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Oryza sativa
cluster # 4560 cluster # 4560       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4560#0 length = 1575 sequences # 1  
consensus_4560#1 length = 1477 sequences # 1  
consensus_4560#2 length = 188 sequences # 1  

consensusID : consensus_4560#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1575
fasta sequence
                              [CACGTCTTCACACACCTGGTGCCACTGCCCATGGCGACGCCGACGGAGACGCGACGCCGACGGAGACGCGCCGCCGCGGTCGGCGAGGGGGCAAGCTTAACAAGGCGCGGAGGAAGCCGCCGGTCGACCCACCCAAGGTCGTCGACGGCGGGACGACGACGACGACCGTGGACGACGTCCCCGACCACCTCCTCCAGGACATCCTCCTCTGCCTCGGCTCCTCCGCCTGCCTCGTCCGCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTTGTCACCGCCGCCGGCTTCCTCGACGCCTTCCGCTCACTCCACGGCGCGACCCACCACGTCGCCGGGCACTACCACACCGTCGACGACGCGTACGACAGGCAGGCGGCGCCGGGGGCATTCCCTGATGGTGGCAGGAGCTTCGTCTTCGTCCCCTCCGACGAGCTCGCCGACACCGATCGCCGCCGGTTCTCCTCCCTCGATTTCCTCCCGGACTGCGAGAGCGGCTACTCCTGGGAGCTCGCCGACTCCCGCGGCGGCCTTCTCCTCCTCACCAAGATGAAGCAACGCACCGGCGACGGCTCACCGGCGCGGCGCCACTGCTTCACCTTCCCCGACATCGTCGTCTGCGAGCCCCTGACGCGGTGCCACCAGGGTATCCTCTGTCCTCCCGACCTCAGCGGTTACCAGTGCCTCGGCGTCTTCCTCCTCGACGGCGACGGCGACGGCGGCCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACCTGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCGGCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGGTGGCGACGTCACACTAGAGCATGTAAGGCTCGACGCCACGAGCTTCGTGGGGCGTGCAAATGGCCGCGTCTACTGGGAAATCGAGGGCGACGAAGGCGGCGACATGCTCGTCCTCGACGAGACCACCGCGGGATTCTCCCTCGTGACGTTCCCGGAGAACGTCCGCGAGAGCTACGACAAGCGGACGTTCCGGATCATCGCCGGCGGCGACGGCGTCGCCATGCGCGTGGTCCGTGTGATAAACAACGACCTCAAGGTGTTCGCGCAGCTCGACGGCGACGGCGAGTGGGTGCTCGAGAAGCGGGTTTGGTTGCCGGCGGCGGCACGGGGCCTGCCAGGGTACGACGAGGGGTACTTCCAGGAGCAGAACGGAGAAGCCATCGTTGTCGCGGCGAGCGCGGCGTATGTGCTGCTGACGCCGCCGGTGGAGGACACTTGGCTCTTCTCCGTCGAGCTGGAGACGATGGCGGTGGAGCGGTGGCATGAGAGGAACAAGTATGCCGGGGTGGCTTACCCCTGCGAGTTGCCATGGCCGCGGGCTTTGCAGGCTACGGATGCTGATCAGATTAGTGGGAGGAGACGATGCTGATGAGATGTGGATTGATTCTGGCTGGTCCAAAACTGTTTCGACAGTTGCATGCATTCACTTTGCGTTGCATGATGTTTCAAGCGCAATAATATTGCTGGCGGAATATTGATGC]

