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTTCTTTTCTTTGCCTCTAGGGACTGTATTTTTTTTANCCTCTATATCCAATGAAATAGCACAATCTNGTGCTt                                                ]


>consensus_4559#0 GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAG GCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTC TAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGG TGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGT GGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTAC TCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAG CGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCG CAAGGCGTCTCGGAGAATCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTT CTTTTCTTGCCTCTAGGGACTGTATTTTTTTTACTCTATATCCAAGGAATAGCACAATCT CGTGCTGATTCTTTTCNNNANNANANNNANNNANANAAAAAAAAAAAAAAAAACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)