These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4559#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 595 fasta sequence [GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAGGCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTCTAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGTGGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTACTCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAGCGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCGCAAGGCGTCTCGGAGAA-TCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTTCTTTTC-TTGCCTCTAGGGACTGTATTTTTTTTA--CTCTATATCCAA-GGAATAGCACAATCTCGTGCTGATTCTTTTCNNNANNANANNNANNNANANAAAAAAAAAAAAAAAAACT] [+] EMBL CA754853 [GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAGGCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTCTAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGTGGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTACTCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAGCGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCGCAAGGCGTCTCGGAGAA TCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTTCTTTTC TTGCCTCTAGGGACTGTATTTTTTTTA CTCTATATCCAA GGAATAGCACAATCTCGTGCTGATTCTTTTCNNNANNANANNNANNNANANAAAAAAAAAAAAAAAAACT] [+] EMBL CA754799 [GATCGGGGAGGGAACCAGAGCGCCGCCGCCTTTCGTCCGGTGGGGATTCTCGTCTCGCAGGCAGGGCGCTGTACAACCCCAACGCCGAGACAGAGGAAAAGGCTTGAGGGAGACCTTTTCTAATCCTGCTCCTCTCGGCCAGATACACCAAGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAG ] [+] EMBL C91607 [ ccgGAGGATCTGGCGCCTAACGGCTAGCTGGGTGGCCTATCAGTAATTGGACCCAACTCATTGGGAGCCATACCAAAGTGTCCAAGAATGGTGGGAAATGCTGACTAACATAAATGAAGTGCCCAAGAAAGGATTGAGATCCTTAATCCTACTCATCATGTGGGAAATCTGGAAGGAAAGGAACCAGCGGATCTTTGAGCATAAGGAAACAGCGGCCCCCAATCTTATAGCGAAGATAAAGGAAGAGGCAAGAACCTGGATCATAGCAGGCGCAAGGCGTCTCGGAGAATTCCTCCCATCTTAGTCATAGTCTCTGTTTTCATGTACAATTTTCTTTTCTTTGCCTCTAGGGACTGTATTTTTTTTANCCTCTATATCCAATGAAATAGCACAATCTNGTGCTt ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||