[+] EMBL AK073913             [CACGTCTTCACACACCTGGTGCCACTGCCCATGGCGACGCCGACGGAGACGCGACGCCGACGGAGACGCGCCGCCGCGGTCGGCGAGGGGGCAAGCTTAACAAGGCGCGGAGGAAGCCGCCGGTCGACCCACCCAAGGTCGTCGACGGCGGGACGACGACGACGACCGTGGACGACGTCCCCGACCACCTCCTCCAGGACATCCTCCTCTGCCTCGGCTCCTCCGCCTGCCTCGTCCGCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTTGTCACCGCCGCCGGCTTCCTCGACGCCTTCCGCTCACTCCACGGCGCGACCCACCACGTCGCCGGGCACTACCACACCGTCGACGACGCGTACGACAGGCAGGCGGCGCCGGGGGCATTCCCTGATGGTGGCAGGAGCTTCGTCTTCGTCCCCTCCGACGAGCTCGCCGACACCGATCGCCGCCGGTTCTCCTCCCTCGATTTCCTCCCGGACTGCGAGAGCGGCTACTCCTGGGAGCTCGCCGACTCCCGCGGCGGCCTTCTCCTCCTCACCAAGATGAAGCAACGCACCGGCGACGGCTCACCGGCGCGGCGCCACTGCTTCACCTTCCCCGACATCGTCGTCTGCGAGCCCCTGACGCGGTGCCACCAGGGTATCCTCTGTCCTCCCGACCTCAGCGGTTACCAGTGCCTCGGCGTCTTCCTCCTCGACGGCGACGGCGACGGCGGCCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACCTGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCGGCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGGTGGCGACGTCACACTAGAGCATGTAAGGCTCGACGCCACGAGCTTCGTGGGGCGTGCAAATGGCCGCGTCTACTGGGAAATCGAGGGCGACGAAGGCGGCGACATGCTCGTCCTCGACGAGACCACCGCGGGATTCTCCCTCGTGACGTTCCCGGAGAACGTCCGCGAGAGCTACGACAAGCGGACGTTCCGGATCATCGCCGGCGGCGACGGCGTCGCCATGCGCGTGGTCCGTGTGATAAACAACGACCTCAAGGTGTTCGCGCAGCTCGACGGCGACGGCGAGTGGGTGCTCGAGAAGCGGGTTTGGTTGCCGGCGGCGGCACGGGGCCTGCCAGGGTACGACGAGGGGTACTTCCAGGAGCAGAACGGAGAAGCCATCGTTGTCGCGGCGAGCGCGGCGTATGTGCTGCTGACGCCGCCGGTGGAGGACACTTGGCTCTTCTCCGTCGAGCTGGAGACGATGGCGGTGGAGCGGTGGCATGAGAGGAACAAGTATGCCGGGGTGGCTTACCCCTGCGAGTTGCCATGGCCGCGGGCTTTGCAGGCTACGGATGCTGATCAGATTAGTGGGAGGAGACGATGCTGATGAGATGTGGATTGATTCTGGCTGGTCCAAAACTGTTTCGACAGTTGCATGCATTCACTTTGCGTTGCATGATGTTTCAAGCGCAATAATATTGCTGGCGGAATATTGATGC]


>consensus_4560#0 CACGTCTTCACACACCTGGTGCCACTGCCCATGGCGACGCCGACGGAGACGCGACGCCGA CGGAGACGCGCCGCCGCGGTCGGCGAGGGGGCAAGCTTAACAAGGCGCGGAGGAAGCCGC CGGTCGACCCACCCAAGGTCGTCGACGGCGGGACGACGACGACGACCGTGGACGACGTCC CCGACCACCTCCTCCAGGACATCCTCCTCTGCCTCGGCTCCTCCGCCTGCCTCGTCCGCG CGGCGTACGCGTGCAAGCGGTGGCGCCGCGTTGTCACCGCCGCCGGCTTCCTCGACGCCT TCCGCTCACTCCACGGCGCGACCCACCACGTCGCCGGGCACTACCACACCGTCGACGACG CGTACGACAGGCAGGCGGCGCCGGGGGCATTCCCTGATGGTGGCAGGAGCTTCGTCTTCG TCCCCTCCGACGAGCTCGCCGACACCGATCGCCGCCGGTTCTCCTCCCTCGATTTCCTCC CGGACTGCGAGAGCGGCTACTCCTGGGAGCTCGCCGACTCCCGCGGCGGCCTTCTCCTCC TCACCAAGATGAAGCAACGCACCGGCGACGGCTCACCGGCGCGGCGCCACTGCTTCACCT TCCCCGACATCGTCGTCTGCGAGCCCCTGACGCGGTGCCACCAGGGTATCCTCTGTCCTC CCGACCTCAGCGGTTACCAGTGCCTCGGCGTCTTCCTCCTCGACGGCGACGGCGACGGCG GCCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACCTGCTGA ACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCGGCGGCG GCGGCTGGCGCCTACCGCACAGCACAGCCGCCGGTGGCGACGTCACACTAGAGCATGTAA GGCTCGACGCCACGAGCTTCGTGGGGCGTGCAAATGGCCGCGTCTACTGGGAAATCGAGG GCGACGAAGGCGGCGACATGCTCGTCCTCGACGAGACCACCGCGGGATTCTCCCTCGTGA CGTTCCCGGAGAACGTCCGCGAGAGCTACGACAAGCGGACGTTCCGGATCATCGCCGGCG GCGACGGCGTCGCCATGCGCGTGGTCCGTGTGATAAACAACGACCTCAAGGTGTTCGCGC AGCTCGACGGCGACGGCGAGTGGGTGCTCGAGAAGCGGGTTTGGTTGCCGGCGGCGGCAC GGGGCCTGCCAGGGTACGACGAGGGGTACTTCCAGGAGCAGAACGGAGAAGCCATCGTTG TCGCGGCGAGCGCGGCGTATGTGCTGCTGACGCCGCCGGTGGAGGACACTTGGCTCTTCT CCGTCGAGCTGGAGACGATGGCGGTGGAGCGGTGGCATGAGAGGAACAAGTATGCCGGGG TGGCTTACCCCTGCGAGTTGCCATGGCCGCGGGCTTTGCAGGCTACGGATGCTGATCAGA TTAGTGGGAGGAGACGATGCTGATGAGATGTGGATTGATTCTGGCTGGTCCAAAACTGTT TCGACAGTTGCATGCATTCACTTTGCGTTGCATGATGTTTCAAGCGCAATAATATTGCTG GCGGAATATTGATGC



consensusID : consensus_4560#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1477
fasta sequence
                              [CCGTTAATTTCACACACCGGCTGATTCGATTCTTTCCCATGGCGCGCCGCGGCGGCCGGCGCGCGGACAAGGCTAGTAACTGCGGCAGCGCGCCGAGGAAGGCGAAGGCCGTCCCCGCCGCGGCGACGTCCGTGGACGACGTCCCCGACCACCTCCTCGAGGACATCCTCCTCCGCCTCGGCCCCTCCTCCGCCTGCCTCGTCCGCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTCGTCACTGCCGCGGGCTTCCTCGACGCCTTCCGCGCGCTCCACGGCGCGCACCACCACCGCGTCGCCGGGTACTACCACACCGTCGACGCCTACTACGCGCCGGCGCTGCCCGGCGGCGAGAGCTCCGTCTTCGTCCCGTCCTCGTCATCGCTCGCCGGCGTCGACGGCCGCCTGTGGTTCTCGCTAGATTTTCTCCCGGCGAGCGACGACTTCTCCTGGGAGCTCGCCGACAGCCGCGGCGGCCTACTGCTCCTCTCCAAGAAGAGGAGGACACACACACGCAGCGGCTATGCAGCAGAAGGCGACTTCTTCTTCACTGACCTCATCGTCTGCGAGCCCCTGACGCGGCGCTACCAGGGTATCCTTTGTCCGGCCGACTTCACTGGATATCGATGCATCGGCGTCTTCTTGCTCGACGGCGGCGATGACGGCGGCGGTGACATCAGCCTGTCCAACTTCAGGGTCCTCTGCGCGCTCTACGATCTCTACTGGTTAAACAATCGGCACATTGGCGTGCAATCCGCCTGCGTGTTCTCGTCAGGCAGACATGGCGGCGGGTGGCGGCTACCGAAGAGCGCCGTCGCGGATGACATCCAGCTCACAGCAAGGTTCAACGCCATGAGCTTCGTGGGGCGCGCCGGTGGCTGCTTCTACTGGGGAATCGACGACGACGACGACGAAGACGACGGCGCCATGCTCGTCCTCGACGAGACCACCACGGAGTTCTCGCTGGTGACGTTCCCGGACATCATCCGGGAGAACTACCACATGACGACGTTCCGGATCATCGCCGGCGGCGACGGCGCCATGCGTGTTCTCCGCGTGATAGGCAACGACCTCAAGGTGTTCACGCAGCTGGCGGGTAGCGGCGTTGAGTGGGTGCTGGAGAAGCTGGTGCGGTTGCCGGAGGCGACGCGGGGATTGCCGGGGCACGAGGAGAGGTACTTCGAGCAGAACGAAGCCATGATCGTCGCGGCGGACGCGGCGTACGTGCTCCTGACGCCGTCGGTGGAGAAGACGTGGCTCTTCTCCGTCGAGCTGGAGACGATGACGGTGGAGCGCCACCATGAGAGGAACAAGTACGCGGGGGTGGCTTACCCGTACGAGTTGCCTTTGCTGCGGGCTTTGCACGCGGGCGGCAGATATCGATGAGAACAACGACTTGGCAACTTGGCGTTGGACGATGATATGGAATGACATTGTTTGGTTTGATATCAACTGTTCGTGCACGATCGATT]

[+] EMBL AK111440             [CCGTTAATTTCACACACCGGCTGATTCGATTCTTTCCCATGGCGCGCCGCGGCGGCCGGCGCGCGGACAAGGCTAGTAACTGCGGCAGCGCGCCGAGGAAGGCGAAGGCCGTCCCCGCCGCGGCGACGTCCGTGGACGACGTCCCCGACCACCTCCTCGAGGACATCCTCCTCCGCCTCGGCCCCTCCTCCGCCTGCCTCGTCCGCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTCGTCACTGCCGCGGGCTTCCTCGACGCCTTCCGCGCGCTCCACGGCGCGCACCACCACCGCGTCGCCGGGTACTACCACACCGTCGACGCCTACTACGCGCCGGCGCTGCCCGGCGGCGAGAGCTCCGTCTTCGTCCCGTCCTCGTCATCGCTCGCCGGCGTCGACGGCCGCCTGTGGTTCTCGCTAGATTTTCTCCCGGCGAGCGACGACTTCTCCTGGGAGCTCGCCGACAGCCGCGGCGGCCTACTGCTCCTCTCCAAGAAGAGGAGGACACACACACGCAGCGGCTATGCAGCAGAAGGCGACTTCTTCTTCACTGACCTCATCGTCTGCGAGCCCCTGACGCGGCGCTACCAGGGTATCCTTTGTCCGGCCGACTTCACTGGATATCGATGCATCGGCGTCTTCTTGCTCGACGGCGGCGATGACGGCGGCGGTGACATCAGCCTGTCCAACTTCAGGGTCCTCTGCGCGCTCTACGATCTCTACTGGTTAAACAATCGGCACATTGGCGTGCAATCCGCCTGCGTGTTCTCGTCAGGCAGACATGGCGGCGGGTGGCGGCTACCGAAGAGCGCCGTCGCGGATGACATCCAGCTCACAGCAAGGTTCAACGCCATGAGCTTCGTGGGGCGCGCCGGTGGCTGCTTCTACTGGGGAATCGACGACGACGACGACGAAGACGACGGCGCCATGCTCGTCCTCGACGAGACCACCACGGAGTTCTCGCTGGTGACGTTCCCGGACATCATCCGGGAGAACTACCACATGACGACGTTCCGGATCATCGCCGGCGGCGACGGCGCCATGCGTGTTCTCCGCGTGATAGGCAACGACCTCAAGGTGTTCACGCAGCTGGCGGGTAGCGGCGTTGAGTGGGTGCTGGAGAAGCTGGTGCGGTTGCCGGAGGCGACGCGGGGATTGCCGGGGCACGAGGAGAGGTACTTCGAGCAGAACGAAGCCATGATCGTCGCGGCGGACGCGGCGTACGTGCTCCTGACGCCGTCGGTGGAGAAGACGTGGCTCTTCTCCGTCGAGCTGGAGACGATGACGGTGGAGCGCCACCATGAGAGGAACAAGTACGCGGGGGTGGCTTACCCGTACGAGTTGCCTTTGCTGCGGGCTTTGCACGCGGGCGGCAGATATCGATGAGAACAACGACTTGGCAACTTGGCGTTGGACGATGATATGGAATGACATTGTTTGGTTTGATATCAACTGTTCGTGCACGATCGATT]


>consensus_4560#1 CCGTTAATTTCACACACCGGCTGATTCGATTCTTTCCCATGGCGCGCCGCGGCGGCCGGC GCGCGGACAAGGCTAGTAACTGCGGCAGCGCGCCGAGGAAGGCGAAGGCCGTCCCCGCCG CGGCGACGTCCGTGGACGACGTCCCCGACCACCTCCTCGAGGACATCCTCCTCCGCCTCG GCCCCTCCTCCGCCTGCCTCGTCCGCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTCG TCACTGCCGCGGGCTTCCTCGACGCCTTCCGCGCGCTCCACGGCGCGCACCACCACCGCG TCGCCGGGTACTACCACACCGTCGACGCCTACTACGCGCCGGCGCTGCCCGGCGGCGAGA GCTCCGTCTTCGTCCCGTCCTCGTCATCGCTCGCCGGCGTCGACGGCCGCCTGTGGTTCT CGCTAGATTTTCTCCCGGCGAGCGACGACTTCTCCTGGGAGCTCGCCGACAGCCGCGGCG GCCTACTGCTCCTCTCCAAGAAGAGGAGGACACACACACGCAGCGGCTATGCAGCAGAAG GCGACTTCTTCTTCACTGACCTCATCGTCTGCGAGCCCCTGACGCGGCGCTACCAGGGTA TCCTTTGTCCGGCCGACTTCACTGGATATCGATGCATCGGCGTCTTCTTGCTCGACGGCG GCGATGACGGCGGCGGTGACATCAGCCTGTCCAACTTCAGGGTCCTCTGCGCGCTCTACG ATCTCTACTGGTTAAACAATCGGCACATTGGCGTGCAATCCGCCTGCGTGTTCTCGTCAG GCAGACATGGCGGCGGGTGGCGGCTACCGAAGAGCGCCGTCGCGGATGACATCCAGCTCA CAGCAAGGTTCAACGCCATGAGCTTCGTGGGGCGCGCCGGTGGCTGCTTCTACTGGGGAA TCGACGACGACGACGACGAAGACGACGGCGCCATGCTCGTCCTCGACGAGACCACCACGG AGTTCTCGCTGGTGACGTTCCCGGACATCATCCGGGAGAACTACCACATGACGACGTTCC GGATCATCGCCGGCGGCGACGGCGCCATGCGTGTTCTCCGCGTGATAGGCAACGACCTCA AGGTGTTCACGCAGCTGGCGGGTAGCGGCGTTGAGTGGGTGCTGGAGAAGCTGGTGCGGT TGCCGGAGGCGACGCGGGGATTGCCGGGGCACGAGGAGAGGTACTTCGAGCAGAACGAAG CCATGATCGTCGCGGCGGACGCGGCGTACGTGCTCCTGACGCCGTCGGTGGAGAAGACGT GGCTCTTCTCCGTCGAGCTGGAGACGATGACGGTGGAGCGCCACCATGAGAGGAACAAGT ACGCGGGGGTGGCTTACCCGTACGAGTTGCCTTTGCTGCGGGCTTTGCACGCGGGCGGCA GATATCGATGAGAACAACGACTTGGCAACTTGGCGTTGGACGATGATATGGAATGACATT GTTTGGTTTGATATCAACTGTTCGTGCACGATCGATT



consensusID : consensus_4560#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 188
fasta sequence
                              [GGAATAGCTTGCGGCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACCTGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCGGCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGNGTGGCGACGTCACACNTAGAGC]

[+] EMBL CB967467             [GGAATAGCTTGCGGCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACCTGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCGGCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGNGTGGCGACGTCACACNTAGAGC]


>consensus_4560#2 GGAATAGCTTGCGGCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATC GTTACCTGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCG GCAGCGGCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGNGTGGCGACGTCACA CNTAGAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4560#0      CACGTCTTCACACACCTGGTGCCACTGCCCATGGCGACGCCGACGGAGACGCGACGCCGA 60
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      ------------------------------------CCGTTAATTTCACACACCGGCTGA 24
                                                                                  

consensus_4560#0      CGGAGACGCGCCGCCGCGGTCGGCGAGGGGGCAAGCTTAACAAGGCGCGGAGGAAGCCGC 120
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TTCGATTCTTTCCCATGGCGCGCCGCGGCGGCCGGCGCGCGGACAAGGCTAGTAACTGCG 84
                                                                                  

consensus_4560#0      CGGTCGACCCACCCAAGGTCGTCGACGGCGGGACGACGACGACGACCGTGGACGACGTCC 180
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      GCAGCGCGCCGAGGAAGGCGAAGGCCGTCCCCGCCGCGGCGACGTCCGTGGACGACGTCC 144
                                                                                  

consensus_4560#0      CCGACCACCTCCTCCAGGACATCCTCCTCTGCCTCGGC---TCCTCCGCCTGCCTCGTCC 237
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      CCGACCACCTCCTCGAGGACATCCTCCTCCGCCTCGGCCCCTCCTCCGCCTGCCTCGTCC 204
                                                                                  

consensus_4560#0      GCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTTGTCACCGCCGCCGGCTTCCTCGACG 297
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      GCGCGGCGTACGCGTGCAAGCGGTGGCGCCGCGTCGTCACTGCCGCGGGCTTCCTCGACG 264
                                                                                  

consensus_4560#0      CCTTCCGCTCACTCCACGGCGCGACCCACCACGTCGCCGGGCACTACCACACCGTCGACG 357
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      CCTTCCGCGCGCTCCACGGCGCGCACCACCACCGCGTCGCCGGGTACTACCACACCGTCG 324
                                                                                  

consensus_4560#0      ACGCGTACGACAGGCAGGCGGCGCCGGGGGCATTCCCTGATGGTGGCAGGAGCTTCGTCT 417
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      ACGCCTACTACGCGCCGGCGCTGCCCGG------------CGGCGAGAGCTCCGTCTTCG 372
                                                                                  

consensus_4560#0      TCGTCCCCTCCGACGAGCTCGCCGACACCGATCGCCGCCGGTTCTCCTCCCTCGATTTCC 477
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TCCCGTCCTCGTCATCGCTCGCCGGCGTCGACGGCCGCCTGTGGTTCTCGCTAGATTTTC 432
                                                                                  

consensus_4560#0      TCCCGGACTGCGAGAGCGGCTACTCCTGGGAGCTCGCCGACTCCCGCGGCGGCCTTCTCC 537
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TCCCGGCGAGCGA---CGACTTCTCCTGGGAGCTCGCCGACAGCCGCGGCGGCCTACTGC 489
                                                                                  

consensus_4560#0      TCCTCACCAAGATGAAGCAACGCACCGGCGACGGCTCACCGGCGCGGCGCCACTGCTTCA 597
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TCCTCTCCAAGAAGAGGAGGACACACACACGCAGCGGCTATGCAGCAGAAGGCGACTTCT 549
                                                                                  

consensus_4560#0      CCTTCCCCGACATCGTCGTCTGCGAGCCCCTGACGCGGTGCCACCAGGGTATCCTCTGTC 657
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TCTTCACTGACCTCATCGTCTGCGAGCCCCTGACGCGGCGCTACCAGGGTATCCTTTGTC 609
                                                                                  

consensus_4560#0      CTCCCGACCTCAGCGGTTACCAGTGCCTCGGCGTCTTCCTCCTCGACGGCG---ACGGCG 714
consensus_4560#2      ------------------------------------------------GGA---ATAGC- 8
consensus_4560#1      CGGCCGACTTCACTGGATATCGATGCATCGGCGTCTTCTTGCTCGACGGCGGCGATGACG 669
                                                                      *     *   * 

consensus_4560#0      ACGGCGGCCGCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACC 774
consensus_4560#2      -TTGCGGC-GCATCGGCATGTCCAACTTCAAGGTCATCTGCGCACTCTACGATCGTTACC 66
consensus_4560#1      GCGGCGGTGACATCAGCCTGTCCAACTTCAGGGTCCTCTGCGCGCTCTACGATCTCTACT 729
                         ****   **** ** ************ **** ******* **********  *** 

consensus_4560#0      TGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCG 834
consensus_4560#2      TGCTGAACTATATTCTCCCTCTCAGCGAGACATTGGCCTGCACGTTCACCTCCGGCAGCG 126
consensus_4560#1      GGTTAAACAAT---CGGCACATTGGCGTGCAATCCGCCTGCGTGTTCTCGTCAGGCAGAC 786
                       * * *** **   *  *   *  *** *  **  ******  **** * ** *****  

consensus_4560#0      GCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGG---TGGCGACGTCACACT-A 890
consensus_4560#2      GCGGCGGCGGCTGGCGCCTACCGCACAGCACAGCCGCCGNG--TGGCGACGTCACACNTA 184
consensus_4560#1      ATGGCGGCGGGTGGCGGCTACCGAAGAGCGCCGTCGCGGATGACATCCAGCTCACAGC-A 845
                        ******** ***** ****** * *** * * *** *       * *  *****   *

consensus_4560#0      GAGCATGTAAGGCTCGACGCCACGAGCTTCGTGGGGCGTGCAAATGGCCGCGTCTACTGG 950
consensus_4560#2      GAGC-------------------------------------------------------- 188
consensus_4560#1      AGGTTCAACGCCATGAGCTTCGTGGGGCGCGCCGGTGGCTGCTTCTACTGGGGAATCGAC 905
                        *                                                         

consensus_4560#0      GAAATCGAGGGCGACGAAGGCGGCGACATGCTCGTCCTCGACGAGACCACCGCGGGATTC 1010
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      GACGACGACGACGAAGACGACGGCGCCATGCTCGTCCTCGACGAGACCACCACGGAGTTC 965
                                                                                  

consensus_4560#0      TCCCTCGTGACGTTCCCGGAGAACGTCCGCGAGAGCTACGACAAGCGGACGTTCCGGATC 1070
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TCGCTGGTGACGTTCCCGGACATCATCCGGGAGAACTACCACATGACGACGTTCCGGATC 1025
                                                                                  

consensus_4560#0      ATCGCCGGCGGCGACGGCGTCGCCATGCGCGTGGTCCGTGTGATAAACAACGACCTCAAG 1130
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      ATCGCCGGCGGCGACGGCGCCATGCGTGTTCTCCGCGTGATAGGCAACGACCTCAAGGTG 1085
                                                                                  

consensus_4560#0      GTGTTCGCGCAGCTCGACGGCGACGGCGAGTGGGTGCTCGAGAAGCGGGTTTGGTTGCCG 1190
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TTCACGCAGCTGGCGGGTAGCGGCGTTGAGTGGGTGCTGGAGAAGCTGGTGCGGTTGCCG 1145
                                                                                  

consensus_4560#0      GCGGCGGCACGGGGCCTGCCAGGGTACGACGAGGGGTACTTCCAGGAGCAGAACGGAGAA 1250
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      GAGGCGACGCGGGGATTGCCGGGGCACGAGGAGAGGTACTTCGAGCAGAAC------GAA 1199
                                                                                  

consensus_4560#0      GCCATCGTTGTCGCGGCGAGCGCGGCGTATGTGCTGCTGACGCCGCCGGTGGAGGACACT 1310
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      GCCATGATCGTCGCGGCGGACGCGGCGTACGTGCTCCTGACGCCGTCGGTGGAGAAGACG 1259
                                                                                  

consensus_4560#0      TGGCTCTTCTCCGTCGAGCTGGAGACGATGGCGGTGGAGCGGTGGCATGAGAGGAACAAG 1370
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TGGCTCTTCTCCGTCGAGCTGGAGACGATGACGGTGGAGCGCCACCATGAGAGGAACAAG 1319
                                                                                  

consensus_4560#0      TATGCCGGGGTGGCTTACCCCTGCGAGTTGCCATGGCCGCGGGCTTTGCAGGCTACGGAT 1430
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TACGCGGGGGTGGCTTACCCGTACGAGTTGCCTTTGCTGCGGGCTTTGCACGCGGGCGGC 1379
                                                                                  

consensus_4560#0      GCTGATCAGATTAGTGGGAGGAGACGATGCTGATGAGATGTGGATTGATTCTGGCTGGTC 1490
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      AGATATC-GATGAGAACAACGACTTGGCAACTTGGCGTTGGACGATGATATGGAATGACA 1438
                                                                                  

consensus_4560#0      CAAAACTGTTTCGACAGTTGCATGCATTCACTTTGCGTTGCATGATGTTTCAAGCGCAAT 1550
consensus_4560#2      ------------------------------------------------------------
consensus_4560#1      TTGTTTGGTTTGATATCAACTGTTCGTGCACGATCGATT--------------------- 1477
                                                                                  

consensus_4560#0      AATATTGCTGGCGGAATATTGATGC 1575
consensus_4560#2      -------------------------
consensus_4560#1      -------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)